Paraburkholderia denitrificans KIS30-44 is a mesophilic prokaryote that was isolated from forest soil.
mesophilic genome sequence 16S sequence| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Betaproteobacteria |
| Order Burkholderiales |
| Family Burkholderiaceae |
| Genus Paraburkholderia |
| Species Paraburkholderia denitrificans |
| Full scientific name Paraburkholderia denitrificans (Lee et al. 2013) Sawana et al. 2015 |
| Synonyms (1) |
| 17652 | Type of hemolysisgamma |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 17652 | R2A MEDIUM (DSMZ Medium 830) | Medium recipe at MediaDive | Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water |
| @ref | Growth | Type | Temperature (°C) | Range | |
|---|---|---|---|---|---|
| 17652 | positive | growth | 30 | mesophilic |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68369 | 17128 ChEBI | adipate | - | assimilation | from API 20NE |
| 68369 | 29016 ChEBI | arginine | - | hydrolysis | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | - | assimilation | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | - | fermentation | from API 20NE |
| 68369 | 16899 ChEBI | D-mannitol | - | assimilation | from API 20NE |
| 68369 | 16024 ChEBI | D-mannose | - | assimilation | from API 20NE |
| 68369 | 27689 ChEBI | decanoate | - | assimilation | from API 20NE |
| 68369 | 4853 ChEBI | esculin | - | hydrolysis | from API 20NE |
| 68369 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20NE |
| 68369 | 24265 ChEBI | gluconate | + | assimilation | from API 20NE |
| 68369 | 30849 ChEBI | L-arabinose | - | assimilation | from API 20NE |
| 68369 | 25115 ChEBI | malate | - | assimilation | from API 20NE |
| 68369 | 17306 ChEBI | maltose | - | assimilation | from API 20NE |
| 68369 | 17632 ChEBI | nitrate | + | reduction | from API 20NE |
| 68369 | 27897 ChEBI | tryptophan | - | energy source | from API 20NE |
| 68369 | 16199 ChEBI | urea | - | hydrolysis | from API 20NE |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Environmental | #Terrestrial | #Forest | |
| #Environmental | #Terrestrial | #Soil |
| @ref | Sample type | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|
| 17652 | forest soil | Dokdo Island | Republic of Korea | KOR | Asia |
| @ref | Description | Assembly level | INSDC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|
| 124043 | ASM4265570v1 assembly for Paraburkholderia denitrificans KACC 12733 | scaffold | 694025 | 65.1 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 17652 | Burkholderia denitrificans strain KIS30-44 16S ribosomal RNA gene, partial sequence | GU171384 | 1416 | 694025 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 17652 | 63.5 | high performance liquid chromatography (HPLC) |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Molecular signatures and phylogenomic analysis of the genus Burkholderia: proposal for division of this genus into the emended genus Burkholderia containing pathogenic organisms and a new genus Paraburkholderia gen. nov. harboring environmental species. | Sawana A, Adeolu M, Gupta RS. | Front Genet | 10.3389/fgene.2014.00429 | 2014 | ||
| Phylogeny | Paraburkholderia dokdonella sp. nov., isolated from a plant from the genus Campanula. | Jung MY, Kang MS, Lee KE, Lee EY, Park SJ | J Microbiol | 10.1007/s12275-019-8500-5 | 2018 | |
| Phylogeny | Burkholderia denitrificans sp. nov., isolated from the soil of Dokdo Island, Korea. | Lee CM, Weon HY, Yoon SH, Kim SJ, Koo BS, Kwon SW | J Microbiol | 10.1007/s12275-012-1554-2 | 2012 |
| #17652 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24336 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #68369 | Automatically annotated from API 20NE . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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https://doi.org/10.13145/bacdive1992.20251217.10
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BacDive in 2025: the core database for prokaryotic strain data