Cupriavidus metallidurans (DSM 2839, LMG 1195, CH34)

Name: Cupriavidus metallidurans (DSM 2839, LMG 1195, CH34)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2038

Type strain

Strain Designation CH34

Culture col. no. DSM 2839 LMG 1195 CH34 CIP 107179 CCUG 13724 1 more

NCBI tax ID(s) 119219

Special Collections DSMZ CCUG CIP

History DSMZ <- H.G. Schlegel <- M. Mergeay, strain CH34 (Ralstonia eutropha) CIP <- 2001, CCUG <- 1983, LMG <- 1982, M. Mergeay, Pseudomonas palleronii, strain: CH34

Links

Cupriavidus metallidurans CH34 is a facultative anaerobe, Gram-negative, motile bacterium that was isolated from decantation tank of zink factory.

Gram-negative motile rod-shaped facultative anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 694

LMG 1195,ATCC 43123,DSM 2839,LMG 18526,IAM 14785,CCUG 38400,CCUG 13724,KCTC 12956,CIP 107179,BCRC 17470,CCRC 17470,NBRC 102507,JCM 21315

@ref 20215

Last LPSN update 2026-05-29 08:25:24

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Burkholderiaceae

Genus Cupriavidus

Species Cupriavidus metallidurans

Full scientific name Cupriavidus metallidurans (Goris et al. 2001) Vandamme and Coenye 2004

Synonyms (2)

Ralstonia metallidurans
Wautersia metallidurans

BacDive ID	Other strains from **Cupriavidus metallidurans** (18)	Type strain
2030	C. metallidurans KTO2, KTO₂, DSM 6519
2039	C. metallidurans pHG27, AH, DSM 8374
138424	C. metallidurans CIP 100998
138762	C. metallidurans 1875, CIP 100007
142676	C. metallidurans CCUG 13725
142695	C. metallidurans CCUG 14151
145350	C. metallidurans CCUG 28253 B
149788	C. metallidurans CCUG 38404, LMG 5901
149789	C. metallidurans CCUG 38405, LMG 5903
151005	C. metallidurans CCUG 43015
152167	C. metallidurans CCUG 45957
153397	C. metallidurans CCUG 49472
153911	C. metallidurans CCUG 51591
153973	C. metallidurans CCUG 51806
154201	C. metallidurans CCUG 52718
154458	C. metallidurans CCUG 53695
154501	C. metallidurans CCUG 53922
154921	C. metallidurans CCUG 55714

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
120919	negative	rod-shaped
125439	negative		96.358
125438	negative		97

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
1235	MINERAL MEDIUM FOR CHEMOLITHOTROPHIC GROWTH (H-3) (DSMZ Medium 81)	Medium recipe at MediaDive	Name: MINERAL MEDIUM FOR CHEMOLITHOTROPHIC GROWTH (H-3) (DSMZ Medium 81) Composition: Agar 20.1005 g/l Na2HPO4 x 2 H2O 2.91457 g/l KH2PO4 2.31156 g/l NH4Cl 1.00503 g/l MgSO4 x 7 H2O 0.502512 g/l Ferric ammonium citrate 0.0502513 g/l CaCl2 x 2 H2O 0.0100503 g/l NaVO3 x H2O 0.00502512 g/l Calcium pantothenate 0.00251256 g/l Pyridoxine hydrochloride 0.00251256 g/l Nicotinic acid 0.00251256 g/l Thiamine-HCl x 2 H2O 0.00251256 g/l H3BO3 0.00150754 g/l CoCl2 x 6 H2O 0.00100503 g/l Riboflavin 0.000502513 g/l ZnSO4 x 7 H2O 0.000502513 g/l MnCl2 x 4 H2O 0.000150754 g/l Na2MoO4 x 2 H2O 0.000150754 g/l NiCl2 x 6 H2O 0.000100503 g/l CuCl2 x 2 H2O 5.02513e-05 g/l Vitamin B12 5.02513e-05 g/l Folic acid 1.00503e-05 g/l Biotin 5.02513e-06 g/l Distilled water
1235	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
40692	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
120919	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
1235	positive	growth	30
40692	positive	growth	30
120919	positive	growth	25-30
120919	negative	growth	5
120919	negative	growth	10
120919	negative	growth	37
120919	negative	growth	41

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
120919	facultative anaerobe
125439	obligate aerobe	96.708

Spore formation

@ref	Spore formation	Confidence
125439		99.643

Halophily

@ref	Salt	Growth	Tested relation	Concentration
120919	NaCl	positive	growth	0-4 %
120919	NaCl		growth	6 %
120919	NaCl		growth	8 %
120919	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
120919	16947 ChEBI	citrate	+	carbon source
120919	4853 ChEBI	esculin	-	hydrolysis
120919	17632 ChEBI	nitrate	+	reduction
120919	17632 ChEBI	nitrate	+	respiration
120919	16301 ChEBI	nitrite	+	reduction

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
120919	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
120919	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
120919	alcohol dehydrogenase	+	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
120919	amylase	-
68382	beta-galactosidase	-	3.2.1.23	from API zym
120919	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
120919	caseinase	-	3.4.21.50
120919	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
120919	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
120919	gelatinase	-
120919	lecithinase	-
68382	leucine arylamidase	-	3.4.11.1	from API zym
120919	lipase	-
68382	lipase (C 14)	-		from API zym
120919	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
120919	ornithine decarboxylase	+	4.1.1.17
120919	oxidase	+
120919	protease	+
68382	trypsin	-	3.4.21.4	from API zym
120919	tryptophan deaminase	-
120919	tween esterase	+
120919	urease	+	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
120919	-	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
120919	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	+	-	+	+	+	+	+	-	+	+	-	-	-	-	-	+	+	+	+	+	-	+	-	+	-	-	-	-	-	-	-	+	+	+	-	+	+	+	+	-	-	-	+	+	+	+	+	+	+	+	+	-	+	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Built environment	#Container (Reservoir)
#Engineered	#Industrial	#Engineered product
#Engineered	#Industrial	#Plant (Factory)

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
1235	decantation tank of zink factory	Belgium	BEL	Europe
120919	Environment, Waste water, zinc factory	Belgium	BEL	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
1235	1	Risk group (German classification) According to TRBA 466
120919	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM19601v1 assembly for Cupriavidus metallidurans CH34	complete	GCA_000196015	266264.9	637000230	266264	96.61

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Ralstonia sp. CH34 16S rRNA gene, strain CH34	Y10824	1493	266264
20218	Cupriavidus metallidurans strain CIP 107179 16S ribosomal RNA gene, partial sequence	EU024161	1315	119219
20218	Cupriavidus metallidurans gene for 16S ribosomal RNA, strain: DSM 2839	D87999	1462	119219
20218	Cupriavidus metallidurans gene for 16S rRNA, partial sequence, strain: NBRC 102507	AB681841	1457	119219

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM19601v1 assembly for Cupriavidus metallidurans CH34
BV-BRC: 266264.9

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.71	no
125439	gram_stain	BacteriaNetⓘ	negative	96.36	no
125439	motility	BacteriaNetⓘ	yes	73.40	no
125439	spore_formation	BacteriaNetⓘ	no	99.64	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Cupriavidus metallidurans CH34 CH34
NCBI: GCA_000196015.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	97.00	no
125438	anaerobic	anaerobicⓘ	no	97.96	yes
125438	aerobic	aerobicⓘ	yes	75.42	yes
125438	spore-forming	spore-formingⓘ	no	89.01	no
125438	thermophilic	thermophileⓘ	no	98.00	no
125438	flagellated	motile2+ⓘ	yes	82.84	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Surface Display of Multiple Metal-Binding Domains in Deinococcus radiodurans Alleviates Cadmium and Lead Toxicity in Rice.	Wang L, Wang Y, Dai S, Wang B.	Int J Mol Sci	10.3390/ijms252312570	2024
Genetics	Synthetic Biology Toolbox, Including a Single-Plasmid CRISPR-Cas9 System to Biologically Engineer the Electrogenic, Metal-Resistant Bacterium Cupriavidus metallidurans CH34.	Turco F, Garavaglia M, Van Houdt R, Hill P, Rawson FJ, Kovacs K.	ACS Synth Biol	10.1021/acssynbio.2c00130	2022
	Machine learning-based identification of key biotic and abiotic drivers of mineral weathering rate in a complex enhanced weathering experiment.	Janssens I, Servotte T, Calogiuri T, Mortier S, Niron H, Corbett T, Poetra RP, Rieder L, Van Tendeloo M, Singh A, Latre S, Vlaminck SE, Hartmann J, van Groenigen JW, Neubeck A, Vidal A, Janssens IA, Hagens M, Vicca S, Verdonck T.	Open Res Eur	10.12688/openreseurope.19252.3	2025
	Microbially-Enhanced Vanadium Mining and Bioremediation Under Micro- and Mars Gravity on the International Space Station.	Cockell CS, Santomartino R, Finster K, Waajen AC, Nicholson N, Loudon CM, Eades LJ, Moeller R, Rettberg P, Fuchs FM, Van Houdt R, Leys N, Coninx I, Hatton J, Parmitano L, Krause J, Koehler A, Caplin N, Zuijderduijn L, Mariani A, Pellari S, Carubia F, Luciani G, Balsamo M, Zolesi V, Ochoa J, Sen P, Watt JAJ, Doswald-Winkler J, Herova M, Rattenbacher B, Wadsworth J, Everroad RC, Demets R.	Front Microbiol	10.3389/fmicb.2021.641387	2021
Metabolism	Space station biomining experiment demonstrates rare earth element extraction in microgravity and Mars gravity.	Cockell CS, Santomartino R, Finster K, Waajen AC, Eades LJ, Moeller R, Rettberg P, Fuchs FM, Van Houdt R, Leys N, Coninx I, Hatton J, Parmitano L, Krause J, Koehler A, Caplin N, Zuijderduijn L, Mariani A, Pellari SS, Carubia F, Luciani G, Balsamo M, Zolesi V, Nicholson N, Loudon CM, Doswald-Winkler J, Herova M, Rattenbacher B, Wadsworth J, Craig Everroad R, Demets R.	Nat Commun	10.1038/s41467-020-19276-w	2020
Metabolism	Structural characterization of the bacterial proteasome homolog BPH reveals a tetradecameric double-ring complex with unique inner cavity properties.	Fuchs ACD, Maldoner L, Hipp K, Hartmann MD, Martin J.	J Biol Chem	10.1074/jbc.m117.815258	2018
Transcriptome	Transcriptomic responses of a simplified soil microcosm to a plant pathogen and its biocontrol agent reveal a complex reaction to harsh habitat.	Perazzolli M, Herrero N, Sterck L, Lenzi L, Pellegrini A, Puopolo G, Van de Peer Y, Pertot I.	BMC Genomics	10.1186/s12864-016-3174-4	2016
Genetics	The passive yet successful way of planktonic life: genomic and experimental analysis of the ecology of a free-living polynucleobacter population.	Hahn MW, Scheuerl T, Jezberova J, Koll U, Jezbera J, Simek K, Vannini C, Petroni G, Wu QL.	PLoS One	10.1371/journal.pone.0032772	2012
Metabolism	The Impacts of Microgravity on Bacterial Metabolism.	Sharma G, Curtis PD.	Life (Basel)	10.3390/life12060774	2022
Metabolism	Effects of spaceflight and simulated microgravity on microbial growth and secondary metabolism.	Huang B, Li DG, Huang Y, Liu CT.	Mil Med Res	10.1186/s40779-018-0162-9	2018
Pathogenicity	Mycotoxin Biodegradation Ability of the Cupriavidus Genus.	Al-Nussairawi M, Risa A, Garai E, Varga E, Szabo I, Csenki-Bakos Z, Kriszt B, Cserhati M.	Curr Microbiol	10.1007/s00284-020-02063-7	2020
	Molecular self-assembly mediates the flocculation activity of benzimidazole derivatives against E. coli.	Drewek I, Pietka A, Tran TQ, Blazhynska M, Jenistova A, Chipot C, Barth A, Surin M, Leclere P, Wattiez R, Muller RN, Stanicki D, Laurent S.	Sci Rep	10.1038/s41598-025-13837-z	2025
	The effect of bacterial growth strategies on plasmid transfer and naphthalene degradation for bioremediation.	Varner PM, Allemann MN, Michener JK, Gunsch CK.	Environ Technol Innov	10.1016/j.eti.2022.102910	2022
Phylogeny	First case of invasive human infection caused by Cupriavidus metallidurans.	Langevin S, Vincelette J, Bekal S, Gaudreau C.	J Clin Microbiol	10.1128/jcm.01947-10	2011
Genetics	Genomic Insights Into Cadmium Resistance of a Newly Isolated, Plasmid-Free Cellulomonas sp. Strain Y8.	Chen J, Wang L, Li W, Zheng X, Li X.	Front Microbiol	10.3389/fmicb.2021.784575	2021
Enzymology	Evaluation of procedures for the collection, processing, and analysis of biomolecules from low-biomass surfaces.	Kwan K, Cooper M, La Duc MT, Vaishampayan P, Stam C, Benardini JN, Scalzi G, Moissl-Eichinger C, Venkateswaran K.	Appl Environ Microbiol	10.1128/aem.02978-10	2011
Metabolism	A benzene-degrading nitrate-reducing microbial consortium displays aerobic and anaerobic benzene degradation pathways.	Atashgahi S, Hornung B, van der Waals MJ, da Rocha UN, Hugenholtz F, Nijsse B, Molenaar D, van Spanning R, Stams AJM, Gerritse J, Smidt H.	Sci Rep	10.1038/s41598-018-22617-x	2018
Metabolism	Methods for extracting biochemical information from bacterial Raman spectra: an explorative study on Cupriavidus metallidurans.	De Gelder J, De Gussem K, Vandenabeele P, De Vos P, Moens L	Anal Chim Acta	10.1016/j.aca.2006.12.050	2007
Phylogeny	Taxonomy of the genus Cupriavidus: a tale of lost and found.	Vandamme P, Coenye T	Int J Syst Evol Microbiol	10.1099/ijs.0.63247-0	2004
Phylogeny	Classification of metal-resistant bacteria from industrial biotopes as Ralstonia campinensis sp. nov., Ralstonia metallidurans sp. nov. and Ralstonia basilensis Steinle et al. 1998 emend.	Goris J, De Vos P, Coenye T, Hoste B, Janssens D, Brim H, Diels L, Mergeay M, Kersters K, Vandamme P	Int J Syst Evol Microbiol	10.1099/00207713-51-5-1773	2001

References

#1235	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2839
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#40692	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68382	Automatically annotated from API zym .
#120919	Collection of Institut Pasteur ; Curators of the CIP; CIP 107179
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Cupriavidus metallidurans (DSM 2839, LMG 1195, CH34)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Enzymes

API zym

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000196015

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media