Actinomyces urogenitalis (DSM 15434, CCUG 38702, CIP 106421)

Name: Actinomyces urogenitalis (DSM 15434, CCUG 38702, CIP 106421)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 178

Type strain

Culture col. no. DSM 15434 CCUG 38702 CIP 106421

NCBI tax ID(s) 525246 103621

Special Collections DSMZ CCUG CIP Literature strains

History <- CCUG <- PHL, Göteborg CIP <- 2000, CCUG <- 1997, Gen. Diagn., PHL, Göteborg, Sweden

Links

Actinomyces urogenitalis DSM 15434 is a microaerophile, Gram-positive, rod-shaped bacterium that was isolated from human vaginal secretion.

Gram-positive rod-shaped microaerophile genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 51192

NCTC 14285,CCUG 38702,CIP 106421,DSM 15434,KCTC 5117

@ref 20215

Last LPSN update 2026-02-09 11:17:49

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Actinomycetales

Family Actinomycetaceae

Genus Actinomyces

Species Actinomyces urogenitalis

Full scientific name Actinomyces urogenitalis Nikolaitchouk et al. 2000

BacDive ID	Other strains from **Actinomyces urogenitalis** (10)	Type strain
135407	A. urogenitalis CIP 100478
136099	A. urogenitalis CIP 102474
137236	A. urogenitalis 723-82, CIP 103188
137749	A. urogenitalis 820.83, CIP 100493
145523	A. urogenitalis CCUG 28744
150711	A. urogenitalis CCUG 42029
151396	A. urogenitalis CCUG 44038
151531	A. urogenitalis CCUG 44229
152932	A. urogenitalis CCUG 48051
156620	A. urogenitalis CCUG 63604

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
23113	positive	rod-shaped
123755	positive	rod-shaped
125438			92.875
125438	positive		92.163
125439	positive		99.1

Colony morphology

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
5819	BHI/2 MEDIUM (DSMZ Medium 217)	Medium recipe at MediaDive	Name: BHI/2 MEDIUM (DSMZ Medium 217) Composition: Brain heart infusion 37.0 g/l Casein hydrolysate 10.0 g/l Glucose 5.0 g/l Yeast extract 5.0 g/l Distilled water
5819	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
36438	MEDIUM 6 - Columbia agar with 10 % horse blood		Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
123755	CIP Medium 6	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
5819	positive	growth	37
36438	positive	growth	37
54404	positive	growth	37
123755	positive	growth	25-41
123755	negative	growth	10
123755	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
5819	microaerophile
23113	facultative anaerobe
54404	microaerophile
123755	facultative anaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
123755	NaCl	positive	growth	2-4 %
123755	NaCl		growth	6 %
123755	NaCl		growth	8 %
123755	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
23113	15688 ChEBI	acetoin	+/-	other
68380	29016 ChEBI	arginine	-	hydrolysis	from API rID32A
123755	16947 ChEBI	citrate	-	carbon source
23113	23456 ChEBI	cyclodextrin	-	builds acid from
23113	18333 ChEBI	D-arabitol	+	builds acid from
23113	18333 ChEBI	D-arabitol	+	fermentation
23113	17634 ChEBI	D-glucose	+	builds acid from
68379	17634 ChEBI	D-glucose	+	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68380	16024 ChEBI	D-mannose	+	fermentation	from API rID32A
68379	16988 ChEBI	D-ribose	+	fermentation	from API Coryne
23113	65327 ChEBI	D-xylose	+	builds acid from
23113	65327 ChEBI	D-xylose	+	fermentation
68379	65327 ChEBI	D-xylose	+	fermentation	from API Coryne
23113	4853 ChEBI	esculin	+	hydrolysis
68379	4853 ChEBI	esculin	+	hydrolysis	from API Coryne
123755	4853 ChEBI	esculin	+	hydrolysis
23113	5291 ChEBI	gelatin	-	hydrolysis
68379	5291 ChEBI	gelatin	-	hydrolysis	from API Coryne
23113	28087 ChEBI	glycogen	-	builds acid from
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
23113	606565 ChEBI	hippurate	-	hydrolysis
123755	606565 ChEBI	hippurate	-	hydrolysis
23113	30849 ChEBI	L-arabinose	+/-	builds acid from
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
23113	17716 ChEBI	lactose	+	builds acid from
68379	17716 ChEBI	lactose	+	fermentation	from API Coryne
23113	17306 ChEBI	maltose	+	builds acid from
68379	17306 ChEBI	maltose	+	fermentation	from API Coryne
23113	29864 ChEBI	mannitol	+/-	builds acid from
23113	6731 ChEBI	melezitose	+	builds acid from
23113	6731 ChEBI	melezitose	+	fermentation
23113	320055 ChEBI	methyl beta-D-glucopyranoside	+/-	builds acid from
23113	17632 ChEBI	nitrate	+	reduction
68379	17632 ChEBI	nitrate	+	reduction	from API Coryne
68380	17632 ChEBI	nitrate	+	reduction	from API rID32A
123755	17632 ChEBI	nitrate	+	reduction
123755	17632 ChEBI	nitrate	+	respiration
123755	16301 ChEBI	nitrite	-	reduction
23113	16634 ChEBI	raffinose	+	builds acid from
68380	16634 ChEBI	raffinose	+	fermentation	from API rID32A
23113	33942 ChEBI	ribose	+/-	builds acid from
23113	30911 ChEBI	sorbitol	-	builds acid from
23113	17992 ChEBI	sucrose	+	builds acid from
68379	17992 ChEBI	sucrose	+	fermentation	from API Coryne
23113	33954 ChEBI	tagatose	-	builds acid from
23113	27082 ChEBI	trehalose	+	builds acid from
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
123755	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68380	35581 ChEBI	indole		from API rID32A
123755	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test	Voges-proskauer-test	Methylred-test
123755	15688 ChEBI	acetoin		-
123755	17234 ChEBI	glucose			+
68380	35581 ChEBI	indole	-			from API rID32A

Enzymes

@ref	Value	Activity	Ec
23113	acid phosphatase	-	3.1.3.2
68382	acid phosphatase	-	3.1.3.2	from API zym
68380	alanine arylamidase	+	3.4.11.2	from API rID32A
123755	alcohol dehydrogenase	-	1.1.1.1
23113	alkaline phosphatase	+/-	3.1.3.1
68379	alkaline phosphatase	-	3.1.3.1	from API Coryne
68380	alkaline phosphatase	-	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	+	3.2.1.55	from API rID32A
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
23113	alpha-fucosidase	-	3.2.1.51
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
23113	alpha-galactosidase	+/-	3.2.1.22
23113	alpha-galactosidase	+	3.2.1.22
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68380	alpha-galactosidase	+	3.2.1.22	from API rID32A
23113	alpha-glucosidase	+	3.2.1.20
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68380	alpha-glucosidase	+	3.2.1.20	from API rID32A
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
23113	alpha-mannosidase	+/-	3.2.1.24
123755	amylase	+
23113	arginine dihydrolase	-	3.5.3.6
68380	arginine dihydrolase	-	3.5.3.6	from API rID32A
68382	beta-galactosidase	+	3.2.1.23	from API zym
123755	beta-galactosidase	-	3.2.1.23
68379	beta-galactosidase	+	3.2.1.23	from API Coryne
68380	beta-galactosidase	+	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
23113	beta-glucosidase	+	3.2.1.21
68382	beta-glucosidase	+	3.2.1.21	from API zym
68380	beta-glucosidase	+	3.2.1.21	from API rID32A
68379	beta-glucosidase	+	3.2.1.21	from API Coryne
23113	beta-glucuronidase	-	3.2.1.31
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
123755	caseinase	-	3.4.21.50
23113	catalase	-	1.11.1.6
123755	catalase	-	1.11.1.6
68379	catalase	-	1.11.1.6	from API Coryne
23113	chymotrypsin	-	3.4.4.5
23113	cystine arylamidase	+/-	3.4.11.3
123755	DNase	-
23113	esterase (C 4)	-
23113	esterase lipase (C 8)	-
123755	gamma-glutamyltransferase	-	2.3.2.2
123755	gelatinase	-
68379	gelatinase	-		from API Coryne
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	histidine arylamidase	-		from API rID32A
68380	L-arginine arylamidase	+		from API rID32A
123755	lecithinase	-
23113	leucine arylamidase	+	3.4.11.1
68382	leucine arylamidase	+	3.4.11.1	from API zym
68380	leucine arylamidase	+	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	+	3.4.11.1	from API rID32A
123755	lipase	-
23113	lipase (C 14)	-
68382	lipase (C 14)	-		from API zym
123755	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68380	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API rID32A
68379	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
123755	ornithine decarboxylase	-	4.1.1.17
123755	oxidase	-
123755	phenylalanine ammonia-lyase	-	4.3.1.24
68380	phenylalanine arylamidase	+		from API rID32A
68380	proline-arylamidase	+	3.4.11.5	from API rID32A
123755	protease	-
23113	pyrazinamidase	-	3.5.1.B15
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
23113	pyroglutamic acid arylamidase	+
23113	pyrrolidonyl arylamidase	+	3.4.19.3
68379	pyrrolidonyl arylamidase	+	3.4.19.3	from API Coryne
68380	serine arylamidase	+		from API rID32A
23113	trypsin	-	3.4.21.4
68382	trypsin	-	3.4.21.4	from API zym
123755	tryptophan deaminase	-
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
123755	tween esterase	-
68380	tyrosine arylamidase	+		from API rID32A
23113	urease	-	3.5.1.5
123755	urease	-	3.5.1.5
68380	urease	-	3.5.1.5	from API rID32A
68379	urease	-	3.5.1.5	from API Coryne
23113	valine arylamidase	+
68382	valine arylamidase	+		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	formaldehyde oxidation	100	3 of 3
66794	denitrification	100	2 of 2
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	coenzyme A metabolism	100	4 of 4
66794	acetoin degradation	100	3 of 3
66794	ceramide biosynthesis	100	1 of 1
66794	acetate fermentation	100	4 of 4
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	palmitate biosynthesis	100	22 of 22
66794	Entner Doudoroff pathway	90	9 of 10
66794	chorismate metabolism	88.89	8 of 9
66794	peptidoglycan biosynthesis	86.67	13 of 15
66794	photosynthesis	85.71	12 of 14
66794	glycolate and glyoxylate degradation	83.33	5 of 6
66794	starch degradation	80	8 of 10
66794	vitamin K metabolism	80	4 of 5
66794	threonine metabolism	80	8 of 10
66794	metabolism of amino sugars and derivatives	80	4 of 5
66794	pyrimidine metabolism	80	36 of 45
66794	myo-inositol biosynthesis	80	8 of 10
66794	d-mannose degradation	77.78	7 of 9
66794	valine metabolism	77.78	7 of 9
66794	purine metabolism	77.66	73 of 94
66794	sulfopterin metabolism	75	3 of 4
66794	glycogen biosynthesis	75	3 of 4
66794	gluconeogenesis	75	6 of 8
66794	C4 and CAM-carbon fixation	75	6 of 8
66794	pentose phosphate pathway	72.73	8 of 11
66794	proline metabolism	72.73	8 of 11
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	reductive acetyl coenzyme A pathway	71.43	5 of 7
66794	glycolysis	70.59	12 of 17
66794	phenylalanine metabolism	69.23	9 of 13
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	cyanate degradation	66.67	2 of 3
66794	enterobactin biosynthesis	66.67	2 of 3
66794	aspartate and asparagine metabolism	66.67	6 of 9
66794	molybdenum cofactor biosynthesis	66.67	6 of 9
66794	heme metabolism	64.29	9 of 14
66794	d-xylose degradation	63.64	7 of 11
66794	ketogluconate metabolism	62.5	5 of 8
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	degradation of sugar alcohols	62.5	10 of 16
66794	isoleucine metabolism	62.5	5 of 8
66794	vitamin B1 metabolism	61.54	8 of 13
66794	NAD metabolism	61.11	11 of 18
66794	glycogen metabolism	60	3 of 5
66794	isoprenoid biosynthesis	57.69	15 of 26
66794	citric acid cycle	57.14	8 of 14
66794	propanol degradation	57.14	4 of 7
66794	tetrahydrofolate metabolism	57.14	8 of 14
66794	serine metabolism	55.56	5 of 9
66794	degradation of hexoses	55.56	10 of 18
66794	vitamin B6 metabolism	54.55	6 of 11
66794	metabolism of disaccharids	54.55	6 of 11
66794	leucine metabolism	53.85	7 of 13
66794	histidine metabolism	51.72	15 of 29
66794	oxidative phosphorylation	51.65	47 of 91
66794	mannosylglycerate biosynthesis	50	1 of 2
66794	ethanol fermentation	50	1 of 2
66794	lactate fermentation	50	2 of 4
66794	suberin monomers biosynthesis	50	1 of 2
66794	methionine metabolism	50	13 of 26
66794	adipate degradation	50	1 of 2
66794	phenylmercury acetate degradation	50	1 of 2
66794	degradation of pentoses	50	14 of 28
66794	butanoate fermentation	50	2 of 4
66794	quinate degradation	50	1 of 2
66794	arginine metabolism	50	12 of 24
66794	selenocysteine biosynthesis	50	3 of 6
66794	lysine metabolism	45.24	19 of 42
66794	alanine metabolism	44.83	13 of 29
66794	non-pathway related	44.74	17 of 38
66794	CO2 fixation in Crenarchaeota	44.44	4 of 9
66794	cysteine metabolism	44.44	8 of 18
66794	lipid A biosynthesis	44.44	4 of 9
66794	ubiquinone biosynthesis	42.86	3 of 7
66794	glutamate and glutamine metabolism	42.86	12 of 28
66794	glutathione metabolism	42.86	6 of 14
66794	tryptophan metabolism	42.11	16 of 38
66794	lipid metabolism	41.94	13 of 31
66794	glycine metabolism	40	4 of 10
66794	arachidonate biosynthesis	40	2 of 5
66794	methylglyoxal degradation	40	2 of 5
66794	lipoate biosynthesis	40	2 of 5
66794	propionate fermentation	40	4 of 10
66794	cellulose degradation	40	2 of 5
66794	coenzyme M biosynthesis	40	4 of 10
66794	urea cycle	38.46	5 of 13
66794	phenylpropanoid biosynthesis	38.46	5 of 13
66794	ascorbate metabolism	36.36	8 of 22
66794	tyrosine metabolism	35.71	5 of 14
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	degradation of aromatic, nitrogen containing compounds	33.33	4 of 12
66794	flavin biosynthesis	33.33	5 of 15
66794	octane oxidation	33.33	1 of 3
66794	sulfoquinovose degradation	33.33	1 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	nitrate assimilation	33.33	3 of 9
66794	pantothenate biosynthesis	33.33	2 of 6
66794	IAA biosynthesis	33.33	1 of 3
66794	mevalonate metabolism	28.57	2 of 7
66794	degradation of sugar acids	28	7 of 25
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	ppGpp biosynthesis	25	1 of 4
66794	CMP-KDO biosynthesis	25	1 of 4
66794	androgen and estrogen metabolism	25	4 of 16
66794	cyclohexanol degradation	25	1 of 4
66794	dTDPLrhamnose biosynthesis	25	2 of 8
66794	biotin biosynthesis	25	1 of 4
66794	allantoin degradation	22.22	2 of 9
66794	4-hydroxymandelate degradation	22.22	2 of 9

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
54404	+	-	+	-	-	+	+	+	+	-	-	-	+	+	+	-	+	+	+	-	-

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
54404	-	-	-	-	-	+	+	-	-	-	-	-	+	+	-	+	+	+	+	-
123755	-	+	+	+	-	+	+	+	-	-	-	-	+	+	-	+	+	+	-	-

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
5819	-	-	+	+	-	+	+	+	-	+	+	+	-	-	+	-	-	+	+	+	+	+	+/-	+	+	+/-	-	-	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
123755	not determinedn.d.	+	-	-	+	-	-	+	-	+	+	+	+	+	-	-	+	+	-	+	-	-	-	+	-	-	-	-	-	-	-	-	+	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body Product	#Fluids	-
#Host	#Human	#Female
#Host Body-Site	#Urogenital tract	#Vagina
#Host Body Product	#Urogenital tract	#Vaginal secretion

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
5819	human vaginal secretion		Göteborg	Sweden	SWE	Europe
23113	vaginal secretion of 33 year old woman
54404	Human vaginal secretion,33-yr-old subject	1997-11-07	Göteborg	Sweden	SWE	Europe
123755	Human, Vaginal secretion		Göteborg	Sweden	SWE	Europe	1997

Taxonmaps

69479

Global distribution of 16S sequence AJ243791 (>99% sequence identity) for Actinomyces urogenitalis subclade from Microbeatlas

Aquatic Samples	132
Soil Samples	88
Animal Samples	10078
Plant Samples	35
Total Samples	10333

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Biosafety level	Biosafety level comment
5819	yes, in single cases	1	Risk group (German classification) According to TRBA 466
123755		2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM15903v1 assembly for Actinomyces urogenitalis DSM 15434	scaffold	GCA_000159035	525246.3	643886015	525246	33.19

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
5819	Actinomyces urogenitalis 16S rRNA gene	AJ243791	1423		103621

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Actinomyces urogenitalis DSM 15434
NCBI: GCA_000159035

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	50.50	no
125439	motility	BacteriaNetⓘ	no	83.60	no
125439	gram_stain	BacteriaNetⓘ	positive	99.10	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	85.20	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Actinomyces urogenitalis DSM 15434 DSM 15434
NCBI: GCA_000159035.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	92.16	no
125438	anaerobic	anaerobicⓘ	no	78.53	yes
125438	aerobic	aerobicⓘ	no	80.50	no
125438	spore-forming	spore-formingⓘ	no	85.60	no
125438	thermophilic	thermophileⓘ	no	95.32	yes
125438	flagellated	motile2+ⓘ	no	92.88	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Sevoflurane-induced gut microbiota dysbiosis drives adolescent neurobehavioral deficits in neonatal rats: Protective role of eicosapentaenoic acid.	Fan P, Wang K, Wei H, Yang L, Zhang S, Cheng Y, Li C, Zhang Y, Jia P, Zhang Y, Xun Y, Wang Y, Yang P, Zhang P, Wang N.	iScience	10.1016/j.isci.2025.113657	2025
Pathogenicity	[Our experiences with Actinomyces urogenitalis in human clinical samples].	Jezek P, Safrankova R, Malisova L.	Klin Mikrobiol Infekc Lek		2020
	Investigation of Bladder Microbiota in Female Patients with Overactive Bladder Syndrome.	Kaya E, Sahinkanat T, Aral M.	Urol Res Pract	10.5152/tud.2025.24040	2025
	Bacteremia and urogenital infection with Actinomyces urogenitalis following prolonged urinary retention.	Holmgaard DB, Marina D, Hansen F, Christensen JJ.	APMIS	10.1111/apm.13000	2020
	Antibacterial Activity of Fusidic Acid-Loaded Electrospun Polylactide Fiber Fleeces Against Periodontopathogenic Species.	Sigusch BW, Reise M, Kranz S, Beck J, Wagner K, Guellmar A, Heyder M.	Pharmaceutics	10.3390/pharmaceutics17070821	2025
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	Microbiome composition and presence of cultivable commensal groups of Southern Tamanduas (Tamandua tetradactyla) varies with captive conditions.	Amin A, Mekadim C, Modrackova N, Bolechova P, Mrazek J, Neuzil-Bunesova V.	Anim Microbiome	10.1186/s42523-024-00311-w	2024
	Expect the unexpected: chronic renal abscess secondary to renal actinomycosis.	Walsh J, Fennelly N, Kilgallen C, Connor EO, Forde J, Dinesh B, Fitzpatrick F.	J Surg Case Rep	10.1093/jscr/rjab536	2021
	Antimicrobial Sol-Gel Glassy Surfaces for Modification of Dental Implant Abutments to Reduce Microbial Adhesion.	Colgecen O, Akarsu M, Akarsu E, Uzel A, Ozdal Kurt F, Topal ES, Gencer GM, Keski A, Yavuz E.	Gels	10.3390/gels11110882	2025
	Development of a Prevotella bivia PNA probe and a multiplex approach to detect three relevant species in bacterial vaginosis-associated biofilms.	Sousa LGV, Almeida C, Muzny CA, Cerca N.	NPJ Biofilms Microbiomes	10.1038/s41522-023-00411-6	2023
Pathogenicity	Antimicrobial susceptibility of clinical isolates of Actinomyces and related genera reveals an unusual clindamycin resistance among Actinomyces urogenitalis strains.	Barberis C, Budia M, Palombarani S, Rodriguez CH, Ramirez MS, Arias B, Bonofiglio L, Famiglietti A, Mollerach M, Almuzara M, Vay C.	J Glob Antimicrob Resist	10.1016/j.jgar.2016.11.007	2017
	Armenian Hamsters (Nothocricetulus migratorius): A New Host Susceptible to Corynebacterium bovis Infection and Disease.	Cheleuitte-Nieves C, Miranda IC, Michelson A, Walton K, Geist GE, Nickerson K, Wipf JR, Carrasco SE, Monette S, Mammone R, Lipman NS.	J Am Assoc Lab Anim Sci	10.30802/aalas-jaalas-25-054	2025
Phylogeny	Siamese Networks for Clinically Relevant Bacteria Classification Based on Raman Spectroscopy.	Contreras J, Mostafapour S, Popp J, Bocklitz T.	Molecules	10.3390/molecules29051061	2024
	Lighting the Path: Raman Spectroscopy's Journey Through the Microbial Maze.	Salbreiter M, Frempong SB, Even S, Wagenhaus A, Girnus S, Rosch P, Popp J.	Molecules	10.3390/molecules29245956	2024
	Astaxanthin synthesis by Xanthophyllomyces dendrorhous DSM 5626 and its astaxanthin overproducing mutants on xylose media under different illumination.	Stachowiak B.	Acta Sci Pol Technol Aliment	10.17306/j.afs.2014.3.6	2014
	A New PNA-FISH Probe Targeting Fannyhessea vaginae.	Sousa LGV, Castro J, Franca A, Almeida C, Muzny CA, Cerca N.	Front Cell Infect Microbiol	10.3389/fcimb.2021.779376	2021
	Antibacterial and Antifungal Activity of the Human Endometrial Fluid during the Natural Cycle.	Bregon-Villahoz M, Moragues MD, Arrieta-Aguirre I, Azkargorta M, Lainz L, Diez-Zapirain M, Iglesias M, Prieto MB, Matorras A, Exposito A, Elortza F, Matorras R.	Infect Dis Obstet Gynecol	10.1155/2021/8849664	2021
Pathogenicity	Efficiency of selected mutagens in generating Xanthophyllomyces dendrorhous strains hyperproducing astaxanthin.	Stachowiak B.	Pol J Microbiol	10.33073/pjm-2013-008	2013
Enzymology	Actinomyces urogenitalis bacteremia and tubo-ovarian abscess after an in vitro fertilization (IVF) procedure.	Van Hoecke F, Beuckelaers E, Lissens P, Boudewijns M.	J Clin Microbiol	10.1128/jcm.02142-13	2013
	Association of Semen Bacteriological Profile with Infertility:- A Cross-Sectional Study in a Tertiary Care Center.	Karthikeyan M, N S K, Singh R.	J Hum Reprod Sci	10.4103/jhrs.jhrs_49_21	2021
	Almond [Prunus dulcis (Mill.) DA Webb] Processing Residual Hull as a New Source of Bioactive Compounds: Phytochemical Composition, Radical Scavenging and Antimicrobial Activities of Extracts from Italian Cultivars ('Tuono', 'Pizzuta', 'Romana').	Fabroni S, Trovato A, Ballistreri G, Tortorelli SA, Foti P, Romeo FV, Rapisarda P.	Molecules	10.3390/molecules28020605	2023
	Trichoderma citrinoviride: Anti-Fungal Biosurfactants Production Characteristics.	Piegza M, Szura K, Laba W.	Front Bioeng Biotechnol	10.3389/fbioe.2021.778701	2021
	Key bacterial taxa determine longitudinal dynamics of aromatic amino acid catabolism in infants' gut.	Laursen MF, Sinha AK, Sinha AK, Pedersen M, Roager HM.	Gut Microbes	10.1080/19490976.2023.2221426	2023
Enzymology	Intrauterine contraceptive device-associated pelvic actinomycosis caused by Actinomyces urogenitalis.	Elsayed S, George A, Zhang K.	Anaerobe	10.1016/j.anaerobe.2005.12.004	2006
	Complete Genome Sequence of Corynebacterium imitans DSM 44264, Isolated from a Five-Month-Old Boy with Suspected Pharyngeal Diphtheria.	Mollmann S, Albersmeier A, Ruckert C, Tauch A.	Genome Announc	10.1128/genomea.01210-14	2014
Genetics	Metagenomic profile of the fecal microbiome of preterm infants consuming mother's own milk with bovine milk-based fortifier or infant formula: a cross-sectional study.	Aguilar-Lopez M, Wetzel C, MacDonald A, Ho TTB, Donovan SM.	Am J Clin Nutr	10.1093/ajcn/nqac081	2022
	Rapid identification of oral Actinomyces species cultivated from subgingival biofilm by MALDI-TOF-MS.	Stingu CS, Borgmann T, Rodloff AC, Vielkind P, Jentsch H, Schellenberger W, Eschrich K.	J Oral Microbiol	10.3402/jom.v7.26110	2015
Pathogenicity	Voriconazole-Based Salts Are Active against Multidrug-Resistant Human Pathogenic Yeasts.	Szepinski E, Martynow D, Szweda P, Milewska MJ, Milewski S.	Molecules	10.3390/molecules24203635	2019
	Cytotoxic hypothemycin analogues from Hypomyces subiculosus.	Wee JL, Sundermann K, Licari P, Galazzo J.	J Nat Prod	10.1021/np060258o	2006
	A green approach to develop zeolite-thymol antimicrobial composites: analytical characterization and antimicrobial activity evaluation.	Cometa S, Bonifacio MA, Bellissimo A, Pinto L, Petrella A, De Vietro N, Iannaccone G, Baruzzi F, De Giglio E.	Heliyon	10.1016/j.heliyon.2022.e09551	2022
Phylogeny	Urinary Microbiome of Reproductive-Age Asymptomatic European Women.	Ugarcina Perovic S, Ksiezarek M, Rocha J, Cappelli EA, Sousa M, Ribeiro TG, Grosso F, Peixe L.	Microbiol Spectr	10.1128/spectrum.01308-22	2022
Metabolism	Evaluating the potential of residual Pap test fluid as a resource for the metaproteomic analysis of the cervical-vaginal microbiome.	Afiuni-Zadeh S, Boylan KLM, Jagtap PD, Griffin TJ, Rudney JD, Peterson ML, Skubitz APN.	Sci Rep	10.1038/s41598-018-29092-4	2018
Genetics	Proteogenomics analysis of CUG codon translation in the human pathogen Candida albicans.	Muhlhausen S, Schmitt HD, Plessmann U, Mienkus P, Sternisek P, Perl T, Weig M, Urlaub H, Bader O, Kollmar M.	BMC Biol	10.1186/s12915-021-01197-9	2021
Metabolism	The lower genital tract microbiota in relation to cytokine-, SLPI- and endotoxin levels: application of checkerboard DNA-DNA hybridization (CDH).	Nikolaitchouk N, Andersch B, Falsen E, Strombeck L, Mattsby-Baltzer I.	APMIS	10.1111/j.1600-0463.2008.00808.x	2008
	Genetic manipulations of nonmodel gut microbes.	Jin WB, Guo CJ.	Imeta	10.1002/imt2.216	2024
	Streptomyces catenulae as a Novel Marine Actinobacterium Mediated Silver Nanoparticles: Characterization, Biological Activities, and Proposed Mechanism of Antibacterial Action.	Khalil MA, El-Shanshoury AER, Alghamdi MA, Sun J, Ali SS.	Front Microbiol	10.3389/fmicb.2022.833154	2022
	Genome resolved analysis of a premature infant gut microbial community reveals a Varibaculum cambriense genome and a shift towards fermentation-based metabolism during the third week of life.	Brown CT, Sharon I, Thomas BC, Castelle CJ, Morowitz MJ, Banfield JF.	Microbiome	10.1186/2049-2618-1-30	2013
Genetics	Beyond the ABCs-Discovery of Three New Plasmid Types in Rhodobacterales (RepQ, RepY, RepW).	Freese HM, Ringel V, Overmann J, Petersen J.	Microorganisms	10.3390/microorganisms10040738	2022
Pathogenicity	Antibacterial, antifungal, and antiviral effects of three essential oil blends.	Brochot A, Guilbot A, Haddioui L, Roques C.	Microbiologyopen	10.1002/mbo3.459	2017
	Diagnostic and prognostic potential of the microbiome in ovarian cancer treatment response.	Asangba AE, Chen J, Goergen KM, Larson MC, Oberg AL, Casarin J, Multinu F, Kaufmann SH, Mariani A, Chia N, Walther-Antonio MRS.	Sci Rep	10.1038/s41598-023-27555-x	2023
	The Role of Gene Elongation in the Evolution of Histidine Biosynthetic Genes.	Del Duca S, Chioccioli S, Vassallo A, Castronovo LM, Fani R.	Microorganisms	10.3390/microorganisms8050732	2020
Metabolism	Optimized Production of Xylitol from Xylose Using a Hyper-Acidophilic Candida tropicalis.	Tamburini E, Costa S, Marchetti MG, Pedrini P.	Biomolecules	10.3390/biom5031979	2015
	Astaxanthin Synthesis by Yeast Xanthophyllomyces dendrorhous and its Mutants on Media Based on Plant Extracts.	Stachowiak B.	Indian J Microbiol	10.1007/s12088-012-0306-7	2012
Phylogeny	Related giant viruses in distant locations and different habitats: Acanthamoeba polyphaga moumouvirus represents a third lineage of the Mimiviridae that is close to the megavirus lineage.	Yoosuf N, Yutin N, Colson P, Shabalina SA, Pagnier I, Robert C, Azza S, Klose T, Wong J, Rossmann MG, La Scola B, Raoult D, Koonin EV.	Genome Biol Evol	10.1093/gbe/evs109	2012
	Vertebrate odorant binding proteins as antimicrobial humoral components of innate immunity for pathogenic microorganisms.	Bianchi F, Flisi S, Careri M, Riboni N, Resimini S, Sala A, Conti V, Mattarozzi M, Taddei S, Spadini C, Basini G, Grolli S, Cabassi CS, Ramoni R.	PLoS One	10.1371/journal.pone.0213545	2019
	Antimicrobial Activity and Identification of the Biosynthetic Gene Cluster of X-14952B From Streptomyces sp. 135.	Li N, Chen S, Yan Z, Han J, Ta Y, Pu T, Wang Y.	Front Microbiol	10.3389/fmicb.2021.703093	2021
	Performance of a New Rapid Immunoassay Test Kit for Point-of-Care Diagnosis of Significant Bacteriuria.	Stapleton AE, Cox ME, DiNello RK, Geisberg M, Abbott A, Roberts PL, Hooton TM.	J Clin Microbiol	10.1128/jcm.00353-15	2015
	Baikalomycins A-C, New Aquayamycin-Type Angucyclines Isolated from Lake Baikal Derived Streptomyces sp. IB201691-2A.	Voitsekhovskaia I, Paulus C, Dahlem C, Rebets Y, Nadmid S, Zapp J, Axenov-Gribanov D, Ruckert C, Timofeyev M, Kalinowski J, Kiemer AK, Luzhetskyy A.	Microorganisms	10.3390/microorganisms8050680	2020
	Genome sequence of a native-feather degrading extremely thermophilic Eubacterium, Fervidobacterium islandicum AW-1.	Lee YJ, Jeong H, Park GS, Kwak Y, Lee SJ, Lee SJ, Park MK, Kim JY, Kang HK, Shin JH, Lee DW.	Stand Genomic Sci	10.1186/s40793-015-0063-4	2015
	Characterization of two monoclonal antibodies against secretory proteinase of Candida tropicalis DSM 4238.	Borg-von Zepelin M, Gruness V.	J Med Vet Mycol	10.1080/02681219380000021	1993
Metabolism	Development of a keratinase activity assay using recombinant chicken feather keratin substrates.	Jin HS, Park SY, Kim K, Lee YJ, Nam GW, Kang NJ, Lee DW.	PLoS One	10.1371/journal.pone.0172712	2017
	Sunspot dynamics are reflected in human physiology and pathophysiology.	Hrushesky WJ, Sothern RB, Du-Quiton J, Quiton DF, Rietveld W, Boon ME.	Astrobiology	10.1089/ast.2010.0574	2011
	Evaluation of Pyrolysis Oil as Carbon Source for Fungal Fermentation.	Dorsam S, Kirchhoff J, Bigalke M, Dahmen N, Syldatk C, Ochsenreither K.	Front Microbiol	10.3389/fmicb.2016.02059	2016
Pathogenicity	Enhancement of biocontrol efficacy of Pichia carribbica to postharvest diseases of strawberries by addition of trehalose to the growth medium.	Zhao L, Zhang H, Li J, Cui J, Zhang X, Ren X.	Int J Mol Sci	10.3390/ijms13033916	2012
Phylogeny	Phenotypic identification of Actinomyces and related species isolated from human sources.	Sarkonen N, Kononen E, Summanen P, Kononen M, Jousimies-Somer H.	J Clin Microbiol	10.1128/jcm.39.11.3955-3961.2001	2001
Phylogeny	Purification and characterization of keratinase from a new Bacillus subtilis strain.	Cai CG, Chen JS, Qi JJ, Yin Y, Zheng XD.	J Zhejiang Univ Sci B	10.1631/jzus.b0820128	2008
Enzymology	Evaluation of the Bruker MALDI Biotyper for identification of Gram-positive rods: development of a diagnostic algorithm for the clinical laboratory.	Schulthess B, Bloemberg GV, Zbinden R, Bottger EC, Hombach M.	J Clin Microbiol	10.1128/jcm.02399-13	2014
Metabolism	Conserved evolutionary units in the heme-copper oxidase superfamily revealed by novel homologous protein families.	Pei J, Li W, Kinch LN, Grishin NV.	Protein Sci	10.1002/pro.2503	2014
Enzymology	Quantification of fungal DNA by using fluorescence resonance energy transfer and the light cycler system.	Loeffler J, Henke N, Hebart H, Schmidt D, Hagmeyer L, Schumacher U, Einsele H.	J Clin Microbiol	10.1128/jcm.38.2.586-590.2000	2000
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Enzymology	Characterization of a keratinolytic serine proteinase from Streptomyces pactum DSM 40530.	Bockle B, Galunsky B, Muller R.	Appl Environ Microbiol	10.1128/aem.61.10.3705-3710.1995	1995
Genetics	Genome-Based Taxonomic Classification of the Phylum Actinobacteria.	Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M.	Front Microbiol	10.3389/fmicb.2018.02007	2018
	Identification and genomic analysis of Pseudosulfitobacter koreense sp. nov. isolated from toxin-producing dinoflagellate Alexandrium pacificum.	Jiang Y, Li Z.	Arch Microbiol	10.1007/s00203-023-03583-z	2023
	A novel endophytic species, Streptomyces colwelliae sp. nov., isolated from root nodule of Alnus glutinosa.	Nouioui I, Gomez-Escribano JP, Potter G, Jando M, Wolf J, Neumann-Schaal M, Mast Y.	BMC Microbiol	10.1186/s12866-025-04290-z	2025
Phylogeny	Streptomyces tunisialbus sp. nov., a novel Streptomyces species with antimicrobial activity.	Ayed A, Slama N, Mankai H, Bachkouel S, ElKahoui S, Tabbene O, Limam F.	Antonie Van Leeuwenhoek	10.1007/s10482-018-1046-4	2018
Phylogeny	Corynebacterium gottingense sp. nov., isolated from a clinical patient.	Atasayar E, Zimmermann O, Sproer C, Schumann P, Gross U.	Int J Syst Evol Microbiol	10.1099/ijsem.0.002322	2017
	Taxonomic description of Micromonospora reichwaldensis sp. nov. and its biosynthetic and plant growth-promoting potential.	Nouioui I, Zimmermann A, Gomez Escribano JP, Jando M, Potter G, Neumann-Schaal M, Mast Y.	Microbiol Spectr	10.1128/spectrum.02129-24	2025
Phylogeny	Actinomyces vulturis sp. nov., isolated from Gyps himalayensis.	Meng X, Lu S, Wang Y, Lai XH, Wen Y, Jin D, Yang J, Bai X, Zhang G, Pu J, Lan R, Xu J.	Int J Syst Evol Microbiol	10.1099/ijsem.0.001851	2017
Phylogeny	Nonomuraea flavida sp. nov., a novel species of soil actinomycete isolated from Aconitum napellus rhizosphere.	Chen S, Shi J, Li D, Wu Y, Huang Y.	Int J Syst Evol Microbiol	10.1099/ijsem.0.000538	2015
Phylogeny	Actinomyces haliotis sp. nov., a bacterium isolated from the gut of an abalone, Haliotis discus hannai.	Hyun DW, Shin NR, Kim MS, Kim PS, Kim JY, Whon TW, Bae JW.	Int J Syst Evol Microbiol	10.1099/ijs.0.055350-0	2014
Genetics	Sellimonas caecigallum sp. nov., description and genome sequence of a new member of the Sellimonas genus isolated from the cecum of feral chicken.	Wongkuna S, Ghimire S, Antony L, Chankhamhaengdecha S, Janvilisri T, Scaria J.	New Microbes New Infect	10.1016/j.nmni.2019.100626	2020
Phylogeny	Streptomyces iranensis sp. nov., isolated from soil.	Hamedi J, Mohammadipanah F, Klenk HP, Potter G, Schumann P, Sproer C, von Jan M, Kroppenstedt RM.	Int J Syst Evol Microbiol	10.1099/ijs.0.015339-0	2010
Metabolism	Gracilibacter thermotolerans gen. nov., sp. nov., an anaerobic, thermotolerant bacterium from a constructed wetland receiving acid sulfate water.	Lee YJ, Romanek CS, Mills GL, Davis RC, Whitman WB, Wiegel J.	Int J Syst Evol Microbiol	10.1099/ijs.0.64040-0	2006
Phylogeny	Characterization of isolates of members of the genus Actinomyces from Marmota himalayana: description of Actinomyces faecalis sp. nov., Actinomyces respiraculi sp. nov., and Actinomyces trachealis sp. nov.	Zhou J, Zhang S, Zhang G, Yang J, Lai XH, Pu J, Jin D, Lu S, Huang Y, Zhu W, Huang Y, Xu M, Lei W, Cheng Y, Liu L, Xu J	Int J Syst Evol Microbiol	10.1099/ijsem.0.004875	2021
Phylogeny	Characterization of Actinomyces isolates from samples from the human urogenital tract: description of Actinomyces urogenitalis sp. nov.	Nikolaitchouk N, Hoyles L, Falsen E, Grainger JM, Collins MD	Int J Syst Evol Microbiol	10.1099/00207713-50-4-1649	2000

References

#5819	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15434
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#23113	N Nikolaitchouk, L Hoyles, E Falsen, J M Grainger, M D Collins: Characterization of Actinomyces isolates from samples from the human urogenital tract: description of Actinomyces urogenitalis sp. nov.. IJSEM 50: 1649 - 1654 2000 ( DOI 10.1099/00207713-50-4-1649 , PubMed 10939672 )
#36438	; Curators of the CIP;
#54404	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 38702
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#68379	Automatically annotated from API Coryne .
#68380	Automatically annotated from API rID32A .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#123755	Collection of Institut Pasteur ; Curators of the CIP; CIP 106421
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Actinomyces urogenitalis (DSM 15434, CCUG 38702, CIP 106421)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

Pathway annotation

API coryne

API zym

API rID32A

API biotype100

Isolation, sampling and environmental information

Isolation source categories

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Sequence information

Genome sequences

Genome browser: GCA_000159035

16S sequences

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Literature

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