Name: Anaerophaga thermohalophila Fru22
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17810

Type strain:

Species: Anaerophaga thermohalophila

Strain Designation: Fru22

Culture col. no.: DSM 12881, OCM 798

Strain history: <- K. Denger, Universität Konstanz, Fakultät für Biologie, Konstanz, Germany; Fru22 <- K. Denger {1994}

NCBI tax ID(s): 886379 (strain), 177400 (species)

SI-ID 100503

DSM 12881

Section

Anaerophaga thermohalophila Fru22 is an anaerobe, thermophilic, Gram-negative bacterium that was isolated from anoxic sludge from a refinery.

Gram-negative
anaerobe
thermophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Bacteroidia*
	Order	*Bacteroidales*
	Family	*Marinilabiliaceae*
	Genus	*Anaerophaga*
	Species	**Anaerophaga thermohalophila**
	Full Scientific Name (LPSN)	Anaerophaga thermohalophila Denger et al. 2002

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.988

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4851]

Culture medium

ANAEROBIC SEAWATER (SWM) MEDIUM (DSMZ Medium 504)

[Ref.: #4851]

Culture medium growth

[Ref.: #4851]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4851]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #4851]			growth	50 °C

[Ref.: #4851]

Temperature range

thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #4851]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %97.961

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.897

[Ref.: #4851]

Name of produced compound

surface-active compound (tenside)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4851]	Sample type/isolated from	anoxic sludge from a refinery
[Ref.: #4851]	Geographic location (country and/or sea, region)	Hannover
[Ref.: #4851]	Country	Germany
[Ref.: #4851]	Country ISO 3 Code	DEU
[Ref.: #4851]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered	#Industrial	-
#Environmental	#Terrestrial	#Mud (Sludge)
#Condition	#Anoxic (anaerobic)	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #4851]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #4851]	Anaerophaga thermohalophila partial 16S rRNA gene, strain Fru22	AJ418048	1524	ENA	886379 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Anaerophaga thermohalophila DSM 12881	GCA_000191885	contig	GenBank	886379 tax ID	*
[Ref.: #66792]	Anaerophaga thermohalophila DSM 12881	886379.4	wgs	PATRIC	886379 tax ID	*
[Ref.: #66792]	Anaerophaga thermohalophila Fru22, DSM 12881	2515154051	draft	JGI IMG/M	886379 tax ID	*

[Ref.: #4851]

GC-content

41.8 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Anaerophaga thermohalophila DSM 12881 PATRIC: 886379.4
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Anaerophaga thermohalophila DSM 12881 PATRIC: 886379.4
[Ref.: #69480]	motile	no	79.968	no
[Ref.: #69480]	flagellated	no	97.136	no
[Ref.: #69480]	gram-positive	no	97.638	no
[Ref.: #69480]	anaerobic	yes	96.255	yes
[Ref.: #69480]	halophile	no	66.29	no
[Ref.: #69480]	spore-forming	no	94.626	no
[Ref.: #69480]	thermophile	no	60.879	yes
[Ref.: #69480]	glucose-util	yes	86.105	no
[Ref.: #69480]	aerobic	no	94.676	yes
[Ref.: #69480]	glucose-ferment	no	50.523	no

Availability in culture collections External links

[Ref.: #4851]

Culture collection no.

DSM 12881, OCM 798

[Ref.: #86802]

SI-ID 100503

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thermophagus xiamenensis gen. nov., sp. nov., a moderately thermophilic and strictly anaerobic bacterium isolated from hot spring sediment.	Gao ZM, Liu X, Zhang XY, Ruan LW	Int J Syst Evol Microbiol	10.1099/ijs.0.038547-0	2012	*
Phylogeny	Alkalitalea saponilacus gen. nov., sp. nov., an obligately anaerobic, alkaliphilic, xylanolytic bacterium from a meromictic soda lake.	Zhao B, Chen S	Int J Syst Evol Microbiol	10.1099/ijs.0.038315-0	2011	*
Phylogeny	Geofilum rubicundum gen. nov., sp. nov., isolated from deep subseafloor sediment.	Miyazaki M, Koide O, Kobayashi T, Mori K, Shimamura S, Nunoura T, Imachi H, Inagaki F, Nagahama T, Nogi Y, Deguchi S, Takai K	Int J Syst Evol Microbiol	10.1099/ijs.0.032326-0	2011	*
Phylogeny	Anaerophaga thermohalophila gen. nov., sp. nov., a moderately thermohalophilic, strictly anaerobic fermentative bacterium.	Denger K, Warthmann R, Ludwig W, Schink B	Int J Syst Evol Microbiol	10.1099/00207713-52-1-173	2002	*

References

#4851

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 12881

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#86802

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID100503.1 )

* These data were automatically processed and therefore are not curated

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Anaerophaga thermohalophila DSM 12881

Anaerophaga thermohalophila DSM 12881

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