[Ref.: #2108] |
Sample type/isolated from |
surface water or mud |
* marker position based on {}
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Isolation sources categories |
#Environmental |
#Terrestrial |
#Mud (Sludge) |
#Environmental |
#Aquatic |
#Surface water |
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Information on genomic background e.g. entries in nucleic sequence databass Sequence information
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16S Sequence information: |
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Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #2108] |
Rhodopseudomonas pseudopalustris gene for 16S rRNA, partial sequence, strain: DSM 123 |
AB498818 |
1484 |
|
1513892 tax ID |
[Ref.: #20218] |
Rhodopseudomonas pseudopalustris gene for 16S ribosomal RNA, partial sequence, strain: NBRC 100419 |
AB353097 |
1396 |
|
1513892 tax ID |
* |
[Ref.: #20218] |
Rhodopseudomonas pseudopalustris gene for 16S ribosomal RNA, partial sequence, strain: DSM 123 |
AB175650 |
1439 |
|
1513892 tax ID |
* |
[Ref.: #20218] |
Rhodopseudomonas pseudopalustris gene for 16S ribosomal RNA, partial sequence |
AB275664 |
1418 |
|
1513892 tax ID |
* |
[Ref.: #20218] |
Rhodopseudomonas pseudopalustris genes for 16S rRNA, 16S-23S ribosomal RNA intergeic spacer, tRNA-Ile, tRNA-Ala, 23S rRNA, partial and complete sequence, strain: DSM 123 |
AB498828 |
866 |
|
1513892 tax ID |
* |
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Genome sequence information: |
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Sequence accession description |
Seq. accession number |
Assembly level |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #66792] |
Rhodopseudomonas pseudopalustris DSM 123 |
GCA_900110435 |
scaffold |
|
1513892 tax ID |
* |
[Ref.: #66792] |
Rhodopseudomonas pseudopalustris strain DSM 123 |
1513892.5 |
wgs |
|
1513892 tax ID |
* |
[Ref.: #66792] |
Rhodopseudomonas pseudopalustris DSM 123 |
2671180228 |
draft |
|
1513892 tax ID |
* |
|
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Availability in culture collections External links
[Ref.: #2108] |
Culture collection no. |
DSM 123, NBRC 100419, ATH 2.1.6 (, van Niel ATH 2.1.6, ATCC 17001 |
[Ref.: #71473] |
SI-ID 12655
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* |
|
Literature: |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Biotechnology |
Influence of supplemented nutrients in tequila vinasses for hydrogen and polyhydroxybutyrate production by photofermentation with Rhodopseudomonas pseudopalustris. |
Franco-Leon JJ, Arriola-Guevara E, Suarez-Hernandez LA, Toriz G, Guatemala-Morales G, Corona-Gonzalez RI |
Bioresour Technol |
10.1016/j.biortech.2021.124865 |
2021 |
* |
Phylogeny |
Descriptions of Rhodopseudomonas parapalustris sp. nov., Rhodopseudomonas harwoodiae sp. nov. and Rhodopseudomonas pseudopalustris sp. nov., and emended description of Rhodopseudomonas palustris. |
Ramana VV, Chakravarthy SK, Raj PS, Kumar BV, Shobha E, Ramaprasad EVV, Sasikala C, Ramana CV |
Int J Syst Evol Microbiol |
10.1099/ijs.0.026815-0 |
2011 |
* |
|
- References
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#2108 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 123
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#35558 |
; Curators of the CIP;
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#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
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#71473 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID12655.1 )
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- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
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