Phaselicystis flava (DSM 21295, NCCB 100230, SBKo 001)

Name: Phaselicystis flava (DSM 21295, NCCB 100230, SBKo 001)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 17791

Type strain

Strain Designation SBKo 001

Culture col. no. DSM 21295 NCCB 100230 SBKo 001

NCBI tax ID(s) 525924

Special Collections DSMZ Literature strains Reichenbach collection

History <- R. Garcia, Pharmaceutical Biotechnology, Saarland University

Links

Phaselicystis flava SBKo 001 is an aerobe, spore-forming, Gram-negative bacterium that was isolated from forest soil.

spore-forming Gram-negative rod-shaped aerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 397549

NCCB 100230,DSM 21295

@ref 20215

Last LPSN update 2026-02-09 11:22:18

Domain Bacteria

Phylum Pseudomonadota

Class Deltaproteobacteria

Order Polyangiales

Family Polyangiaceae

Genus Phaselicystis

Species Phaselicystis flava

Full scientific name Phaselicystis flava Garcia et al. 2009

BacDive ID	Other strains from **Phaselicystis flava** (1)	Type strain
17790	P. flava NOSO-1, DSM 53757

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape
29011	negative	7 µm	1.25 µm	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
15608	VY/2 AGAR (DSMZ Medium 9)		Medium recipe at MediaDive	Name: VY/2 AGAR (DSMZ Medium 9) Composition: Agar 15.0 g/l Baker's yeast 5.0 g/l CaCl2 x 2 H2O 1.36 g/l Vitamin B12 0.0005 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
15608	positive	growth	30

Physiology and metabolism

Oxygen tolerance

29011

Oxygen toleranceaerobe

Spore formation

29011

Spore formationyes

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
29011	22599 ChEBI	arabinose	+	carbon source
29011	28757 ChEBI	fructose	+	carbon source
29011	37684 ChEBI	mannose	+	carbon source
29011	17992 ChEBI	sucrose	+	carbon source

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
15608	forest soil	Mt Makiling Forest Reserve, Laguna Province	Philippines	PHL	Asia

Taxonmaps

69479

Global distribution of 16S sequence EU545827 (>99% sequence identity) for Phaselicystis flava subclade from Microbeatlas

Aquatic Samples	1620
Soil Samples	11269
Animal Samples	500
Plant Samples	1356
Total Samples	14745

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
15608	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
15608	Phaselicystis flava strain SBKo001 16S ribosomal RNA gene, partial sequence	EU545827	1539		525924

GC content

@ref	GC-content (mol%)	Method
15608	69.2	high performance liquid chromatography (HPLC)
29011	69.2

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Phaselicystis flava gen. nov., sp. nov., an arachidonic acid-containing soil myxobacterium, and the description of Phaselicystidaceae fam. nov.	Garcia RO, Reichenbach H, Ring MW, Muller R	Int J Syst Evol Microbiol	10.1099/ijs.0.003814-0	2009

References

#15608	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21295
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#25443	IJSEM 1524 2009 ( DOI 10.1099/ijs.0.003814-0 , PubMed 19502347 )
#29011	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25443
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Phaselicystis flava (DSM 21295, NCCB 100230, SBKo 001)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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