Arcanobacterium phocae (DSM 10002, CCUG 38888, LMG 18722)

Name: Arcanobacterium phocae (DSM 10002, CCUG 38888, LMG 18722)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 199

Type strain

Strain Designation M1590/94/3

Culture col. no. DSM 10002 CCUG 38888 LMG 18722 CIP 105740 M1590/94/3

NCBI tax ID(s) 131112

Special Collections DSMZ CCUG CIP Literature strains

History <- G. Foster, M1590/94/3 CIP <- 1998, CCUG <- 1998, DSM <- G. Foster: strain M1590/94/3

Links

Arcanobacterium phocae M1590/94/3 is a facultative anaerobe, Gram-positive, rod-shaped animal pathogen that was isolated from lung of common seal.

Gram-positive rod-shaped facultative anaerobe animal pathogen genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 12408

LMG 18722,CCUG 38888,CIP 105740,DSM 10002

@ref 20215

Last LPSN update 2026-02-09 11:17:49

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Actinomycetales

Family Actinomycetaceae

Genus Arcanobacterium

Species Arcanobacterium phocae

Full scientific name Arcanobacterium phocae Pascual Ramos et al. 1997

BacDive ID	Other strains from **Arcanobacterium phocae** (8)	Type strain
200	A. phocae M2464/93/8, DSM 10003
201	A. phocae M2546/94/1, DSM 10004, CCUG 39900
151662	A. phocae CCUG 44560
151664	A. phocae CCUG 44563
151665	A. phocae CCUG 44564
151667	A. phocae CCUG 44568
151982	A. phocae CCUG 45428
151983	A. phocae CCUG 45429

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
121800	positive	rod-shaped
125438			91
125439	positive		96.6
125439			97.3

Colony morphology

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
3774	PYG MEDIUM (MODIFIED) (DSMZ Medium 104)	Medium recipe at MediaDive	Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water
39346	MEDIUM 6 - Columbia agar with 10 % horse blood		Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
121800	CIP Medium 6	Medium recipe at CIP
121800	CIP Medium 137	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
3774	positive	growth	37
39346	positive	growth	37
121800	positive	growth	25-41
121800	negative	growth	10
121800	negative	growth	15
121800	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
121800	facultative anaerobe
125439	microaerophile	96.1

Spore formation

@ref	Spore formation	Confidence
125439		93.9

Halophily

@ref	Salt	Growth	Tested relation	Concentration
121800	NaCl	positive	growth	0-6 %
121800	NaCl		growth	8 %
121800	NaCl		growth	10 %

Murein

@ref	Murein short key	Type
3774	A11.01	A3alpha L-Lys-Gly

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68380	29016 ChEBI	arginine	-	hydrolysis	from API rID32A
22976	17057 ChEBI	cellobiose	-	builds acid from
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
22976	17634 ChEBI	D-glucose	+	builds acid from
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
22976	16899 ChEBI	D-mannitol	+	builds acid from
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68380	16024 ChEBI	D-mannose	-	fermentation	from API rID32A
22976	16988 ChEBI	D-ribose	+	builds acid from
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
22976	17924 ChEBI	D-sorbitol	-	builds acid from
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
22976	65327 ChEBI	D-xylose	-	builds acid from
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
121800	4853 ChEBI	esculin	-	hydrolysis
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
22976	5291 ChEBI	gelatin	-	hydrolysis
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
22976	17754 ChEBI	glycerol	+	builds acid from
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
22976	28087 ChEBI	glycogen	-	builds acid from
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
22976	606565 ChEBI	hippurate	-	hydrolysis
121800	606565 ChEBI	hippurate	+	hydrolysis
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
22976	30849 ChEBI	L-arabinose	-	builds acid from
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
22976	62345 ChEBI	L-rhamnose	-	builds acid from
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
22976	17716 ChEBI	lactose	+	builds acid from
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
22976	17306 ChEBI	maltose	+	builds acid from
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
22976	37684 ChEBI	mannose	-	builds acid from
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
121800	17632 ChEBI	nitrate	+	reduction
121800	17632 ChEBI	nitrate	+	respiration
121800	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
22976	16634 ChEBI	raffinose	-	builds acid from
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
22976	17814 ChEBI	salicin	-	builds acid from
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
22976	17992 ChEBI	sucrose	-	builds acid from
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
22976	27082 ChEBI	trehalose	-	builds acid from
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
121800	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite
22976	15688 ChEBI	acetoin
68380	35581 ChEBI	indole	from API rID32A
121800	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test	Voges-proskauer-test	Methylred-test
121800	15688 ChEBI	acetoin		-
121800	17234 ChEBI	glucose			+
68380	35581 ChEBI	indole	-			from API rID32A

Enzymes

@ref	Value	Activity	Ec
22976	acid phosphatase	+	3.1.3.2
68382	acid phosphatase	+	3.1.3.2	from API zym
68380	alanine arylamidase	-	3.4.11.2	from API rID32A
121800	alcohol dehydrogenase	+	1.1.1.1
22976	alkaline phosphatase	+	3.1.3.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68380	alkaline phosphatase	-	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
22976	alpha-galactosidase	+	3.2.1.22
68382	alpha-galactosidase	-	3.2.1.22	from API zym
22976	alpha-glucosidase	+	3.2.1.20
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
121800	amylase	-
22976	arginine dihydrolase	-	3.5.3.6
68380	arginine dihydrolase	-	3.5.3.6	from API rID32A
22976	beta-galactosidase	+	3.2.1.23
68382	beta-galactosidase	+	3.2.1.23	from API zym
121800	beta-galactosidase	-	3.2.1.23
68380	beta-galactosidase	+	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
22976	beta-glucosidase	-	3.2.1.21
68382	beta-glucosidase	-	3.2.1.21	from API zym
68380	beta-glucosidase	-	3.2.1.21	from API rID32A
22976	beta-glucuronidase	-	3.2.1.31
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
121800	caseinase	+	3.4.21.50
121800	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
121800	DNase	-
68382	esterase (C 4)	-		from API zym
22976	esterase lipase (C 8)	+
68382	esterase lipase (C 8)	+		from API zym
121800	gamma-glutamyltransferase	-	2.3.2.2
121800	gelatinase	+/-
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	-		from API rID32A
68380	histidine arylamidase	-		from API rID32A
68380	L-arginine arylamidase	-		from API rID32A
121800	lecithinase	-
22976	leucine arylamidase	+	3.4.11.1
68382	leucine arylamidase	+	3.4.11.1	from API zym
68380	leucine arylamidase	-	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	-	3.4.11.1	from API rID32A
121800	lipase	-
68382	lipase (C 14)	-		from API zym
121800	lysine decarboxylase	-	4.1.1.18
22976	N-acetyl-beta-glucosaminidase	+	3.2.1.52
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68380	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32A
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
22976	nitrate reductase	-	1.7.99.4
121800	ornithine decarboxylase	-	4.1.1.17
121800	oxidase	-
121800	phenylalanine ammonia-lyase	-	4.3.1.24
68380	phenylalanine arylamidase	-		from API rID32A
68380	proline-arylamidase	+	3.4.11.5	from API rID32A
121800	protease	-
22976	pyrazinamidase	-	3.5.1.B15
22976	pyrrolidonyl arylamidase	-	3.4.19.3
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	-		from API rID32A
68382	trypsin	-	3.4.21.4	from API zym
121800	tryptophan deaminase	-
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
121800	tween esterase	-
68380	tyrosine arylamidase	-		from API rID32A
22976	urease	-	3.5.1.5
121800	urease	-	3.5.1.5
68380	urease	-	3.5.1.5	from API rID32A
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
121800	-	-	-	+	-	+	-	-	-	-	+	+	-	+	-	-	-	+	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
121800	not determinedn.d.	+	-	-	-	-	-	-	-	-	+/-	+	+	+	-	-	-	-	-	-	-	-	+/-	-	-	-	-	-	-	-	-	-	+/-	-	-	-	-	-	-	-	+/-	-	-	-	-	-	-	-	-	-

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
3774	-	-	+/-	+	-	+/-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Canidae (Dog)
#Host Body-Site	#Oral cavity and airways	#Lung

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
3774	lung of common seal	Shetland Isles	United Kingdom	GBR	Europe
54530	Seal lung,common seal,Phoca vitulina		United Kingdom	GBR	Europe
121800	Common seal, lung

Taxonmaps

69479

Global distribution of 16S sequence FN562994 (>99% sequence identity) for Arcanobacterium phocae from Microbeatlas

Aquatic Samples	13
Soil Samples	1
Animal Samples	56
Plant Samples	1
Total Samples	71

Interaction and safety

Risk assessment

@ref	Pathogenicity animal	Biosafety level	Biosafety level comment
3774		2	Risk group (German classification) According to TRBA 466
121800		1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	IMG-taxon 2634166335 annotated assembly for Arcanobacterium phocae DSM 10002	chromosome	GCA_900105865	131112.3	2634166335	131112	87.81

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Arcanobacterium phocae strain DSM 10002 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence	EU194565	528		131112
20218	Arcanobacterium phocae partial 16S rRNA gene, type strain DSM 10002T	FN562994	1256		131112

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Arcanobacterium phocae DSM 10002
IMG: 2634166335

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	93.90	no
125439	motility	BacteriaNetⓘ	no	97.30	no
125439	gram_stain	BacteriaNetⓘ	positive	96.60	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	96.10	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Arcanobacterium phocae strain DSM 10002
PATRIC: 131112.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	86.03	no
125438	anaerobic	anaerobicⓘ	no	77.29	no
125438	spore-forming	spore-formingⓘ	no	89.07	no
125438	aerobic	aerobicⓘ	no	82.42	yes
125438	thermophilic	thermophileⓘ	no	92.00	yes
125438	flagellated	motile2+ⓘ	no	91.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Phenotypic and genotypic characterization of Arcanobacterium haemolyticum isolates from infections of horses.	Hassan AA, Ulbegi-Mohyla H, Kanbar T, Alber J, Lammler C, Abdulmawjood A, Zschock M, Weiss R.	J Clin Microbiol	10.1128/jcm.01933-08	2009
Phylogeny	Development of amplified 16S ribosomal DNA restriction analysis for identification of Actinomyces species and comparison with pyrolysis-mass spectrometry and conventional biochemical tests.	Hall V, O'Neill GL, Magee JT, Duerden BI.	J Clin Microbiol	10.1128/jcm.37.7.2255-2261.1999	1999
Phylogeny	Identification of Arcanobacterium phocae isolated from fur animals by phenotypic properties, by MALDI-TOF MS analysis and by detection of phocaelysin encoding gene phl as probable novel target.	Alssahen M, Sammra O, Wickhorst JP, Hassan AA, Lammler C, Saarnisto MR, Prenger-Berninghoff E, Timke M, Becker A, Abdulmawjood A	Vet Microbiol	10.1016/j.vetmic.2018.01.017	2018
Genetics	Taxonogenomics description of Arcanobacterium urinimassiliense sp. nov., a new bacterial species isolated from urine sample.	Ben Khedher M, Lo CI, Diop K, Morand A, Armstrong N, Raoult D, Fenollar F.	New Microbes New Infect	10.1016/j.nmni.2021.100854	2021
	Arcanobacterium ihumii sp. nov., Varibaculum vaginae sp. nov. and Tessaracoccus timonensis sp. nov., isolated from vaginal swabs from healthy Senegalese women.	Fall NS, Lo CI, Fournier PE, Sokhna C, Raoult D, Fenollar F, Lagier JC.	New Microbes New Infect	10.1016/j.nmni.2019.100585	2019
	'Arcanobacterium urinimassiliense' sp. nov., a new bacterium isolated from the urogenital tract.	Diop K, Morand A, Dubus JC, Fournier PE, Raoult D, Fenollar F.	New Microbes New Infect	10.1016/j.nmni.2017.03.003	2017
Phylogeny	Arcanobacterium pinnipediorum sp. nov., isolated from a harbour seal.	Sammra O, Balbutskaya A, Ulbegi-Mohyla H, Nagib S, Lammler C, Kampfer P, Glaeser SP, Golke J, Busse HJ, Prenger-Berninghoff E, Siebert U, Abdulmawjood A, Klein G	Int J Syst Evol Microbiol	10.1099/ijsem.0.000609	2015

References

#3774	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 10002
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#22976	A. F. Yassin,H. Hupfer,C. Siering,P. Schumann: Comparative chemotaxonomic and phylogenetic studies on the genus Arcanobacterium Collins et al. 1982 emend. Lehnen et al. 2006: proposal for Trueperella gen. nov. and emended description of the genus Arcanobacterium. IJSEM 61: 1265 - 1274 2011 ( DOI 10.1099/ijs.0.020032-0 , PubMed 20622055 )
#39346	; Curators of the CIP;
#54530	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 38888
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68371	Automatically annotated from API 50CH acid .
#68380	Automatically annotated from API rID32A .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#121800	Collection of Institut Pasteur ; Curators of the CIP; CIP 105740
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Arcanobacterium phocae (DSM 10002, CCUG 38888, LMG 18722)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Murein

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API zym

API 50CHac

API rID32A

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900105865

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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