Afifella sp. (DSM 8319, ATCC 35601)

Name: Afifella sp. (DSM 8319, ATCC 35601)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1824

Type strain

Culture col. no. DSM 8319 ATCC 35601

NCBI tax ID(s) 1872409

Special Collections DSMZ

History <- ATCC <- H. Gest, HG/JF

Links

DSM 8319 is an anaerobe bacterium that was isolated from laminated mat.

anaerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 41187

ATCC 35601,DSM 8319

@ref 20215

Last LPSN update 2026-02-09 11:18:11

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Hyphomicrobiales

Family Afifellaceae

Genus Afifella

Full scientific name Afifella Urdiain et al. 2009

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
3253	CENTENUM MEDIUM (DSMZ Medium 650)		Medium recipe at MediaDive	Name: CENTENUM MEDIUM (DSMZ Medium 650) Composition: Yeast extract 10.0 g/l Pyruvate 1.741 g/l K2HPO4 1.0 g/l MgSO4 0.5 g/l Vitamin B12 2e-05 g/l Tap water
3253	RHODOSPIRILLACEAE MEDIUM (modified) (DSMZ Medium 27)		Medium recipe at MediaDive	Name: RHODOSPIRILLACEAE MEDIUM (modified) (DSMZ Medium 27) Composition: Disodium succinate 1.0 g/l KH2PO4 0.5 g/l Ammonium acetate 0.5 g/l NaCl 0.4 g/l NH4Cl 0.4 g/l MgSO4 x 7 H2O 0.4 g/l Yeast extract 0.3 g/l L-Cysteine HCl 0.3 g/l CaCl2 x 2 H2O 0.05 g/l Fe(III) citrate 0.005 g/l Resazurin 0.005 g/l H3BO3 0.0003 g/l CoCl2 x 6 H2O 0.0002 g/l ZnSO4 x 7 H2O 0.0001 g/l MnCl2 x 4 H2O 3e-05 g/l Na2MoO4 x 2 H2O 3e-05 g/l NiCl2 x 6 H2O 2e-05 g/l CuCl2 x 2 H2O 1e-05 g/l Vitamin B12 Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
3253	positive	growth	30

Physiology and metabolism

Oxygen tolerance

3253

Oxygen toleranceanaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Industrial	#Engineered product

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
3253	laminated mat	Baja	Mexico	MEX	North America

Taxonmaps

69479

Global distribution of 16S sequence D30791 (>99% sequence identity) for Hyphomicrobiales from Microbeatlas

Aquatic Samples	820
Soil Samples	981
Animal Samples	275
Plant Samples	78
Total Samples	2154

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Rhodobium marinum 16S rRNA gene, complete sequence	D30791	1390		1080

Genome-based predictions

Literature

References

#3253	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 8319
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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