Name: Anaerococcus tetradius DSM 2951
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17969

Type strain:

Species: Anaerococcus tetradius

Culture col. no.: DSM 2951, ATCC 35098, CCM 3634, JCM 1964, GIFU 7672, CCUG 17637, CIP 103927, LMG 14264

Strain history: CIP <- 1993, ATCC <- T. Ezaki: strain GIFU 7672

NCBI tax ID(s): 525255 (strain), 33036 (species)

SI-ID 7938

LMG 14264, ATCC 35098, CCM 3634, DSM 2951, JCM 1964, CIP 103927, CCUG 17637, CCUG 46590, CCUG 46592

Other strains from Anaerococcus tetradius

A. tetradius 01084, DSM 20358
A. tetradius CCUG 44020 A
A. tetradius CCUG 44198
A. tetradius CCUG 44289
A. tetradius CCUG 47145
A. tetradius CCUG 48516
A. tetradius CCUG 60143 B
A. tetradius CCUG 64164

Section

Anaerococcus tetradius DSM 2951 is an anaerobe, mesophilic human pathogen that was isolated from human vagina.

anaerobe
human pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Peptoniphilaceae*
	Genus	*Anaerococcus*
	Species	**Anaerococcus tetradius**
	Full Scientific Name (LPSN)	Anaerococcus tetradius (Ezaki et al. 1983 ex Choukévitch 1911) Ezaki et al. 2001

Synonym

Peptostreptococcus tetradius

Information on morphological and physiological properties Morphology

[Ref.: #123489]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #123489]	Cell shape	coccus-shaped

[Ref.: #123489]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %96.331

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1259]

Culture medium

PYG MEDIUM (MODIFIED) (DSMZ Medium 104)

[Ref.: #1259]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #1259]

Culture medium composition

expand / minimize

[Ref.: #1259]

Culture medium

CHOPPED MEAT MEDIUM (DSMZ Medium 78)

[Ref.: #1259]

Culture medium growth

[Ref.: #1259]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1259]

Culture medium composition

expand / minimize

[Ref.: #40869]

Culture medium

MEDIUM 6 - Columbia agar with 10 % horse blood

[Ref.: #40869]

Culture medium growth

[Ref.: #40869]

Culture medium composition

expand / minimize

[Ref.: #123489]

Culture medium

CIP Medium 20

[Ref.: #123489]

Culture medium growth

[Ref.: #123489]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #123489]

Culture medium

CIP Medium 6

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Culture medium growth

[Ref.: #123489]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #1259]	growth	37 °C
[Ref.: #40869]	growth	37 °C
[Ref.: #67770]	growth	37 °C

[Ref.: #1259]	Temperature range	mesophilic
[Ref.: #40869]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #1259]	Oxygen tolerance	anaerobe
[Ref.: #123489]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %98.846

[Ref.: #69481]	Ability of spore formation	no Confidence in %99
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.996

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68380]	D-mannose ChEBI	+	fermentation	* from API rID32A
[Ref.: #68380]	L-glutamate ChEBI	-	degradation	* from API rID32A
[Ref.: #123489]	nitrate ChEBI	-	reduction
[Ref.: #68380]	nitrate ChEBI	-	reduction	* from API rID32A
[Ref.: #123489]	nitrite ChEBI	-	reduction
[Ref.: #68380]	raffinose ChEBI	-	fermentation	* from API rID32A
[Ref.: #68380]	tryptophan ChEBI	-	energy source	* from API rID32A
[Ref.: #68380]	urea ChEBI	-	hydrolysis	* from API rID32A

	Metabolite production	Metabolite	Production
[Ref.: #123489]		indole ChEBI	no
[Ref.: #68380]		indole ChEBI	no	* from API rID32A

	Physiological tests	Metabolite	Indole test
[Ref.: #68380]		indole ChEBI	-	* from API rID32A

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68380]	alanine arylamidase	-	3.4.11.2	* from API rID32A
[Ref.: #68380]	alkaline phosphatase	-	3.1.3.1	* from API rID32A, API zym
[Ref.: #68380]	alpha-arabinosidase	-	3.2.1.55	* from API rID32A
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68380]	alpha-fucosidase	-	3.2.1.51	* from API rID32A, API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68380]	alpha-glucosidase	+	3.2.1.20	* from API rID32A, API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68380]	beta-galactosidase	-	3.2.1.23	* from API rID32A, API zym
[Ref.: #68380]	beta-Galactosidase 6-phosphate	-		* from API rID32A
[Ref.: #68380]	beta-glucosidase	-	3.2.1.21	* from API rID32A, API zym
[Ref.: #68380]	beta-glucuronidase	+	3.2.1.31	* from API rID32A, API zym
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68380]	glutamate decarboxylase	-	4.1.1.15	* from API rID32A
[Ref.: #68380]	glutamyl-glutamate arylamidase	-		* from API rID32A
[Ref.: #68380]	glycin arylamidase	-		* from API rID32A
[Ref.: #68380]	leucine arylamidase	-	3.4.11.1	* from API rID32A, API zym
[Ref.: #68380]	leucyl glycin arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68380]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32A, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68380]	phenylalanine arylamidase	-		* from API rID32A
[Ref.: #68380]	proline-arylamidase	-	3.4.11.5	* from API rID32A
[Ref.: #68380]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32A
[Ref.: #68380]	serine arylamidase	-		* from API rID32A
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68380]	tryptophan deaminase	-	4.1.99.1	* from API rID32A
[Ref.: #123489]	urease	+	3.5.1.5
[Ref.: #68380]	urease	-	3.5.1.5	* from API rID32A
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® rID32A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	alpha-Galactosidasealpha GAL	beta-Galactosidasebeta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha-Glucosidasealpha GLU	beta-Glucosidasebeta GLU	alpha-Arabinosidasealpha ARA	beta-Glucuronidasebeta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	Fermentation of D-mannoseMNE	Fermentation of raffinoseRAF	Glutamate decarboxylaseGDC	alpha-Fucosidasealpha FUC	Reduction of nitrateNIT	Indole productionIND	Alkaline phosphatasePAL	L-arginine arylamidaseArgA	Proline arylamidaseProA	Leucyl glycin arylamidaseLGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	Pyrrolidonyl arylamidasePyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
[Ref.: #1259]	12533	-	+/-	not determinedn.d.	-	-	+	-	-	+	-	+	-	-	-	-	-	-	+/-	-	-	-	-	-	+/-	-	-	+/-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #123489]	7742	-	-	+	+	-	-	-	-	-	-	+	+	-	-	+	+	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1259]	Sample type/isolated from	human vagina

[Ref.: #67770]	Sample type/isolated from	Vaginal discharge

[Ref.: #123489]	Sample type/isolated from	Human, Vagina
[Ref.: #123489]	Isolation date	1979
* marker position based on {}

Isolation sources categories

#Host Body-Site	#Urogenital tract	#Vagina
#Host	#Human	#Female

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LC036320 (>99% sequence identity) for Anaerococcus tetradius subclade from Microbeatlas

Aquatic Samples	44
Soil Samples	86
Animal Samples	8492
Plant Samples	14
Total Samples	8636

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1259]	Pathogenicity (human)	yes, in single cases
[Ref.: #1259]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #123489]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #1259]	Anaerococcus tetradius gene for 16S ribosomal RNA, partial sequence, isolate: GIFU 7672	D14142	1377	ENA	33036 tax ID
[Ref.: #67770]	Anaerococcus tetradius gene for 16S ribosomal RNA, partial sequence, strain: JCM 1964	LC036320	1487	ENA	33036 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Anaerococcus tetradius ATCC 35098	GCA_000159095	scaffold	GenBank	525255 tax ID
[Ref.: #66792]	Anaerococcus tetradius ATCC 35098	525255.3	wgs	PATRIC	525255 tax ID	*
[Ref.: #66792]	Anaerococcus tetradius ATCC 35098	643886055	draft	JGI IMG/M	525255 tax ID	*

[Ref.: #1259]	GC-content	30.0 mol%
[Ref.: #67770]	GC-content	30 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Anaerococcus tetradius ATCC 35098 ATCC 35098 NCBI: GCA_000159095.1
[Ref.: #69481]	spore-forming	no	99	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Anaerococcus tetradius ATCC 35098 PATRIC: 525255.3
[Ref.: #69480]	gram-positive	yes	95.845	no
[Ref.: #69480]	anaerobic	yes	99.443	yes
[Ref.: #69480]	halophile	no	59.13	no
[Ref.: #69480]	spore-forming	no	92.885	no
[Ref.: #69480]	glucose-util	yes	88.117	no
[Ref.: #69480]	aerobic	no	98.13	no
[Ref.: #69480]	motile	no	94.548	no
[Ref.: #69480]	flagellated	no	96.541	no
[Ref.: #69480]	thermophile	no	97.927	no
[Ref.: #69480]	glucose-ferment	yes	77.758	no

Availability in culture collections External links

[Ref.: #1259]

Culture collection no.

DSM 2951, ATCC 35098, CCM 3634, JCM 1964, GIFU 7672, CCUG 17637, CIP 103927, LMG 14264

[Ref.: #86956]

SI-ID 7938

Literature:

	Title	Authors	Journal	DOI	Year
	Further Identification of Novel Lantibiotic Operons Using LanM-Based Genome Mining.	O'Sullivan O, Begley M, Ross RP, Cotter PD, Hill C	Probiotics Antimicrob Proteins	10.1007/s12602-011-9062-y	2011	*

References

#1259

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2951

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#40869 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68380

Automatically annotated from API rID32A .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#86956

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID7938.1 )

#123489 Collection of Institut Pasteur ; Curators of the CIP; CIP 103927
* These data were automatically processed and therefore are not curated

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Anaerococcus tetradius ATCC 35098 ATCC 35098

Anaerococcus tetradius ATCC 35098

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