Name: Brucella anthropi (S)1a
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 1879

Type strain:

Species: Brucella anthropi

Strain Designation: (S)1a

Culture col. no.: DSM 14396

Strain history: <- M. Schloter, GSF; (S)1a

NCBI tax ID(s): 529 (species)

SI-ID 113535

DSM 14396

Section

Brucella anthropi 1a is a mesophilic, motile human pathogen that was isolated from agricultural soil.

motile
human pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Brucellaceae*
	Genus	*Brucella*
	Species	**Brucella anthropi**
	Full Scientific Name (LPSN)	Brucella anthropi (Holmes et al. 1988) Hördt et al. 2020

Synonym

Ochrobactrum anthropi

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.988

[Ref.: #69480]	Motility	yes Confidence in %95.572

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5333]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #5333]

Culture medium growth

[Ref.: #5333]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5333]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5333]			growth	30 °C

[Ref.: #5333]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.998

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	adipate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68369]	D-mannitol ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-mannose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	esculin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	L-arabinose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	maltose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	N-acetylglucosamine ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	nitrate ChEBI	+	reduction	* from API 20NE
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68369]	urea ChEBI	+	hydrolysis	* from API 20NE
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Indole test
[Ref.: #68369]		indole ChEBI	-	* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #68369]	beta-glucosidase	-	3.2.1.21	* from API 20NE
[Ref.: #68369]	cytochrome oxidase	+	1.9.3.1	* from API 20NE
[Ref.: #68369]	gelatinase	-		* from API 20NE
[Ref.: #68369]	urease	+	3.5.1.5	* from API 20NE

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #5333]	23714	+	-	-	-	+	-	-	-	+	+	+	-	+	+	+	+/-	-	+	+	-	+
[Ref.: #5333]	23713	+	-	-	-	+	-	-	-	+	+	+	-	+	+	-	+	-	+	+	-	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5333]	Sample type/isolated from	agricultural soil
[Ref.: #5333]	Geographic location (country and/or sea, region)	Bavaria, Scheyern
[Ref.: #5333]	Country	Germany
[Ref.: #5333]	Country ISO 3 Code	DEU
[Ref.: #5333]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered	#Agriculture	-
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AM114400 (>99% sequence identity) for Ochrobactrum from Microbeatlas

Aquatic Samples	339
Soil Samples	432
Animal Samples	1469
Plant Samples	154
Total Samples	2394

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5333]	Pathogenicity (human)	yes
[Ref.: #5333]	Pathogenicity (animal)	yes
[Ref.: #5333]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5333]	Ochrobactrum anthropi 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, isolate 1a	AJ242578	2237	ENA	529 tax ID
[Ref.: #20218]	Ochrobactrum anthropi partial 16S rRNA gene, strain DSM 14396	AM114400	1388	ENA	529 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Brucella anthropi DSM 14396	GCA_008932785	contig	GenBank	529 tax ID	*
[Ref.: #66792]	Ochrobactrum anthropi strain DSM 14396	529.88	wgs	PATRIC	529 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Ochrobactrum anthropi strain DSM 14396 PATRIC: 529.88
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Ochrobactrum anthropi strain DSM 14396 PATRIC: 529.88
[Ref.: #69480]	gram-positive	no	98.372	no
[Ref.: #69480]	anaerobic	no	97.909	no
[Ref.: #69480]	halophile	no	91.882	no
[Ref.: #69480]	spore-forming	no	96.425	no
[Ref.: #69480]	glucose-util	yes	92.674	no
[Ref.: #69480]	motile	yes	80.9	no
[Ref.: #69480]	aerobic	yes	90.681	no
[Ref.: #69480]	thermophile	no	98.413	no
[Ref.: #69480]	flagellated	no	86.336	no
[Ref.: #69480]	glucose-ferment	no	91.758	yes

Availability in culture collections External links

[Ref.: #5333]

Culture collection no.

DSM 14396

[Ref.: #71524]

SI-ID 113535

References

#5333

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14396

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68369

Automatically annotated from API 20NE .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#71524

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID113535.1 )

* These data were automatically processed and therefore are not curated

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Ochrobactrum anthropi strain DSM 14396

Ochrobactrum anthropi strain DSM 14396

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