[Ref.: #23334] |
Sample type/isolated from |
human clinical specimen |
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[Ref.: #2871] |
Sample type/isolated from |
human clinical specimen |
* marker position based on {}
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Isolation sources categories |
#Host |
#Human |
- |
#Infection |
#Patient |
- |
#Infection |
#Medical environment |
#Clinic |
#Infection |
#Patient |
#Specimen |
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Information on genomic background e.g. entries in nucleic sequence databass Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
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[Ref.: #2871] |
Ochrobactrum anthropi partial 16S rRNA gene, type strain LMG 3331T |
AM114398 |
1388 |
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439375 tax ID |
[Ref.: #67770] |
Ochrobactrum anthropi gene for 16S rRNA, strain: IAM 14119 |
D12794 |
1436 |
|
529 tax ID |
[Ref.: #20218] |
Ochrobactrum anthropi 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, type strain LMG 3331 |
AJ867295 |
880 |
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439375 tax ID |
* |
[Ref.: #20218] |
O.anthrois internal transcribed spacer region between 16S and 23S rRNA |
X95892 |
706 |
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529 tax ID |
* |
[Ref.: #20218] |
Ochrobactrum anthropi ATCC:49188 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence |
FJ410394 |
3617 |
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439375 tax ID |
* |
[Ref.: #20218] |
Ochrobactrum anthropi strain STM 2148 16S ribosomal RNA gene, partial sequence |
AY785314 |
1401 |
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529 tax ID |
* |
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Availability in culture collections External links
[Ref.: #2871] |
Culture collection no. |
DSM 6882, Alc 37, ATCC 49188, CIP 149-70, CIP 82.115, LMG 3331, JCM 21032, CCUG 24695, CIP 149.70, IAM 14119, IFO 15819, NBRC 15819, NCTC 12168 |
- References
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#2871 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 6882
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#39032 |
; Curators of the CIP;
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#66794 |
Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg:
BRENDA, the ELIXIR core data resource in 2021: new developments and updates.
Nucleic Acids Res. 49:
D498 - D508
2020 (
DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
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#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
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#68369 |
Automatically annotated from API 20NE .
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#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
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#71523 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID88044.1 )
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- * These data were automatically processed and therefore are not curated
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