Name: Thermoanaerobacterium saccharolyticum B6A-RI
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 18052

Type strain:

Species: Thermoanaerobacterium saccharolyticum

Strain Designation: B6A-RI

Culture col. no.: DSM 7060, ATCC 49915

Strain history: <- J. G. Zeikus, Michigan State University, Department of Biochemistry, East Lansing, MI 48824, USA; B6A-RI <- C. Y. Lee

NCBI tax ID(s): 1123370 (strain), 28896 (species)

SI-ID 42752

ATCC 49915, DSM 7060, BCRC 17463, CCRC 17463

Other strains from Thermoanaerobacterium saccharolyticum

T. saccharolyticum JW/SL-YS 485, DSM 8691

Section

Thermoanaerobacterium saccharolyticum B6A-RI is an anaerobe, thermophilic bacterium that was isolated from thermal spring.

anaerobe
thermophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Thermoanaerobacterales*
	Family	*Thermoanaerobacteraceae*
	Genus	*Thermoanaerobacterium*
	Species	**Thermoanaerobacterium saccharolyticum**
	Full Scientific Name (LPSN)	Thermoanaerobacterium saccharolyticum Lee et al. 1993

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2966]

Culture medium

THERMOANAEROBACTER BROCKII MEDIUM (DSMZ Medium 144)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #2966]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #2966]			growth	60 °C

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Temperature range

thermophilic

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #2966]	Sample type/isolated from	thermal spring
[Ref.: #2966]	Geographic location (country and/or sea, region)	Wyoming, Yellowstone Natl. Park
[Ref.: #2966]	Country	USA
[Ref.: #2966]	Country ISO 3 Code	USA
[Ref.: #2966]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Thermal spring
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence L09169 (>99% sequence identity) for Thermoanaerobacterium saccharolyticum from Microbeatlas

Aquatic Samples	23
Soil Samples	7
Animal Samples	275
Plant Samples	4
Total Samples	309

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2966]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #2966]	Thermoanaerobacterium saccharolyticum (DSM 7060) 16S ribosomal RNA (16S rRNA) gene	L09169	1552	ENA	1123370 tax ID

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GC-content

36.0 mol%

Availability in culture collections External links

[Ref.: #2966]

Culture collection no.

DSM 7060, ATCC 49915

[Ref.: #87041]

SI-ID 42752

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Genetics	Stereochemical course and reaction products of the action of beta-xylosidase from Thermoanaerobacterium saccharolyticum strain B6A-RI.	Armand S, Vieille C, Gey C, Heyraud A, Zeikus JG, Henrissat B	Eur J Biochem	10.1111/j.1432-1033.1996.00706.x	1996	*
Enzymology	Crystal structure of beta-D-xylosidase from Thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase.	Yang JK, Yoon HJ, Ahn HJ, Lee BI, Pedelacq JD, Liong EC, Berendzen J, Laivenieks M, Vieille C, Zeikus GJ, Vocadlo DJ, Withers SG, Suh SW	J Mol Biol	10.1016/j.jmb.2003.10.026	2004	*
Enzymology	Purification and cloning of a thermostable xylose (glucose) isomerase with an acidic pH optimum from Thermoanaerobacterium strain JW/SL-YS 489.	Liu SY, Wiegel J, Gherardini FC	J Bacteriol	10.1128/jb.178.20.5938-5945.1996	1996	*
Enzymology	Cloning and sequencing of the Thermoanaerobacterium saccharolyticum B6A-RI apu gene and purification and characterization of the amylopullulanase from Escherichia coli.	Ramesh MV, Podkovyrov SM, Lowe SE, Zeikus JG	Appl Environ Microbiol	10.1128/aem.60.1.94-101.1994	1994	*
Enzymology	Characterization of the active site and thermostability regions of endoxylanase from Thermoanaerobacterium saccharolyticum B6A-RI.	Lee YE, Lowe SE, Henrissat B, Zeikus JG	J Bacteriol	10.1128/jb.175.18.5890-5898.1993	1993	*
Enzymology	Gene cloning, sequencing, and biochemical characterization of endoxylanase from Thermoanaerobacterium saccharolyticum B6A-RI.	Lee YE, Lowe SE, Zeikus JG	Appl Environ Microbiol	10.1128/aem.59.9.3134-3137.1993	1993	*
Enzymology	Genetic organization, sequence and biochemical characterization of recombinant beta-xylosidase from Thermoanaerobacterium saccharolyticum strain B6A-RI.	Lee YE, Zeikus JG	J Gen Microbiol	10.1099/00221287-139-6-1235	1993	*
Enzymology	Cloning, sequencing and biochemical characterization of xylose isomerase from Thermoanaerobacterium saccharolyticum strain B6A-RI.	Lee YE, Ramesh MV, Zeikus JG	J Gen Microbiol	10.1099/00221287-139-6-1227	1993	*
Enzymology	Regulation and Characterization of Xylanolytic Enzymes of Thermoanaerobacterium saccharolyticum B6A-RI.	Lee YE, Lowe SE, Zeikus JG	Appl Environ Microbiol	10.1128/aem.59.3.763-771.1993	1993	*

References

#2966

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 7060

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#87041

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID42752.1 )

* These data were automatically processed and therefore are not curated

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