Name: Brevibacterium aurantiacum KC
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 1863

Type strain:

Species: Brevibacterium aurantiacum

Strain Designation: KC

Culture col. no.: DSM 20426, ATCC 9175, NCDO 739, NCIB 8546, JCM 2590, BCRC 10379, CCUG 12159, CCUG 23574, CECT 76, CIP 63.12, IAM 1902, IFO 12171, IMET 10996, KCTC 3084, LMG 22546, NBRC 12171, NCIMB 8546, VKM Ac-2111

Strain history: CIP <- 1963, N. Grecz, Brevibacterium linens <- ATCC <- R.S. Breed: strain KC

NCBI tax ID(s): 273384 (species)

SI-ID 92599

ATCC 9175, NCIB 8546, CCUG 12159, NCDO 739, CCUG 23574, DSM 20426, IAM 1902, IMET 10996, JCM 2590, CCRC 10379, KCTC 3084, NCIMB 8546, IFO12171, VKM Ac-2111, CECT 76, NCFB 739, NBRC 12171, LMG 22546, BCRC 10379, NCIM 2149, CIP 63.12

Other strains from Brevibacterium aurantiacum

B. aurantiacum 56i, CIP 63.11
B. aurantiacum JCM 20298, ATCC 9174, IAM 1901, ...

Section

Brevibacterium aurantiacum KC is an obligate aerobe, mesophilic, Gram-positive bacterium that was isolated from camembert cheese.

Gram-positive
rod-shaped
mesophilic
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Brevibacteriaceae*
	Genus	*Brevibacterium*
	Species	**Brevibacterium aurantiacum**
	Full Scientific Name (LPSN)	Brevibacterium aurantiacum Gavrish et al. 2005

Information on morphological and physiological properties Morphology

[Ref.: #116556]	Gram stain	positive

[Ref.: #116556]	Cell shape	rod-shaped

[Ref.: #116556]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8805]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #8805]

Culture medium growth

[Ref.: #8805]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8805]

Culture medium composition

expand / minimize

[Ref.: #33417]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #33417]

Culture medium growth

[Ref.: #33417]

Culture medium composition

expand / minimize

[Ref.: #116556]

Culture medium

CIP Medium 3

[Ref.: #116556]

Culture medium growth

[Ref.: #116556]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #116556]

Culture medium

CIP Medium 72

[Ref.: #116556]

Culture medium growth

[Ref.: #116556]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #8805]	growth	30 °C
[Ref.: #33417]	growth	30 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #8805]	Temperature range	mesophilic
[Ref.: #33417]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #116556]

Oxygen tolerance

obligate aerobe

[Ref.: #116556]

Ability of spore formation

[Ref.: #8805]	Name of produced compound	flavin-adenine dinucleotide
[Ref.: #20216]	Name of produced compound	Flavin-adenine dinucleotide

[Ref.: #8805]	Murein short key	A31
[Ref.: #8805]	Murein types	A1gamma m-Dpm-direct

[Ref.: #67770]

Observation

quinones: MK-8(H₂)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68371]	amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	cellobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fructose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-galactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-glucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	esculin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gentiobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	maltose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #116556]	nitrate ChEBI	-	reduction
[Ref.: #116556]	nitrite ChEBI	-	reduction
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	sucrose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	trehalose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #67770]		flavin adenine dinucleotide	yes
[Ref.: #116556]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #67770]	carboxylesterase		3.1.1.1
[Ref.: #116556]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #116556]	oxidase	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #116556]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #8805]	14652	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #116556]	13030	-	-	+	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8805]	Sample type/isolated from	camembert cheese

[Ref.: #67770]	Sample type/isolated from	Camembert cheese

[Ref.: #116556]	Sample type/isolated from	Food, Cheese, Camembert
* marker position based on {}

Isolation sources categories

#Engineered	#Food production	#Dairy product
#Host	#Fungi	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8805]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #116556]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Brevibacterium linens strain ATCC 9175 16S-23S ribosomal intergenic spacer sequence	U59268	408	ENA	1703 tax ID	*
[Ref.: #20218]	Brevibacterium linens DSM 20426 16S ribosomal RNA gene, partial sequence	AY017067	644	ENA	1703 tax ID	*
[Ref.: #20218]	Brevibacterium aurantiacum gene for 16S ribosomal RNA	X76566	1474	ENA	273384 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Brevibacterium aurantiacum NBRC 12171	GCA_006539005	contig	GenBank	273384 tax ID
[Ref.: #67770]	Brevibacterium aurantiacum ATCC 9175	GCA_900169065	contig	GenBank	273384 tax ID
[Ref.: #66792]	Brevibacterium aurantiacum strain ATCC 9175	273384.30	wgs	PATRIC	273384 tax ID	*
[Ref.: #66792]	Brevibacterium aurantiacum strain NBRC 12171	273384.55	wgs	PATRIC	273384 tax ID	*
[Ref.: #66792]	Brevibacterium linens DSM 20426	2563366675	draft	JGI IMG/M	1703 tax ID	*
[Ref.: #66792]	Brevibacterium aurantiacum ATCC9175	2600255379	draft	JGI IMG/M	273384 tax ID	*

[Ref.: #8805]	GC-content	60.2 mol%
[Ref.: #67770]	GC-content	62.5 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Brevibacterium aurantiacum strain ATCC 9175 PATRIC: 273384.30
[Ref.: #69480]	motile	no	90.583	no
[Ref.: #69480]	gram-positive	yes	91.602	no
[Ref.: #69480]	anaerobic	no	99.566	no
[Ref.: #69480]	halophile	yes	68.078	no
[Ref.: #69480]	spore-forming	no	88.822	no
[Ref.: #69480]	glucose-util	yes	86.571	no
[Ref.: #69480]	aerobic	yes	95.475	no
[Ref.: #69480]	flagellated	no	97.572	no
[Ref.: #69480]	thermophile	no	99.307	yes
[Ref.: #69480]	glucose-ferment	no	93.21	no

Availability in culture collections External links

[Ref.: #8805]

Culture collection no.

DSM 20426, ATCC 9175, NCDO 739, NCIB 8546, JCM 2590, BCRC 10379, CCUG 12159, CCUG 23574, CECT 76, CIP 63.12, IAM 1902, IFO 12171, IMET 10996, KCTC 3084, LMG 22546, NBRC 12171, NCIMB 8546, VKM Ac-2111

[Ref.: #71508]

SI-ID 92599

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Teichoic, teichulosonic and teichuronic acids in the cell wall of Brevibacterium aurantiacum VKM Ac-2111(capital TE, Cyrillic).	Shashkov AS, Potekhina NV, Senchenkova SN, Evtushenko LI	Carbohydr Res	10.1016/j.carres.2015.12.007	2015	*
Metabolism	Global regulation of the response to sulfur availability in the cheese-related bacterium Brevibacterium aurantiacum.	Forquin MP, Hebert A, Roux A, Aubert J, Proux C, Heilier JF, Landaud S, Junot C, Bonnarme P, Martin-Verstraete I	Appl Environ Microbiol	10.1128/AEM.01708-10	2010	*
Phylogeny	Identification of brevibacteriaceae by multilocus sequence typing and comparative genomic hybridization analyses.	Forquin MP, Duvergey H, Proux C, Loux V, Mounier J, Landaud S, Coppee JY, Gibrat JF, Bonnarme P, Martin-Verstraete I, Vallaeys T	Appl Environ Microbiol	10.1128/AEM.00224-09	2009	*
Metabolism	Deacidification by Debaryomyces hansenii of smear soft cheeses ripened under controlled conditions: relative humidity and temperature influences.	Bonaiti C, Leclercq-Perlat MN, Latrille E, Corrieu G	J Dairy Sci	10.3168/jds.S0022-0302(04)73538-9	2004	*
Phylogeny	[Three new species of brevibacteria--Brevibacterium antiquum sp. nov., Brevibacterium aurantiacum sp. nov. and Brevibacterium permense sp. nov].	Gavrish EIu, Krauzova VI, Potekhina NV, Karasev SG, Plotnikova EG, Altyntseva OV, Korosteleva LA, Evtushenko LI	Mikrobiologiia		2004	*

References

#8805

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20426

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#33417 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#71508

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID92599.1 )

#116556 Collection of Institut Pasteur ; Curators of the CIP; CIP 63.12
* These data were automatically processed and therefore are not curated

Change proposal

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Brevibacterium aurantiacum strain ATCC 9175

Change proposal

Change proposal