Arcanobacterium canis (DSM 25104, CCM 7958, CCUG 61573)

Name: Arcanobacterium canis (DSM 25104, CCM 7958, CCUG 61573)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 204

Type strain

Strain Designation P6775

Culture col. no. DSM 25104 CCM 7958 CCUG 61573 CIP 110339 P6775

NCBI tax ID(s) 999183

Special Collections DSMZ CCUG CIP Literature strains

History 2011, P. Kämpfer, Inst. Angewandte Mikrobiol., Giessen, Germany: strain P6775 <- P. Kämpfer, Univ. Giessen, Germany; P6775 <- E. Prenger-Berninghoff CIP <- 2011, P. Kämpfer, Giessen Univ., Giessen, Germany: strain P6775

Links

Arcanobacterium canis P6775 is an anaerobe, Gram-positive, rod-shaped bacterium that was isolated from canine otitis externa.

Gram-positive rod-shaped anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 381143

LMG 26670,CCM 7958,CCUG 61573,CIP 110339,DSM 25104

@ref 20215

Last LPSN update 2026-02-09 11:17:49

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Actinomycetales

Family Actinomycetaceae

Genus Arcanobacterium

Species Arcanobacterium canis

Full scientific name Arcanobacterium canis Hijazin et al. 2012

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
22974	positive	1.0-2.0 µm	0.5 µm	rod-shaped
117134	positive			rod-shaped
125439					90.6

Colony morphology

62657

Incubation period2 days

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
37594	MEDIUM 45 - for Columbia agar with sheep blood		Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Sheepblood (100.000 ml)
17844	PYG MEDIUM (MODIFIED) (DSMZ Medium 104)	Medium recipe at MediaDive	Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water
17844	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
117134	CIP Medium 45	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
17844	positive	growth	37
37594	positive	growth	37
62657	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
17844	anaerobe
62657	microaerophile
117134	microaerophile

Spore formation

@ref	Spore formation	Confidence
22974
125439		98.5
125438		98.44

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68380	29016 ChEBI	arginine	-	hydrolysis	from API rID32A
22974	17634 ChEBI	D-glucose	+	builds acid from
22974	16899 ChEBI	D-mannitol	-	builds acid from
68380	16024 ChEBI	D-mannose	+	fermentation	from API rID32A
22974	16988 ChEBI	D-ribose	+	builds acid from
22974	65327 ChEBI	D-xylose	-	builds acid from
22974	28087 ChEBI	glycogen	+	builds acid from
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
22974	17716 ChEBI	lactose	+	builds acid from
22974	17306 ChEBI	maltose	+	builds acid from
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
117134	17632 ChEBI	nitrate	-	reduction
117134	16301 ChEBI	nitrite	-	reduction
68380	16634 ChEBI	raffinose	+	fermentation	from API rID32A
22974	17992 ChEBI	sucrose	+	builds acid from
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68380	35581 ChEBI	indole		from API rID32A
117134	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68380	35581 ChEBI	indole	-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68380	alanine arylamidase	-	3.4.11.2	from API rID32A
22974	alkaline phosphatase	+	3.1.3.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68380	alkaline phosphatase	+	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68380	alpha-galactosidase	+	3.2.1.22	from API rID32A
22974	alpha-glucosidase	+	3.2.1.20
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68380	alpha-glucosidase	+	3.2.1.20	from API rID32A
22974	alpha-mannosidase	+	3.2.1.24
68382	alpha-mannosidase	-	3.2.1.24	from API zym
22974	amylase	+
68380	arginine dihydrolase	-	3.5.3.6	from API rID32A
22974	beta-galactosidase	+	3.2.1.23
68382	beta-galactosidase	-	3.2.1.23	from API zym
68380	beta-galactosidase	+	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	+		from API rID32A
68382	beta-glucosidase	-	3.2.1.21	from API zym
68380	beta-glucosidase	-	3.2.1.21	from API rID32A
22974	beta-glucuronidase	+	3.2.1.31
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
22974	caseinase	-	3.4.21.50
22974	catalase	-	1.11.1.6
117134	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
22974	DNase	+
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
22974	gelatinase	-
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	-		from API rID32A
68380	histidine arylamidase	-		from API rID32A
22974	hyaluronate lyase	-	4.2.2.1
68380	L-arginine arylamidase	-		from API rID32A
68382	leucine arylamidase	+	3.4.11.1	from API zym
68380	leucine arylamidase	-	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	-	3.4.11.1	from API rID32A
68382	lipase (C 14)	-		from API zym
22974	N-acetyl-beta-glucosaminidase	+	3.2.1.52
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68380	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API rID32A
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
22974	nitrate reductase	-	1.7.99.4
117134	oxidase	-
68380	phenylalanine arylamidase	-		from API rID32A
68380	proline-arylamidase	+	3.4.11.5	from API rID32A
22974	pyrazinamidase	-	3.5.1.B15
22974	pyrrolidonyl arylamidase	-	3.4.19.3
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	-		from API rID32A
68382	trypsin	+	3.4.21.4	from API zym
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	-		from API rID32A
22974	urease	-	3.5.1.5
117134	urease	-	3.5.1.5
68380	urease	-	3.5.1.5	from API rID32A
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
117134	-	+	+	+	-	+	-	-	+	-	+	+	+	-	-	+	-	+	-	-

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
17844	-	-	+	+	+	+	-	-	-	+	+	+	-	-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Canidae (Dog)
#Host Body-Site	#Organ	#Ear

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
17844	canine otitis externa		Hessen, Giessen	Germany	DEU	Europe
62657	Canine,otitis externa	2011	Giessen/Hessen	Germany	DEU	Europe
117134	Animal, Canine otidis externa		Giessen, Hessen	Germany	DEU	Europe	2011

Taxonmaps

69479

Global distribution of 16S sequence FR846134 (>99% sequence identity) for Arcanobacterium canis from Microbeatlas

Aquatic Samples	10
Soil Samples	7
Animal Samples	584
Plant Samples
Total Samples	601

Interaction and safety

Risk assessment

@ref	Pathogenicity animal	Biosafety level	Biosafety level comment
17844	yes, in single cases	1	Risk group (German classification) According to TRBA 466
117134		2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM2962543v1 assembly for Arcanobacterium canis DSM 25104	complete	GCA_029625435	999183.3	8047025084	999183	98.78
124043	ASM4265778v1 assembly for Arcanobacterium canis CCUG 61573	contig	GCA_042657785			999183	76.15

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Arcanobacterium canis genomic DNA containing 16S rDNA-23S rDNA IGS, strain CIP 110339, isolate P6775-11	HE616814	345	999183
17844	Arcanobacterium canis partial 16S rRNA gene, type strain DSM 25104T	FR846134	1363	999183
124043	Arcanobacterium canis strain DSM 25104 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence.	OP620761	523	999183

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Arcanobacterium canis DSM 25104
NCBI: GCA_029625435

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	98.50	no
125439	motility	BacteriaNetⓘ	no	90.60	no
125439	gram_stain	BacteriaNetⓘ	positive	77.00	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	88.70	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Arcanobacterium canis DSM 25104
NCBI: GCA_029625435.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	60.16	no
125438	anaerobic	anaerobicⓘ	no	69.16	no
125438	aerobic	aerobicⓘ	no	80.62	yes
125438	spore-forming	spore-formingⓘ	no	98.44	yes
125438	thermophilic	thermophileⓘ	no	97.64	yes
125438	flagellated	motile2+ⓘ	no	87.90	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Arcanobacterium canis strain DSM 25104 isolated from an English bulldog suffering from otitis externa: complete genome sequence.	Borowiak M, Kreitlow A, Malorny B, Lammler C, Prenger-Berninghoff E, Plotz M, Abdulmawjood A.	Microbiol Resour Announc	10.1128/mra.00624-23	2024
	Genome Sequence Comparisons between Small and Large Colony Phenotypes of Equine Clinical Isolates of Arcanobacterium hippocoleae.	Ayalew LE, Mekuria ZH, Despres B, Saab ME, Ojha S.	Animals (Basel)	10.3390/ani14111609	2024
Phylogeny	Further characteristics of Arcanobacterium canis, a novel species of genus Arcanobacterium.	Sammra O, Balbutskaya A, Zhang S, Hijazin M, Nagib S, Lammler C, Abdulmawjood A, Prenger-Berninghoff E, Kostrzewa M, Timke M	Vet Microbiol	10.1016/j.vetmic.2013.09.017	2013
Phylogeny	Arcanobacterium canis sp. nov., isolated from otitis externa of a dog, and emended description of the genus Arcanobacterium Collins et al. 1983 emend. Yassin et al. 2011.	Hijazin M, Prenger-Berninghoff E, Sammra O, Alber J, Lammler C, Kampfer P, Glaeser SP, Busse HJ, Hassan AA, Abdulmawjood A, Zschock M	Int J Syst Evol Microbiol	10.1099/ijs.0.037150-0	2011

References

#17844	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25104
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#22974	Muaz Hijazin,Ellen Prenger-Berninghoff,Osama Sammra,Jörg Alber,Christoph Lämmler,Peter Kämpfer,Stefanie P. Glaeser,Hans-Jürgen Busse,Abdulwahed Ahmed Hassan,Amir Abdulmawjood,Michael Zschöck: Arcanobacterium canis sp. nov., isolated from otitis externa of a dog, and emended description of the genus Arcanobacterium Collins et al. 1983 emend. Yassin et al. 2011. IJSEM 62: 2201 - 2205 2012 ( DOI 10.1099/ijs.0.037150-0 , PubMed 22081713 )
#37594	; Curators of the CIP;
#62657	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 61573
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68380	Automatically annotated from API rID32A .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#117134	Collection of Institut Pasteur ; Curators of the CIP; CIP 110339
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Arcanobacterium canis (DSM 25104, CCM 7958, CCUG 61573)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API zym

API rID32A

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_029625435

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media