Workshop and Q&A October 6th

Strain identifier

BacDive ID: 18007

Type strain: Yes

Species: Sedimentibacter hydroxybenzoicus

Strain Designation: JW/Z-1

Culture col. no.: DSM 7310, ATCC 51151

Strain history: <- J. Wiegel, JW/Z-1

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Sedimentibacter hydroxybenzoicus JW/Z-1 is an anaerobe, mesophilic bacterium that was isolated from freshwater pond.

  1. anaerobe
  2. mesophilic
  3. 16S sequence
  4. Bacteria
  5. genome sequence
  • Information on culture and growth conditions Culture and growth conditionsarrow_down
  • [Ref.: #3112] Culture medium
    SEDIMENTIBACTER MEDIUM (DSMZ Medium 643)
    [Ref.: #3112] Culture medium growth Yes
    [Ref.: #3112] Culture medium link Medium recipe at MediaDive MediaDive
    [Ref.: #3112] Culture medium composition expand / minimize
    Temperatures Kind of temperaturearrow to sort Temperaturearrow to sort
    [Ref.: #3112] growth 35  °C
     
    [Ref.: #3112] Temperature range mesophilic
  • Availability in culture collections External linksarrow_down
  • [Ref.: #3112] Culture collection no. DSM 7310, ATCC 51151
    [Ref.: #20218] Associated Passport(s) in StrainInfo 121559, 121557
    Literature:
    Titlearrow to sort Authorsarrow to sort Journalarrow to sort DOIarrow to sort Yeararrow to sort Mesharrow to sort Topicarrow to sort Topic2arrow to sort
    Purification and characterization of an oxygen-sensitive reversible 4-hydroxybenzoate decarboxylase from Clostridium hydroxybenzoicum. He Z, Wiegel J Eur J Biochem 10.1111/j.1432-1033.1995.tb20440.x 1995 Amino Acid Sequence, Carboxy-Lyases/chemistry/*isolation & purification/metabolism, Clostridium/*enzymology, Enzyme Activation, Molecular Sequence Data, Oxygen/metabolism, Sequence Alignment, Substrate Specificity Enzymology Metabolism *
    Clostridium hydroxybenzoicum sp. nov., an amino acid-utilizing, hydroxybenzoate-decarboxylating bacterium isolated from methanogenic freshwater pond sediment. Zhang X, Mandelco L, Wiegel J Int J Syst Bacteriol 10.1099/00207713-44-2-214 1994 Amino Acids/*metabolism, Clostridium/*classification/isolation & purification/*metabolism/ultrastructure, Decarboxylation, Fatty Acids/biosynthesis, Fresh Water, Hydroxybenzoates/*metabolism, Methane/metabolism, Parabens/metabolism, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, RNA, Water Microbiology Phylogeny Metabolism *
    Purification and characterization of an oxygen-sensitive, reversible 3,4-dihydroxybenzoate decarboxylase from Clostridium hydroxybenzoicum. He Z, Wiegel J J Bacteriol 10.1128/jb.178.12.3539-3543.1996 1996 Amino Acid Sequence, Carboxy-Lyases/*isolation & purification/metabolism, Catechols/metabolism, Clostridium/*enzymology, Hydrogen-Ion Concentration, Molecular Sequence Data, Molecular Weight, Oxygen/metabolism, Substrate Specificity, Temperature Enzymology Metabolism *
    Cloning, characterization, and expression of a novel gene encoding a reversible 4-hydroxybenzoate decarboxylase from Clostridium hydroxybenzoicum. Huang J, He Z, Wiegel J J Bacteriol 10.1128/JB.181.16.5119-5122.1999 1999 Base Sequence, Carboxy-Lyases/*genetics/metabolism, Cloning, Molecular, Clostridium/*enzymology/*genetics, Gene Expression Regulation, Bacterial, Gene Expression Regulation, Enzymologic, Molecular Sequence Data, Promoter Regions, Genetic/genetics, Sequence Homology, Amino Acid Enzymology Genetics *
    Reclassification of Clostridium hydroxybenzoicum as Sedimentibacter hydroxybenzoicus gen. nov., comb. nov., and description of Sedimentibacter saalensis sp. nov.. Breitenstein A, Wiegel J, Haertig C, Weiss N, Andreesen JR, Lechner U Int J Syst Evol Microbiol 10.1099/00207713-52-3-801 2002 Bacterial Typing Techniques, Base Composition, Clostridium/*classification/genetics/growth & development/metabolism, Culture Media, DNA, Ribosomal/analysis, Fresh Water/microbiology, Geologic Sediments/*microbiology, Molecular Sequence Data, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA Phylogeny Cultivation *

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