Name: Cupriavidus metallidurans CH34
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 2038

Type strain:

Species: Cupriavidus metallidurans

Strain Designation: CH34

Culture col. no.: DSM 2839, LMG 1195

Strain history: <- H.G. Schlegel <- M. Mergeay, strain CH34 (Ralstonia eutropha)

NCBI tax ID(s): 119219 (species)

Other strains from Cupriavidus metallidurans

Section

Cupriavidus metallidurans CH34 is a mesophilic bacterium that was isolated from decantation tank of zink factory.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Burkholderiaceae*
	Genus	*Cupriavidus*
	Species	**Cupriavidus metallidurans**
	Full Scientific Name (LPSN)	Cupriavidus metallidurans (Goris et al. 2001) Vandamme and Coenye 2004

	Synonym	Wautersia metallidurans
	Synonym	Ralstonia metallidurans

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1235]

Culture medium

MINERAL MEDIUM FOR CHEMOLITHOTROPHIC GROWTH (H-3) (DSMZ Medium 81)

[Ref.: #1235]

Culture medium growth

[Ref.: #1235]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1235]

Culture medium composition

expand / minimize

[Ref.: #1235]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #1235]

Culture medium growth

[Ref.: #1235]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1235]

Culture medium composition

expand / minimize

[Ref.: #40692]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #40692]

Culture medium growth

[Ref.: #40692]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1235]			growth	30 °C
[Ref.: #40692]			growth	30 °C

[Ref.: #1235]	Temperature range	mesophilic
[Ref.: #40692]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1235]	Sample type/isolated from	decantation tank of zink factory
[Ref.: #1235]	Country	Belgium
[Ref.: #1235]	Country ISO 3 Code	BEL
[Ref.: #1235]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered	#Built environment	#Container (Reservoir)
#Engineered	#Industrial	#Engineered product
#Engineered	#Industrial	#Plant (Factory)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1235]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Ralstonia sp. CH34 16S rRNA gene, strain CH34	Y10824	1493	ENA	266264 tax ID	*
[Ref.: #20218]	Cupriavidus metallidurans strain CIP 107179 16S ribosomal RNA gene, partial sequence	EU024161	1315	ENA	119219 tax ID	*
[Ref.: #20218]	Cupriavidus metallidurans gene for 16S ribosomal RNA, strain: DSM 2839	D87999	1462	ENA	119219 tax ID	*
[Ref.: #20218]	Cupriavidus metallidurans gene for 16S rRNA, partial sequence, strain: NBRC 102507	AB681841	1457	ENA	119219 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Cupriavidus metallidurans CH34	637000230	complete	JGI IMG/M	266264 tax ID	*
[Ref.: #66792]	Cupriavidus metallidurans CH34	266264.41	plasmid	PATRIC	266264 tax ID	*
[Ref.: #66792]	Cupriavidus metallidurans CH34	266264.9	complete	PATRIC	266264 tax ID	*
[Ref.: #66792]	Cupriavidus metallidurans CH34	266264.42	plasmid	PATRIC	266264 tax ID	*
[Ref.: #66792]	Cupriavidus metallidurans CH34	266264.43	plasmid	PATRIC	266264 tax ID	*
[Ref.: #66792]	Cupriavidus metallidurans CH34	266264.44	plasmid	PATRIC	266264 tax ID	*

Availability in culture collections External links

[Ref.: #1235]

Culture collection no.

DSM 2839, LMG 1195

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Methods for extracting biochemical information from bacterial Raman spectra: an explorative study on Cupriavidus metallidurans.	De Gelder J, De Gussem K, Vandenabeele P, De Vos P, Moens L	Anal Chim Acta	10.1016/j.aca.2006.12.050	2007	*
Phylogeny	Taxonomy of the genus Cupriavidus: a tale of lost and found.	Vandamme P, Coenye T	Int J Syst Evol Microbiol	10.1099/ijs.0.63247-0	2004	*
Phylogeny	Classification of metal-resistant bacteria from industrial biotopes as Ralstonia campinensis sp. nov., Ralstonia metallidurans sp. nov. and Ralstonia basilensis Steinle et al. 1998 emend.	Goris J, De Vos P, Coenye T, Hoste B, Janssens D, Brim H, Diels L, Mergeay M, Kersters K, Vandamme P	Int J Syst Evol Microbiol	10.1099/00207713-51-5-1773	2001	*

References

#1235

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2839

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#40692 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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