Name: Mangroviflexus xiamenensis P2
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17815

Type strain:

Species: Mangroviflexus xiamenensis

Strain Designation: P2

Culture col. no.: DSM 24214, CGMCC 1.5167

Strain history: <- X. Xu, Third Inst. Oceanography, State Oceanic Administration, Xiamen, China; P2 <- Z. Gao

NCBI tax ID(s): 995053 (species)

SI-ID 403281

DSM 24214

Section

Mangroviflexus xiamenensis P2 is an anaerobe, mesophilic, Gram-negative bacterium that was isolated from anoxic organic-rich offshore mangrove sediment.

Gram-negative
motile
rod-shaped
anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Bacteroidia*
	Order	*Bacteroidales*
	Family	*Marinilabiliaceae*
	Genus	*Mangroviflexus*
	Species	**Mangroviflexus xiamenensis**
	Full Scientific Name (LPSN)	Mangroviflexus xiamenensis Zhao et al. 2012

Information on morphological and physiological properties Morphology

[Ref.: #30439]	Gram stain	negative

[Ref.: #30439]	Cell length	6.25 µm

[Ref.: #30439]	Cell width	0.25 µm

[Ref.: #30439]	Cell shape	rod-shaped

[Ref.: #30439]	Motility	yes

[Ref.: #17557]

Incubation period

2-3 days

[Ref.: #30439]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17557]

Culture medium

YTBC - MEDIUM (DSMZ Medium 1353)

[Ref.: #17557]

Culture medium growth

[Ref.: #17557]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17557]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #17557]	growth	37 °C
[Ref.: #30439]	growth	22-39 °C
[Ref.: #30439]	optimum	35 °C

[Ref.: #17557]	Temperature range	mesophilic
[Ref.: #30439]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30439]			optimum	7.25
[Ref.: #30439]			growth	5-8.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #17557]	Oxygen tolerance	anaerobe
[Ref.: #30439]	Oxygen tolerance	anaerobe

[Ref.: #30439]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30439]		NaCl		growth	0.2-3.5	%
[Ref.: #30439]		NaCl		optimum	0.75	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30439]	arabinose ChEBI	+	carbon source
[Ref.: #30439]	cellobiose ChEBI	+	carbon source
[Ref.: #30439]	glucose ChEBI	+	carbon source
[Ref.: #30439]	maltose ChEBI	+	carbon source
[Ref.: #30439]	mannose ChEBI	+	carbon source
[Ref.: #30439]	xylose ChEBI	+	carbon source

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17557]	Sample type/isolated from	anoxic organic-rich offshore mangrove sediment
[Ref.: #17557]	Geographic location (country and/or sea, region)	Hainan Island, Dongzhai Port
[Ref.: #17557]	Country	China
[Ref.: #17557]	Country ISO 3 Code	CHN
[Ref.: #17557]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Mangrove
#Environmental	#Aquatic	#Sediment
#Condition	#Anoxic (anaerobic)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HQ697914 (>99% sequence identity) for Mangroviflexus xiamenensis subclade from Microbeatlas

Aquatic Samples	177
Soil Samples	30
Animal Samples	25
Plant Samples	10
Total Samples	242

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17557]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17557]	Mangroviflexus xiamenensis strain P2 16S ribosomal RNA gene, partial sequence	HQ697914	1440	ENA	995053 tax ID

[Ref.: #17557]	GC-content	44.2 mol%	high performance liquid chromatography (HPLC)
[Ref.: #30439]	GC-content	44.2 mol%

Availability in culture collections External links

[Ref.: #17557]

Culture collection no.

DSM 24214, CGMCC 1.5167

[Ref.: #86806]

SI-ID 403281

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mangroviflexus xiamenensis gen. nov., sp. nov., a member of the family Marinilabiliaceae isolated from mangrove sediment.	Zhao C, Gao Z, Qin Q, Ruan L	Int J Syst Evol Microbiol	10.1099/ijs.0.036137-0	2011	*

References

#17557

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24214

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30439

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26775 (see below)

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#86806

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID403281.1 )

#26775

IJSEM 1819 2012 ( DOI 10.1099/ijs.0.036137-0 , PubMed 21984671 )

* These data were automatically processed and therefore are not curated

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