Dethiosulfovibrio marinus (DSM 12537, JCM 15824, WS 100)

Name: Dethiosulfovibrio marinus (DSM 12537, JCM 15824, WS 100)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 17771

Type strain

Strain Designation WS 100

Culture col. no. DSM 12537 JCM 15824 WS 100

NCBI tax ID(s) 133532

Special Collections DSMZ JCM

History DSMZ <- A. Surkov, Russian Academy of Sciences, Inst. of Microbiology, Moscow, Russia; WS100 <- G. A. Dubinina {1992} JCM <-- DSM 12537 <-- A. Surkov WS100.

Links

Dethiosulfovibrio marinus WS 100 is an anaerobe bacterium that was isolated from Thiodendron bacterial sulfur mat.

anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 49313

DSM 12537,JCM 15824

@ref 20215

Last LPSN update 2026-05-29 08:29:05

Domain Bacteria

Phylum Synergistota

Class Synergistia

Order Synergistales

Family Dethiosulfovibrionaceae

Genus Dethiosulfovibrio

Species Dethiosulfovibrio marinus

Full scientific name Dethiosulfovibrio marinus Surkov et al. 2001

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
4758	DETHIOSULFOVIBRIO MEDIUM (DSMZ Medium 906)		Medium recipe at MediaDive	Name: DETHIOSULFOVIBRIO MEDIUM (DSMZ Medium 906) Composition: NaCl 19.98 g/l Yeast extract 4.99501 g/l MgCl2 x 6 H2O 2.997 g/l Na3-citrate x 5 H2O 2.997 g/l Na2S2O3 x 5 H2O 2.4975 g/l Peptone 1.998 g/l KH2PO4 0.999001 g/l Na2S x 9 H2O 0.499501 g/l CaCl2 x 2 H2O 0.1998 g/l HCl 0.0024975 g/l FeCl2 x 4 H2O 0.0014985 g/l Sodium resazurin 0.0004995 g/l CoCl2 x 6 H2O 0.00018981 g/l MnCl2 x 4 H2O 9.99001e-05 g/l ZnCl2 6.99301e-05 g/l Na2MoO4 x 2 H2O 3.5964e-05 g/l NiCl2 x 6 H2O 2.3976e-05 g/l H3BO3 5.99401e-06 g/l CuCl2 x 2 H2O 1.998e-06 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
4758	positive	growth	30
67770	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
4758	anaerobe
125438	anaerobe	96.272

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Microbial community	#Microbial mat
#Host	#Microbial	#Bacteria
#Condition	#Sulfuric	-

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
4758	Thiodendron bacterial sulfur mat	Thiodendron	White Sea, Kandalaksha Bay, Murmansk region	Russia	RUS	Europe
67770	'Thiodendoron' bacterial sulfur mats in the littoral zone at Kandalaksha Bay	Thiodendoron		Russia	RUS

Taxonmaps

69479

Global distribution of 16S sequence AF234544 (>99% sequence identity) for Dethiosulfovibrio from Microbeatlas

Aquatic Samples	971
Soil Samples	86
Animal Samples	275
Plant Samples	42
Total Samples	1374

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
4758	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM2156887v1 assembly for Dethiosulfovibrio marinus DSM 12537	scaffold	GCA_021568875	133532.3	8046611910	133532	67.18

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
4758	Dethiosulfovibrio marinus strain WS 100 16S ribosomal RNA gene, partial sequence	AF234544	1393		133532

GC content

@ref	GC-content (mol%)	Method
4758	51.8	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Dethiosulfovibrio marinus DSM 12537
NCBI: GCA_021568875.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	81.49	no
125438	anaerobic	anaerobicⓘ	yes	96.27	yes
125438	aerobic	aerobicⓘ	no	95.18	yes
125438	spore-forming	spore-formingⓘ	no	72.92	no
125438	thermophilic	thermophileⓘ	no	83.25	yes
125438	flagellated	motile2+ⓘ	yes	65.32	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Sulphur isotope fractionation during the reduction of elemental sulphur and thiosulphate by Dethiosulfovibrio spp.	Surkov AV, Bottcher ME, Kuever J	Isotopes Environ Health Stud	10.1080/10256016.2011.626525	2012
Phylogeny	Dethiosulfovibrio russensis sp. nov., Dethosulfovibrio marinus sp. nov. and Dethosulfovibrio acidaminovorans sp. nov., novel anaerobic, thiosulfate- and sulfur-reducing bacteria isolated from 'Thiodendron' sulfur mats in different saline environments.	Surkov AV, Dubinina GA, Lysenko AM, Glockner FO, Kuever J	Int J Syst Evol Microbiol	10.1099/00207713-51-2-327	2001

References

#4758	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 12537
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Dethiosulfovibrio marinus (DSM 12537, JCM 15824, WS 100)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_021568875

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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