Name: Brucella anthropi DSM 6882
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 1878

Type strain:

Species: Brucella anthropi

Culture col. no.: DSM 6882, Alc 37, ATCC 49188, CIP 149-70, CIP 82.115, LMG 3331, JCM 21032, CCUG 24695, CIP 149.70, IAM 14119, IFO 15819, NBRC 15819, NCTC 12168

Strain history: IAM 14119 <-- LMG 3331 <-- M. Popoff ALC 037 <-- CIP 149.70.

NCBI tax ID(s): 529 (species)

Section

Brucella anthropi DSM 6882 is an obligate aerobe, chemoorganotroph, mesophilic human pathogen that was isolated from human clinical specimen.

Gram-negative
motile
rod-shaped
chemoorganotroph
human pathogen
mesophilic
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Brucellaceae*
	Genus	*Brucella*
	Species	**Brucella anthropi**
	Full Scientific Name (PNU)	Brucella anthropi (Holmes et al. 1988) Hördt et al. 2020

Synonym

Ochrobactrum anthropi

Information on morphological and physiological properties Morphology

[Ref.: #23334]	Gram stain	negative
[Ref.: #23334]	Cell shape	rod-shaped
[Ref.: #23334]	Motility	yes
[Ref.: #23334]	Flagellum arrangement	peritrichous

[Ref.: #23334]	Colony size	1 mm
[Ref.: #23334]	Colony shape	circular
[Ref.: #23334]	Incubation period	1 day
[Ref.: #23334]	Cultivation medium used	nutrient agar

[Ref.: #2871]	Incubation period	1-2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2871]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #2871]

Culture medium growth

[Ref.: #2871]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #2871]

Culture medium composition

expand / minimize

[Ref.: #2871]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #2871]

Culture medium growth

[Ref.: #2871]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #2871]

Culture medium composition

expand / minimize

[Ref.: #23334]

Culture medium

MacConkey

[Ref.: #23334]

Culture medium growth

[Ref.: #23334]

Culture medium

Nutrient agar (NA)

[Ref.: #23334]

Culture medium growth

[Ref.: #39032]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #39032]

Culture medium growth

[Ref.: #39032]

Culture medium composition

expand / minimize

[Ref.: #2871]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #2871]

Culture medium growth

[Ref.: #2871]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #2871]

Culture medium composition

expand / minimize

[Ref.: #2871]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #2871]

Culture medium growth

[Ref.: #2871]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #2871]

Culture medium composition

expand / minimize

	Kind of temperature		Temperature
[Ref.: #2871]		growth	25 °C
[Ref.: #2871]		growth	30 °C
[Ref.: #23334]	no	growth	42 °C
[Ref.: #23334]	no	growth	5 °C
[Ref.: #23334]		optimum	20-37 °C
[Ref.: #39032]		growth	30 °C
[Ref.: #67770]		growth	30 °C

[Ref.: #2871]	Temperature range	mesophilic
[Ref.: #23334]	Temperature range	thermophilic
[Ref.: #23334]	Temperature range	psychrophilic
[Ref.: #39032]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23334]

Oxygen tolerance

obligate aerobe

[Ref.: #23334]

Nutrition type

chemoorganotroph

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23334]	(S)-mandelic acid ChEBI	-	assimilation
[Ref.: #23334]	2-aminobenzoate ChEBI	-	assimilation
[Ref.: #23334]	2-aminobutyrate ChEBI	-	assimilation
[Ref.: #23334]	2-aminopentanoic acid ChEBI	+	assimilation
[Ref.: #23334]	2-oxogluconate	+	assimilation
[Ref.: #23334]	2-oxoglutarate ChEBI	+	assimilation
[Ref.: #23334]	3-aminobutyrate ChEBI	+	assimilation
[Ref.: #23334]	3-hydroxybenzoate ChEBI	-	assimilation
[Ref.: #23334]	3-hydroxybutyrate ChEBI	+	assimilation
[Ref.: #23334]	4-hydroxybenzoate ChEBI	+	assimilation
[Ref.: #23334]	5-aminovaleric acid ChEBI	+	assimilation
[Ref.: #23334]	5-dehydro-D-gluconate ChEBI	+	assimilation
[Ref.: #23334]	aconitate ChEBI	-	assimilation
[Ref.: #23334]	adipate ChEBI	-	assimilation
[Ref.: #68369]	adipate ChEBI	-	assimilation	* from API 20NE
[Ref.: #23334]	amygdalin ChEBI	+	assimilation
[Ref.: #23334]	arabinose ChEBI	+	builds acid from
[Ref.: #23334]	arbutin ChEBI	-	assimilation
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #23334]	azelaate ChEBI	-	assimilation
[Ref.: #23334]	benzoate ChEBI	-	assimilation
[Ref.: #23334]	beta-alanine ChEBI	+	assimilation
[Ref.: #23334]	beta-D-fucose ChEBI	-	hydrolysis
[Ref.: #23334]	betaine ChEBI	+	assimilation
[Ref.: #23334]	butyrate ChEBI	+	assimilation
[Ref.: #23334]	casein	-	degradation
[Ref.: #23334]	cellobiose ChEBI	+	assimilation
[Ref.: #23334]	cellobiose ChEBI	+	builds acid from
[Ref.: #23334]	citraconate ChEBI	-	assimilation
[Ref.: #23334]	citrate ChEBI	-	carbon source
[Ref.: #23334]	citrate ChEBI	+	assimilation
[Ref.: #23334]	creatine ChEBI	-	assimilation
[Ref.: #23334]	D-alanine ChEBI	+	assimilation
[Ref.: #23334]	D-arabinose ChEBI	+	assimilation
[Ref.: #23334]	D-arabitol ChEBI	+	assimilation
[Ref.: #23334]	D-fucose ChEBI	+	assimilation
[Ref.: #68369]	D-glucose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #23334]	D-lyxose ChEBI	+	assimilation
[Ref.: #23334]	D-malate ChEBI	+	assimilation
[Ref.: #23334]	D-tagatose ChEBI	+	assimilation
[Ref.: #23334]	D-tartrate ChEBI	-	assimilation
[Ref.: #23334]	D-xylose ChEBI	+	assimilation
[Ref.: #23334]	decanoate ChEBI	-	assimilation
[Ref.: #23334]	decanoate ChEBI	+	assimilation
[Ref.: #23334]	dna ChEBI	-	hydrolysis
[Ref.: #23334]	erythritol ChEBI	+	assimilation
[Ref.: #23334]	esculin ChEBI	-	assimilation
[Ref.: #23334]	esculin ChEBI	-	hydrolysis
[Ref.: #68369]	esculin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #23334]	ethanol ChEBI	+	builds acid from
[Ref.: #23334]	ethanolamine ChEBI	+	assimilation
[Ref.: #23334]	fructose ChEBI	+	builds acid from
[Ref.: #23334]	fumarate ChEBI	+	assimilation
[Ref.: #23334]	galactitol ChEBI	+	assimilation
[Ref.: #23334]	galactose ChEBI	+	assimilation
[Ref.: #23334]	gelatin ChEBI	-	hydrolysis
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #23334]	gentiobiose ChEBI	+	assimilation
[Ref.: #23334]	gluconate ChEBI	+	assimilation
[Ref.: #23334]	glucose ChEBI	+	builds acid from
[Ref.: #23334]	glutaric acid ChEBI	+	assimilation
[Ref.: #23334]	glycerol ChEBI	+	assimilation
[Ref.: #23334]	glycerol ChEBI	+	builds acid from
[Ref.: #23334]	glycine ChEBI	+	assimilation
[Ref.: #23334]	glycolate ChEBI	+	assimilation
[Ref.: #23334]	isobutyrate ChEBI	+	assimilation
[Ref.: #23334]	isovalerate ChEBI	+	assimilation
[Ref.: #23334]	L-2,4-diaminobutyrate ChEBI	-	assimilation
[Ref.: #23334]	L-arabinose ChEBI	+	assimilation
[Ref.: #68369]	L-arabinose ChEBI	+	assimilation	* from API 20NE
[Ref.: #23334]	L-arabitol ChEBI	-	assimilation
[Ref.: #23334]	L-arginine ChEBI	+	assimilation
[Ref.: #23334]	L-aspartate ChEBI	+	assimilation
[Ref.: #23334]	L-citrulline ChEBI	+	assimilation
[Ref.: #23334]	L-cysteine ChEBI	-	assimilation
[Ref.: #23334]	L-isoleucine ChEBI	+	assimilation
[Ref.: #23334]	L-leucine ChEBI	+	assimilation
[Ref.: #23334]	L-lysine ChEBI	+	assimilation
[Ref.: #23334]	L-malate ChEBI	+	assimilation
[Ref.: #23334]	L-methionine ChEBI	-	assimilation
[Ref.: #23334]	L-norleucine ChEBI	+	assimilation
[Ref.: #23334]	L-ornithine ChEBI	+	assimilation
[Ref.: #23334]	L-phenylalanine ChEBI	-	assimilation
[Ref.: #23334]	L-serine ChEBI	+	assimilation
[Ref.: #23334]	L-sorbose ChEBI	-	assimilation
[Ref.: #23334]	L-tryptophan ChEBI	-	assimilation
[Ref.: #23334]	L-tyrosine ChEBI	-	assimilation
[Ref.: #23334]	L-valine ChEBI	+	assimilation
[Ref.: #23334]	L-xylose ChEBI	-	assimilation
[Ref.: #23334]	lactose ChEBI	-	assimilation
[Ref.: #23334]	lactose ChEBI	-	builds acid from
[Ref.: #68369]	malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #23334]	maleic acid ChEBI	-	assimilation
[Ref.: #23334]	malonate ChEBI	-	assimilation
[Ref.: #23334]	maltose ChEBI	+	assimilation
[Ref.: #23334]	maltose ChEBI	+	builds acid from
[Ref.: #68369]	maltose ChEBI	+	assimilation	* from API 20NE
[Ref.: #23334]	mannitol ChEBI	+	assimilation
[Ref.: #23334]	mannitol ChEBI	+	builds acid from
[Ref.: #23334]	melezitose ChEBI	-	assimilation
[Ref.: #23334]	melibiose ChEBI	-	assimilation
[Ref.: #23334]	meso-tartrate ChEBI	-	assimilation
[Ref.: #23334]	methyl alpha-D-glucopyranoside ChEBI	-	hydrolysis
[Ref.: #23334]	methyl alpha-D-mannoside ChEBI	-	assimilation
[Ref.: #23334]	methyl beta-D-galactoside ChEBI	-	hydrolysis
[Ref.: #23334]	myo-inositol ChEBI	+	assimilation
[Ref.: #23334]	myo-inositol ChEBI	+	builds acid from
[Ref.: #23334]	N-acetylglucosamine ChEBI	+	assimilation
[Ref.: #68369]	N-acetylglucosamine ChEBI	+	assimilation	* from API 20NE
[Ref.: #23334]	nitrate ChEBI	+	reduction
[Ref.: #68369]	nitrate ChEBI	+	reduction	* from API 20NE
[Ref.: #23334]	nonanoate ChEBI	-	assimilation
[Ref.: #23334]	oxalate ChEBI	-	assimilation
[Ref.: #23334]	phenylacetate ChEBI	-	assimilation
[Ref.: #23334]	phenylalanine ChEBI	-	degradation
[Ref.: #23334]	propionate ChEBI	+	assimilation
[Ref.: #23334]	pyruvate ChEBI	+	assimilation
[Ref.: #23334]	raffinose ChEBI	-	assimilation
[Ref.: #23334]	raffinose ChEBI	-	builds acid from
[Ref.: #23334]	rhamnose ChEBI	+	assimilation
[Ref.: #23334]	rhamnose ChEBI	+	builds acid from
[Ref.: #23334]	ribitol ChEBI	+	assimilation
[Ref.: #23334]	ribitol ChEBI	+	builds acid from
[Ref.: #23334]	ribose ChEBI	+	assimilation
[Ref.: #23334]	salicin ChEBI	-	assimilation
[Ref.: #23334]	salicin ChEBI	-	builds acid from
[Ref.: #23334]	sarcosine ChEBI	+	assimilation
[Ref.: #23334]	sebacic acid ChEBI	-	assimilation
[Ref.: #23334]	sorbitol ChEBI	+	assimilation
[Ref.: #23334]	sorbitol ChEBI	+	builds acid from
[Ref.: #23334]	starch ChEBI	-	assimilation
[Ref.: #23334]	starch ChEBI	-	hydrolysis
[Ref.: #23334]	suberic acid ChEBI	-	assimilation
[Ref.: #23334]	succinate ChEBI	+	assimilation
[Ref.: #23334]	sucrose ChEBI	+	assimilation
[Ref.: #23334]	sucrose ChEBI	+	builds acid from
[Ref.: #23334]	trehalose ChEBI	+	assimilation
[Ref.: #23334]	trehalose ChEBI	+	builds acid from
[Ref.: #23334]	tributyrin ChEBI	+	hydrolysis
[Ref.: #23334]	trigonelline ChEBI	-	assimilation
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #23334]	turanose ChEBI	+	assimilation
[Ref.: #23334]	tween 20 ChEBI	-	hydrolysis
[Ref.: #23334]	tween 80 ChEBI	-	hydrolysis
[Ref.: #23334]	tyrosine ChEBI	-	hydrolysis
[Ref.: #68369]	urea ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #23334]	valerate ChEBI	+	assimilation
[Ref.: #23334]	xylitol ChEBI	-	assimilation
[Ref.: #23334]	xylose ChEBI	+	builds acid from
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity
[Ref.: #23334]	carbenicillin ChEBI	yes
[Ref.: #23334]	co-trimoxazole ChEBI	yes
[Ref.: #23334]	nalidixic acid ChEBI	yes
[Ref.: #23334]	tetracycline ChEBI	yes

	Metabolite
[Ref.: #23334]	hydrogen sulfide ChEBI
[Ref.: #23334]	indole ChEBI
[Ref.: #68369]	indole ChEBI	* from API 20NE
[Ref.: #23334]	polyhydroxybutyrate ChEBI

	Physiological tests	Metabolite	Indole test	Citrate test
[Ref.: #23334]		citrate ChEBI		-
[Ref.: #68369]		indole ChEBI	-		* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #23334]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #23334]	alpha-fucosidase	-	3.2.1.51
[Ref.: #23334]	alpha-galactosidase	-	3.2.1.22
[Ref.: #23334]	alpha-glucosidase	-	3.2.1.20
[Ref.: #23334]	alpha-mannosidase	-	3.2.1.24
[Ref.: #23334]	arginine dihydrolase	-	3.5.3.6
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #23334]	beta-galactosidase	-	3.2.1.23
[Ref.: #23334]	beta-glucosidase	-	3.2.1.21
[Ref.: #68369]	beta-glucosidase	-	3.2.1.21	* from API 20NE
[Ref.: #23334]	beta-glucuronidase	-	3.2.1.31
[Ref.: #23334]	catalase	+	1.11.1.6
[Ref.: #23334]	cystine arylamidase	-	3.4.11.3
[Ref.: #23334]	cytochrome oxidase	+	1.9.3.1
[Ref.: #23334]	esterase lipase (C 8)	-
[Ref.: #23334]	gelatinase	-
[Ref.: #68369]	gelatinase	-		* from API 20NE
[Ref.: #23334]	lecithinase	-
[Ref.: #23334]	lipase (C 14)	-
[Ref.: #23334]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #23334]	naphthol-AS-BI-phosphohydrolase	-
[Ref.: #23334]	phosphatase	-
[Ref.: #23334]	urease	+	3.5.1.5
[Ref.: #68369]	urease	+	3.5.1.5	* from API 20NE
[Ref.: #23334]	valine arylamidase	-
	Only first 10 entries are displayed. Click here to see all.

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #2871]	22403	+	-	-	-	+	-	-	-	+	+	+	+	+	+	+	+	-	+	+	-	+
[Ref.: #2871]	20974	+	-	-	-	+	-	-	-	+	+	-	-	+	+	-	-	-	+	+/-	-	+/-
[Ref.: #2871]	20973	+	-	-	-	+	-	-	-	+	+	+	+/-	+	+	+/-	+	-	+	+/-	-	+

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	Entner Doudoroff pathway	100	10 of 10
[Ref.: #66794]	threonine metabolism	100	10 of 10
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	butanoate fermentation	100	4 of 4
[Ref.: #66794]	valine metabolism	100	9 of 9
[Ref.: #66794]	ketogluconate metabolism	100	8 of 8
[Ref.: #66794]	quinate degradation	100	2 of 2
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	biotin biosynthesis	100	4 of 4
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	pentose phosphate pathway	100	11 of 11
[Ref.: #66794]	aerobactin biosynthesis	100	1 of 1
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	lactate fermentation	100	4 of 4
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	denitrification	100	2 of 2
[Ref.: #66794]	sulfopterin metabolism	100	4 of 4
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	ribulose monophosphate pathway	100	2 of 2
[Ref.: #66794]	glycolate and glyoxylate degradation	100	6 of 6
[Ref.: #66794]	aminopropanol phosphate biosynthesis	100	2 of 2
[Ref.: #66794]	propanol degradation	100	7 of 7
[Ref.: #66794]	ubiquinone biosynthesis	100	7 of 7
[Ref.: #66794]	gluconeogenesis	100	8 of 8
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	tetrahydrofolate metabolism	100	14 of 14
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	C4 and CAM-carbon fixation	100	8 of 8
[Ref.: #66794]	photosynthesis	92.86	13 of 14
[Ref.: #66794]	vitamin B12 metabolism	91.18	31 of 34
[Ref.: #66794]	proline metabolism	90.91	10 of 11
[Ref.: #66794]	propionate fermentation	90	9 of 10
[Ref.: #66794]	lipid A biosynthesis	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	d-mannose degradation	88.89	8 of 9
[Ref.: #66794]	serine metabolism	88.89	8 of 9
[Ref.: #66794]	allantoin degradation	88.89	8 of 9
[Ref.: #66794]	4-hydroxymandelate degradation	88.89	8 of 9
[Ref.: #66794]	NAD metabolism	88.89	16 of 18
[Ref.: #66794]	aspartate and asparagine metabolism	88.89	8 of 9
[Ref.: #66794]	isoleucine metabolism	87.5	7 of 8
[Ref.: #66794]	pyrimidine metabolism	86.67	39 of 45
[Ref.: #66794]	flavin biosynthesis	86.67	13 of 15
[Ref.: #66794]	glutamate and glutamine metabolism	85.71	24 of 28
[Ref.: #66794]	citric acid cycle	85.71	12 of 14
[Ref.: #66794]	reductive acetyl coenzyme A pathway	85.71	6 of 7
[Ref.: #66794]	leucine metabolism	84.62	11 of 13
[Ref.: #66794]	vitamin B1 metabolism	84.62	11 of 13
[Ref.: #66794]	alanine metabolism	82.76	24 of 29
[Ref.: #66794]	purine metabolism	81.91	77 of 94
[Ref.: #66794]	degradation of sugar alcohols	81.25	13 of 16
[Ref.: #66794]	lipoate biosynthesis	80	4 of 5
[Ref.: #66794]	cellulose degradation	80	4 of 5
[Ref.: #66794]	creatinine degradation	80	4 of 5
[Ref.: #66794]	myo-inositol biosynthesis	80	8 of 10
[Ref.: #66794]	phenylacetate degradation (aerobic)	80	4 of 5
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	3-chlorocatechol degradation	80	4 of 5
[Ref.: #66794]	degradation of pentoses	78.57	22 of 28
[Ref.: #66794]	glutathione metabolism	78.57	11 of 14
[Ref.: #66794]	heme metabolism	78.57	11 of 14
[Ref.: #66794]	CO2 fixation in Crenarchaeota	77.78	7 of 9
[Ref.: #66794]	molybdenum cofactor biosynthesis	77.78	7 of 9
[Ref.: #66794]	methionine metabolism	76.92	20 of 26
[Ref.: #66794]	phenylalanine metabolism	76.92	10 of 13
[Ref.: #66794]	lysine metabolism	76.19	32 of 42
[Ref.: #66794]	degradation of sugar acids	76	19 of 25
[Ref.: #66794]	histidine metabolism	75.86	22 of 29
[Ref.: #66794]	oxidative phosphorylation	75.82	69 of 91
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	arginine metabolism	75	18 of 24
[Ref.: #66794]	CMP-KDO biosynthesis	75	3 of 4
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	vitamin B6 metabolism	72.73	8 of 11
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	tryptophan metabolism	71.05	27 of 38
[Ref.: #66794]	urea cycle	69.23	9 of 13
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	nitrate assimilation	66.67	6 of 9
[Ref.: #66794]	selenocysteine biosynthesis	66.67	4 of 6
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	cyanate degradation	66.67	2 of 3
[Ref.: #66794]	L-lactaldehyde degradation	66.67	2 of 3
[Ref.: #66794]	methane metabolism	66.67	2 of 3
[Ref.: #66794]	non-pathway related	65.79	25 of 38
[Ref.: #66794]	glycolysis	64.71	11 of 17
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	dTDPLrhamnose biosynthesis	62.5	5 of 8
[Ref.: #66794]	isoprenoid biosynthesis	61.54	16 of 26
[Ref.: #66794]	sulfate reduction	61.54	8 of 13
[Ref.: #66794]	lipid metabolism	61.29	19 of 31
[Ref.: #66794]	cysteine metabolism	61.11	11 of 18
[Ref.: #66794]	degradation of hexoses	61.11	11 of 18
[Ref.: #66794]	4-hydroxyphenylacetate degradation	60	6 of 10
[Ref.: #66794]	gallate degradation	60	3 of 5
[Ref.: #66794]	vitamin K metabolism	60	3 of 5
[Ref.: #66794]	ascorbate metabolism	59.09	13 of 22
[Ref.: #66794]	tyrosine metabolism	57.14	8 of 14
[Ref.: #66794]	phenol degradation	55	11 of 20
[Ref.: #66794]	metabolism of disaccharids	54.55	6 of 11
[Ref.: #66794]	3-phenylpropionate degradation	53.33	8 of 15
[Ref.: #66794]	polyamine pathway	52.17	12 of 23
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	cyclohexanol degradation	50	2 of 4
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	50	6 of 12
[Ref.: #66794]	kanosamine biosynthesis II	50	1 of 2
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	mannosylglycerate biosynthesis	50	1 of 2
[Ref.: #66794]	coenzyme M biosynthesis	50	5 of 10
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	46.15	6 of 13
[Ref.: #66794]	d-xylose degradation	45.45	5 of 11
[Ref.: #66794]	androgen and estrogen metabolism	43.75	7 of 16
[Ref.: #66794]	ethylmalonyl-CoA pathway	40	2 of 5
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	glycogen metabolism	40	2 of 5
[Ref.: #66794]	metabolism of amino sugars and derivatives	40	2 of 5
[Ref.: #66794]	carnitine metabolism	37.5	3 of 8
[Ref.: #66794]	cholesterol biosynthesis	36.36	4 of 11
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	arachidonic acid metabolism	33.33	6 of 18
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	pantothenate biosynthesis	33.33	2 of 6
[Ref.: #66794]	enterobactin biosynthesis	33.33	1 of 3
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	phenylpropanoid biosynthesis	30.77	4 of 13
[Ref.: #66794]	benzoyl-CoA degradation	28.57	2 of 7
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	alginate biosynthesis	25	1 of 4
[Ref.: #66794]	carotenoid biosynthesis	22.73	5 of 22
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #23334]	Sample type/isolated from	human clinical specimen

[Ref.: #2871]	Sample type/isolated from	human clinical specimen
* marker position based on {}

Isolation sources categories

#Host	#Human	-
#Infection	#Patient	-
#Infection	#Medical environment	#Clinic
#Infection	#Patient	#Specimen

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AM114398 (>99% sequence identity) for Ochrobactrum from Microbeatlas

Aquatic Samples	339
Soil Samples	432
Animal Samples	1469
Plant Samples	154
Total Samples	2394

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2871]	Pathogenicity (human)	yes
[Ref.: #2871]	Pathogenicity (animal)	yes
[Ref.: #2871]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Ochrobactrum anthropi 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, type strain LMG 3331	AJ867295	880	ENA	439375 tax ID	*
[Ref.: #20218]	Ochrobactrum anthropi strain STM 2148 16S ribosomal RNA gene, partial sequence	AY785314	1401	ENA	529 tax ID	*
[Ref.: #20218]	Ochrobactrum anthropi ATCC:49188 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	FJ410394	3617	ENA	439375 tax ID	*
[Ref.: #20218]	O.anthrois internal transcribed spacer region between 16S and 23S rRNA	X95892	706	ENA	529 tax ID	*
[Ref.: #2871]	Ochrobactrum anthropi partial 16S rRNA gene, type strain LMG 3331T	AM114398	1388	ENA	439375 tax ID
[Ref.: #67770]	Ochrobactrum anthropi gene for 16S rRNA, strain: IAM 14119	D12794	1436	ENA	529 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Brucella anthropi ATCC 49188 ATCC 49188	GCA_000017405	complete	GenBank	439375 tax ID	*
[Ref.: #66792]	Ochrobactrum anthropi ATCC 49188	439375.63	wgs	PATRIC	439375 tax ID	*
[Ref.: #66792]	Ochrobactrum anthropi ATCC 49188	439375.59	plasmid	PATRIC	439375 tax ID	*
[Ref.: #66792]	Ochrobactrum anthropi ATCC 49188	439375.57	plasmid	PATRIC	439375 tax ID	*
[Ref.: #66792]	Ochrobactrum anthropi ATCC 49188	439375.58	plasmid	PATRIC	439375 tax ID	*
[Ref.: #66792]	Ochrobactrum anthropi ATCC 49188	439375.60	plasmid	PATRIC	439375 tax ID	*

[Ref.: #2871]	GC-content	57.2 mol%
[Ref.: #23334]	GC-content	57.00 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #2871]

Culture collection no.

DSM 6882, Alc 37, ATCC 49188, CIP 149-70, CIP 82.115, LMG 3331, JCM 21032, CCUG 24695, CIP 149.70, IAM 14119, IFO 15819, NBRC 15819, NCTC 12168

[Ref.: #20218]

Associated Passport(s) in StrainInfo

379602, 403685, 389567, 389568, 379601, 378512

References

#2871

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6882

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#23334

B. HOLMES, M. POPOFF, M. KIREDJIAN, K. KERSTERS: Ochrobactrum anthropi gen. nov., sp. nov. from Human Clinical Specimens and Previously Known as Group Vd. IJSEM 38: 406 - 416 1988 ( DOI 10.1099/00207713-38-4-406 )

#39032 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68369

Automatically annotated from API 20NE .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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