Allobogoriella caseilytica (DSM 11294, CCUG 39178, HKI 88)

Name: Allobogoriella caseilytica (DSM 11294, CCUG 39178, HKI 88)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1770

Type strain

Strain Designation 2017-12

Culture col. no. DSM 11294 CCUG 39178 HKI 88 2017-12 NBRC 106158 8 more

NCBI tax ID(s) 56055

Special Collections DSMZ CCUG JCM CIP Wink compendium Literature strains JMRC

History DSMZ <- I. Groth, 2017-12 (= HKI 88) JCM <-- CIP 105404 <-- I. Groth HKI 0088 (=strain 2017-12). CIP <- 1998, I. Groth, Hans Knöll Inst., Jena, Germany: strain HKI 0088 <- I. Groth: strain 2017-12

Links

Allobogoriella caseilytica 2017-12 is a microaerophile, Gram-positive, rod-shaped bacterium that was isolated from soda soil.

Gram-positive rod-shaped microaerophile genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 43923

ATCC 700413,DSM 11294,CCUG 39178,CIP 105404,JCM 11479,NBRC 106158

@ref 20215

Last LPSN update 2026-05-29 08:25:20

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Allobogoriellaceae

Genus Allobogoriella

Species Allobogoriella caseilytica

Full scientific name Allobogoriella caseilytica (Groth et al. 1997) Deshmukh and Oren 2025

Synonyms (1)

Bogoriella caseilytica

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
23155	positive	1.0-2.5 µm	0.5-0.8 µm	rod-shaped
117202	positive			rod-shaped
125439	positive				92.949

Colony morphology

@ref	Colony size	Colony color	Colony shape	Incubation period	Medium used
18434		Transparent		10-14 days	ISP 2
18434		Signal yellow (1003)		10-14 days	ISP 3
18434		Beige (1001)		10-14 days	ISP 4
18434		Beige (1001)		10-14 days	ISP 6
23155	1-3 mm	pale yellow to intense yellow	circular	6 days	solid medium A

Multicellular morphology

@ref	Forms multicellular complex	Medium name
18434		ISP 2
18434		ISP 3
18434		ISP 4
18434		ISP 6

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
4284	BOGORIELLA MEDIUM (DSMZ Medium 785)	Medium recipe at MediaDive	Name: BOGORIELLA MEDIUM (DSMZ Medium 785) Composition: NaCl 40.0 g/l Glucose 10.0 g/l Na2CO3 10.0 g/l Yeast extract 5.0 g/l Peptone 5.0 g/l KH2PO4 1.0 g/l MgSO4 x 7 H2O 0.2 g/l Distilled water
18434	ISP 2		Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
18434	ISP 3		Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
18434	ISP 4		Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml
18434	ISP 6		Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes
23155	solid medium A
39284	MEDIUM 113 - for Bacillus		Distilled water make up to (900.000 ml);Columbia agar (39.000 g);Solution 1 - M00343 (100.000 ml)
117202	CIP Medium 113	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
4284	positive	growth	30
23155	negative	growth	50
23155	positive	optimum	28-37
39284	positive	growth	30
54685	positive	growth	20-30
67770	positive	growth	28
117202	positive	growth	15-41
117202	negative	growth	10
117202	negative	growth	45

Culture pH

@ref	Ability	Type	PH	PH range
23155	positive	optimum	9-10	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
23155	microaerophile
23155	aerobe
54685	aerobe
117202	obligate aerobe
125439	facultative anaerobe	95.949

Spore formation

23155

Spore formationno

Compound production

20216

Compound2-Benzyl-4-chlor-phenol-1

Halophily

@ref	Halophily level	Salt	Growth	Tested relation	Concentration
18434		NaCl	positive	maximum	5 %
23155	halotolerant	NaCl	positive	growth	8 %
23155		NaCl	inconsistent	growth	>8 %
117202		NaCl	positive	growth	0-10 %

Observation

67770

Observationquinones: MK-8(H₄), MK-9(H₄)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
23155	16651 ChEBI	(S)-lactate	-	respiration
23155	62064 ChEBI	2,3-butanediol	-	respiration
23155	17256 ChEBI	2-deoxyadenosine	-	respiration
23155	64552 ChEBI	2-hydroxybutyrate	+	respiration
23155	30916 ChEBI	2-oxoglutarate	-	respiration
23155	28644 ChEBI	2-oxopentanoate	-	respiration
23155	37054 ChEBI	3-hydroxybutyrate	-	respiration
23155	73918 ChEBI	3-O-methyl-D-glucose	+	respiration
23155	16724 ChEBI	4-hydroxybutyrate	-	respiration
23155	18101 ChEBI	4-hydroxyphenylacetic acid	-	respiration
23155	30089 ChEBI	acetate	-	carbon source
23155	30089 ChEBI	acetate	-	respiration
23155	16708 ChEBI	adenine	-	hydrolysis
23155	16708 ChEBI	adenine	-	other
23155	16335 ChEBI	adenosine	-	respiration
23155	40585 ChEBI	alpha-cyclodextrin	+	respiration
23155	17925 ChEBI	alpha-D-glucose	+	respiration
23155	36219 ChEBI	alpha-lactose	+	respiration
23155	16027 ChEBI	amp	-	respiration
23155	27613 ChEBI	amygdalin	+	respiration
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
23155	18305 ChEBI	arbutin	+	respiration
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68368	29016 ChEBI	arginine	+	hydrolysis	from API 20E
23155	16150 ChEBI	benzoate	-	carbon source
23155	495055 ChEBI	beta-cyclodextrin	+	respiration
23155		casein	+	other
23155	17057 ChEBI	cellobiose	+	builds acid from
23155	17057 ChEBI	cellobiose	+	respiration
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
23155	16383 ChEBI	cis-aconitate	-	carbon source
23155	16947 ChEBI	citrate	-	carbon source
68368	16947 ChEBI	citrate	+	assimilation	from API 20E
23155	15570 ChEBI	D-alanine	-	respiration
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
23155	18333 ChEBI	D-arabitol	+	respiration
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
23155	15824 ChEBI	D-fructose	+	respiration
23155	15824 ChEBI	D-fructose	+/-	builds acid from
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
23155	78697 ChEBI	D-fructose 6-phosphate	-	respiration
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
23155	12936 ChEBI	D-galactose	+	builds acid from
23155	12936 ChEBI	D-galactose	+	respiration
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
23155	18024 ChEBI	D-galacturonic acid	+/-	respiration
23155	8391 ChEBI	D-gluconate	-	respiration
23155	17634 ChEBI	D-glucose	+	builds acid from
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
23155	14314 ChEBI	D-glucose 6-phosphate	-	respiration
68371	62318 ChEBI	D-lyxose	+	builds acid from	from API 50CH acid
23155	15588 ChEBI	D-malate	-	respiration
23155	16899 ChEBI	D-mannitol	+	respiration
23155	16899 ChEBI	D-mannitol	+/-	builds acid from
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
23155	16024 ChEBI	D-mannose	+	builds acid from
23155	16024 ChEBI	D-mannose	+	respiration
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
23155	27605 ChEBI	D-psicose	-	respiration
23155	63150 ChEBI	D-rhamnose	+	builds acid from
23155	16988 ChEBI	D-ribose	+	builds acid from
23155	16988 ChEBI	D-ribose	+	respiration
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
23155	17924 ChEBI	D-sorbitol	+	respiration
23155	17924 ChEBI	D-sorbitol	+/-	builds acid from
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
23155	16443 ChEBI	D-tagatose	+	respiration
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
23155	16551 ChEBI	D-trehalose	+	respiration
23155	65327 ChEBI	D-xylose	+	builds acid from
23155	65327 ChEBI	D-xylose	+	respiration
68371	65327 ChEBI	D-xylose	+	builds acid from	from API 50CH acid
23155	23652 ChEBI	dextrin	+	builds acid from
23155	23652 ChEBI	dextrin	+	respiration
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
23155	4853 ChEBI	esculin	+	hydrolysis
23155	4853 ChEBI	esculin	+	other
68379	4853 ChEBI	esculin	+	hydrolysis	from API Coryne
117202	4853 ChEBI	esculin	+	hydrolysis
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
23155	15740 ChEBI	formate	-	carbon source
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
23155	5291 ChEBI	gelatin	+	hydrolysis
23155	5291 ChEBI	gelatin	+	other
68368	5291 ChEBI	gelatin	+	hydrolysis	from API 20E
23155	28066 ChEBI	gentiobiose	+	respiration
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
23155	17234 ChEBI	glucose	-	fermentation
23155	29042 ChEBI	glucose 1-phosphate	-	respiration
23155	17754 ChEBI	glycerol	+	builds acid from
23155	17754 ChEBI	glycerol	+	respiration
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
23155	14336 ChEBI	glycerol 1-phosphate	-	respiration
23155	28087 ChEBI	glycogen	+	respiration
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
23155	73784 ChEBI	glycyl-l-glutamate	-	respiration
23155	606565 ChEBI	hippurate	-	hydrolysis
23155	606565 ChEBI	hippurate	-	other
117202	606565 ChEBI	hippurate	-	hydrolysis
23155	16136 ChEBI	hydrogen sulfide	+	other
23155	17368 ChEBI	hypoxanthine	-	hydrolysis
23155	17368 ChEBI	hypoxanthine	-	other
23155	35581 ChEBI	indole	-	other
23155	17596 ChEBI	inosine	-	respiration
23155	15443 ChEBI	inulin	-	respiration
23155	15443 ChEBI	inulin	+	builds acid from
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
23155	21217 ChEBI	L-alaninamide	-	respiration
23155	16977 ChEBI	L-alanine	-	respiration
23155	73786 ChEBI	L-alanylglycine	-	respiration
23155	30849 ChEBI	L-arabinose	+	builds acid from
23155	30849 ChEBI	L-arabinose	+	respiration
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
23155	17196 ChEBI	L-asparagine	-	respiration
23155	18287 ChEBI	L-fucose	+	respiration
68371	18287 ChEBI	L-fucose	+	builds acid from	from API 50CH acid
23155	29985 ChEBI	L-glutamate	-	respiration
23155	15589 ChEBI	L-malate	-	respiration
23155	18183 ChEBI	L-pyroglutamic acid	-	respiration
23155	62345 ChEBI	L-rhamnose	-	respiration
68371	62345 ChEBI	L-rhamnose	+	builds acid from	from API 50CH acid
23155	17115 ChEBI	L-serine	-	respiration
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
23155	75144 ChEBI	lactamide	-	respiration
23155	17716 ChEBI	lactose	+/-	builds acid from
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
23155	6359 ChEBI	lactulose	+	respiration
68368	25094 ChEBI	lysine	+	degradation	from API 20E
23155	25115 ChEBI	malate	-	carbon source
23155	17306 ChEBI	maltose	+	respiration
23155	17306 ChEBI	maltose	+/-	builds acid from
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
23155	61993 ChEBI	maltotriose	+	respiration
23155	28808 ChEBI	mannan	-	respiration
23155	6731 ChEBI	melezitose	+	respiration
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
23155	28053 ChEBI	melibiose	+	respiration
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
23155	74611 ChEBI	methyl (R)-lactate	-	respiration
23155	55507 ChEBI	methyl alpha-D-galactoside	-	respiration
23155	320061 ChEBI	methyl alpha-D-glucopyranoside	-	respiration
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
23155	43943 ChEBI	methyl alpha-D-mannoside	+	respiration
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
23155	17540 ChEBI	methyl beta-D-galactoside	+	respiration
23155	320055 ChEBI	methyl beta-D-glucopyranoside	+	respiration
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
23155	51850 ChEBI	methyl pyruvate	+	respiration
23155	75146 ChEBI	monomethyl succinate	+	respiration
23155	17268 ChEBI	myo-inositol	-	respiration
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
23155	63154 ChEBI	N-acetyl-beta-D-mannosamine	-	respiration
23155	44337 ChEBI	N-acetyl-L-glutamate	-	respiration
23155	506227 ChEBI	N-acetylglucosamine	-	respiration
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
23155	17632 ChEBI	nitrate	-	reduction
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
117202	17632 ChEBI	nitrate	-	reduction
117202	17632 ChEBI	nitrate	-	respiration
117202	16301 ChEBI	nitrite	-	reduction
68368	18257 ChEBI	ornithine	+	degradation	from API 20E
23155	18394 ChEBI	palatinose	+	respiration
68371	0 ChEBI	Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371	0 ChEBI	Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
23155	17272 ChEBI	propionate	-	respiration
23155	17148 ChEBI	putrescine	-	respiration
23155	15361 ChEBI	pyruvate	+	respiration
23155	16634 ChEBI	raffinose	+	respiration
23155	16634 ChEBI	raffinose	+/-	builds acid from
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
23155	17814 ChEBI	salicin	+	builds acid from
23155	17814 ChEBI	salicin	+	respiration
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
23155	32488 ChEBI	sedoheptulosan	-	respiration
23155	17164 ChEBI	stachyose	+/-	respiration
23155	28017 ChEBI	starch	+	builds acid from
23155	28017 ChEBI	starch	+	hydrolysis
23155	28017 ChEBI	starch	+	other
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
23155	143136 ChEBI	succinamate	-	respiration
23155	30031 ChEBI	succinate	-	carbon source
23155	30031 ChEBI	succinate	-	respiration
23155	17992 ChEBI	sucrose	+	respiration
23155	17992 ChEBI	sucrose	+/-	builds acid from
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
23155	132950 ChEBI	tartrate	-	carbon source
23155	17748 ChEBI	thymidine	-	respiration
23155	63528 ChEBI	thymidine 5'-monophosphate	-	respiration
23155	27082 ChEBI	trehalose	+	builds acid from
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
23155	27897 ChEBI	tryptophan	-	energy source
68368	27897 ChEBI	tryptophan	-	energy source	from API 20E
23155	32528 ChEBI	turanose	+	respiration
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
23155	53423 ChEBI	tween 40	-	respiration
23155	53426 ChEBI	tween 80	-	hydrolysis
23155	53426 ChEBI	tween 80	-	other
23155	53426 ChEBI	tween 80	-	respiration
23155	18186 ChEBI	tyrosine	-	hydrolysis
23155	18186 ChEBI	tyrosine	-	other
23155	16199 ChEBI	urea	-	hydrolysis
23155	16199 ChEBI	urea	-	other
68368	16199 ChEBI	urea	+	hydrolysis	from API 20E
23155	16704 ChEBI	uridine	-	respiration
23155	16695 ChEBI	uridine 5'-monophosphate	-	respiration
23155	15318 ChEBI	xanthine	-	hydrolysis
23155	15318 ChEBI	xanthine	-	other
23155	17151 ChEBI	xylitol	-	respiration
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	ChEBI	Metabolite	Sensitivity conc.	Resistance conc.
23155	28971	ampicillin	10 µg
23155	17698	chloramphenicol	30 µg
23155	100241	ciprofloxacin	5 µg
23155	48923	erythromycin	15 µg
23155	17833	gentamicin	10 µg
23155	6104	kanamycin	30 µg
23155	6472	lincomycin	2 µg
23155	7507	neomycin	30 µg
23155	71415	nitrofurantoin		300 µg
23155	7809	oxacillin	5 µg
23155	27701	oxytetracycline	30 µg
23155	18208	penicillin g	2 Unit
23155	8309	polymyxin b	300 Unit
23155	28077	rifampicin	2 µg
23155	17076	streptomycin	10 µg
23155	35358	sulfonamide		300 µg

Metabolite production

@ref	Chebi-ID	Metabolite
23155	15688 ChEBI	acetoin
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
23155	35581 ChEBI	indole
117202	35581 ChEBI	indole
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test	Indole test
23155	15688 ChEBI	acetoin	-
117202	15688 ChEBI	acetoin	-
68368	15688 ChEBI	acetoin	+			from API 20E
23155	17234 ChEBI	glucose		-
117202	17234 ChEBI	glucose		-
23155	35581 ChEBI	indole			-
68368	35581 ChEBI	indole			-	from API 20E

Enzymes

@ref	Value	Activity	Ec
23155	acid phosphatase	+	3.1.3.2
117202	alcohol dehydrogenase	-	1.1.1.1
23155	alkaline phosphatase	+	3.1.3.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
23155	alpha-fucosidase	-	3.2.1.51
68382	alpha-fucosidase	-	3.2.1.51	from API zym
23155	alpha-galactosidase	-	3.2.1.22
23155	alpha-glucosidase	+	3.2.1.20
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-glucosidase	+	3.2.1.20	from API zym
23155	alpha-mannosidase	+	3.2.1.24
117202	amylase	+
68368	arginine dihydrolase	+	3.5.3.6	from API 20E
23155	beta-galactosidase	+	3.2.1.23
68382	beta-galactosidase	+	3.2.1.23	from API zym
117202	beta-galactosidase	+	3.2.1.23
68379	beta-galactosidase	+	3.2.1.23	from API Coryne
68368	beta-galactosidase	+	3.2.1.23	from API 20E
23155	beta-glucosidase	+	3.2.1.21
68382	beta-glucosidase	+	3.2.1.21	from API zym
68379	beta-glucosidase	+	3.2.1.21	from API Coryne
23155	beta-glucuronidase	-	3.2.1.31
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
117202	caseinase	+	3.4.21.50
23155	catalase	+	1.11.1.6
117202	catalase	+	1.11.1.6
68379	catalase	+	1.11.1.6	from API Coryne
23155	chymotrypsin	-	3.4.4.5
23155	cystine arylamidase	-	3.4.11.3
23155	cytochrome oxidase	-	1.9.3.1
117202	DNase	-
23155	esterase (C 4)	+
23155	esterase lipase (C 8)	+
117202	gamma-glutamyltransferase	-	2.3.2.2
117202	gelatinase	+/-
68368	gelatinase	+		from API 20E
117202	lecithinase	-
23155	leucine arylamidase	+	3.4.11.1
68382	leucine arylamidase	+	3.4.11.1	from API zym
117202	lipase	-
23155	lipase (C 14)	-
117202	lysine decarboxylase	-	4.1.1.18
68368	lysine decarboxylase	+	4.1.1.18	from API 20E
23155	N-acetyl-beta-glucosaminidase	+	3.2.1.52
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
23155	naphthol-AS-BI-phosphohydrolase	-
117202	ornithine decarboxylase	-	4.1.1.17
68368	ornithine decarboxylase	+	4.1.1.17	from API 20E
117202	oxidase	-
117202	phenylalanine ammonia-lyase	-	4.3.1.24
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
23155	trypsin	-	3.4.21.4
23155	tryptophan deaminase	-	4.1.99.1
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
117202	tween esterase	-
117202	urease	-	3.5.1.5
68368	urease	+	3.5.1.5	from API 20E
23155	valine arylamidase	-

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	starch degradation	100	10 of 10
66794	formaldehyde oxidation	100	3 of 3
66794	vitamin K metabolism	100	5 of 5
66794	palmitate biosynthesis	100	22 of 22
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	threonine metabolism	100	10 of 10
66794	adipate degradation	100	2 of 2
66794	ppGpp biosynthesis	100	4 of 4
66794	methylglyoxal degradation	100	5 of 5
66794	coenzyme A metabolism	100	4 of 4
66794	sulfopterin metabolism	100	4 of 4
66794	suberin monomers biosynthesis	100	2 of 2
66794	folate polyglutamylation	100	1 of 1
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	cellulose degradation	100	5 of 5
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	photosynthesis	92.86	13 of 14
66794	metabolism of disaccharids	90.91	10 of 11
66794	Entner Doudoroff pathway	90	9 of 10
66794	valine metabolism	88.89	8 of 9
66794	CO2 fixation in Crenarchaeota	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	glycolysis	88.24	15 of 17
66794	ketogluconate metabolism	87.5	7 of 8
66794	glycolate and glyoxylate degradation	83.33	5 of 6
66794	NAD metabolism	83.33	15 of 18
66794	pentose phosphate pathway	81.82	9 of 11
66794	lipoate biosynthesis	80	4 of 5
66794	glycine betaine biosynthesis	80	4 of 5
66794	heme metabolism	78.57	11 of 14
66794	tetrahydrofolate metabolism	78.57	11 of 14
66794	serine metabolism	77.78	7 of 9
66794	molybdenum cofactor biosynthesis	77.78	7 of 9
66794	phenylalanine metabolism	76.92	10 of 13
66794	vitamin B1 metabolism	76.92	10 of 13
66794	gluconeogenesis	75	6 of 8
66794	acetate fermentation	75	3 of 4
66794	C4 and CAM-carbon fixation	75	6 of 8
66794	butanoate fermentation	75	3 of 4
66794	lactate fermentation	75	3 of 4
66794	glycogen biosynthesis	75	3 of 4
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	peptidoglycan biosynthesis	73.33	11 of 15
66794	flavin biosynthesis	73.33	11 of 15
66794	proline metabolism	72.73	8 of 11
66794	degradation of sugar acids	72	18 of 25
66794	citric acid cycle	71.43	10 of 14
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	glutamate and glutamine metabolism	71.43	20 of 28
66794	ubiquinone biosynthesis	71.43	5 of 7
66794	propanol degradation	71.43	5 of 7
66794	myo-inositol biosynthesis	70	7 of 10
66794	pyrimidine metabolism	68.89	31 of 45
66794	purine metabolism	67.02	63 of 94
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	octane oxidation	66.67	2 of 3
66794	IAA biosynthesis	66.67	2 of 3
66794	d-mannose degradation	66.67	6 of 9
66794	acetoin degradation	66.67	2 of 3
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	isoprenoid biosynthesis	65.38	17 of 26
66794	methionine metabolism	65.38	17 of 26
66794	degradation of pentoses	64.29	18 of 28
66794	d-xylose degradation	63.64	7 of 11
66794	non-pathway related	63.16	24 of 38
66794	isoleucine metabolism	62.5	5 of 8
66794	arginine metabolism	62.5	15 of 24
66794	degradation of sugar alcohols	62.5	10 of 16
66794	alanine metabolism	62.07	18 of 29
66794	leucine metabolism	61.54	8 of 13
66794	glycogen metabolism	60	3 of 5
66794	phenylacetate degradation (aerobic)	60	3 of 5
66794	factor 420 biosynthesis	60	3 of 5
66794	oxidative phosphorylation	59.34	54 of 91
66794	lipid metabolism	58.06	18 of 31
66794	glutathione metabolism	57.14	8 of 14
66794	degradation of hexoses	55.56	10 of 18
66794	aspartate and asparagine metabolism	55.56	5 of 9
66794	cysteine metabolism	55.56	10 of 18
66794	histidine metabolism	55.17	16 of 29
66794	lysine metabolism	52.38	22 of 42
66794	ascorbate metabolism	50	11 of 22
66794	phenylmercury acetate degradation	50	1 of 2
66794	ethanol fermentation	50	1 of 2
66794	kanosamine biosynthesis II	50	1 of 2
66794	cyclohexanol degradation	50	2 of 4
66794	quinate degradation	50	1 of 2
66794	mannosylglycerate biosynthesis	50	1 of 2
66794	tryptophan metabolism	47.37	18 of 38
66794	urea cycle	46.15	6 of 13
66794	vitamin B6 metabolism	45.45	5 of 11
66794	daunorubicin biosynthesis	44.44	4 of 9
66794	benzoyl-CoA degradation	42.86	3 of 7
66794	reductive acetyl coenzyme A pathway	42.86	3 of 7
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	D-cycloserine biosynthesis	40	2 of 5
66794	propionate fermentation	40	4 of 10
66794	metabolism of amino sugars and derivatives	40	2 of 5
66794	3-chlorocatechol degradation	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	glycine metabolism	40	4 of 10
66794	coenzyme M biosynthesis	40	4 of 10
66794	arachidonic acid metabolism	38.89	7 of 18
66794	phenylpropanoid biosynthesis	38.46	5 of 13
66794	carnitine metabolism	37.5	3 of 8
66794	dolichyl-diphosphooligosaccharide biosynthesis	36.36	4 of 11
66794	tyrosine metabolism	35.71	5 of 14
66794	cyanate degradation	33.33	1 of 3
66794	sphingosine metabolism	33.33	2 of 6
66794	sulfoquinovose degradation	33.33	1 of 3
66794	enterobactin biosynthesis	33.33	1 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	lipid A biosynthesis	33.33	3 of 9
66794	chlorophyll metabolism	33.33	6 of 18
66794	mevalonate metabolism	28.57	2 of 7
66794	carotenoid biosynthesis	27.27	6 of 22
66794	cholesterol biosynthesis	27.27	3 of 11
66794	biotin biosynthesis	25	1 of 4
66794	CMP-KDO biosynthesis	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	phenol degradation	25	5 of 20
66794	dTDPLrhamnose biosynthesis	25	2 of 8
66794	androgen and estrogen metabolism	25	4 of 16
66794	sulfate reduction	23.08	3 of 13
66794	4-hydroxymandelate degradation	22.22	2 of 9
66794	nitrate assimilation	22.22	2 of 9

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
18434	+	+	+	+	+	-	+	-	-	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
18434	-	-	-	-	-	+	+	+	+	+	+	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.
54685	-	+	-	+	-	+	+	-	+	-	-	-	+	+	+	-	+	+	+	-	+

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
18434	not determinedn.d.	+	-	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	-
54685	-	+	-	-	-	+	-	-	-	-	+	-	-	+	-	+	+	+	-	-
117202	-	+	+	+	-	+	-	-	-	-	-	+	-	+	-	+	+	+	+	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
117202	not determinedn.d.	+	-	-	+	+	+	-	-	-	+	+	+	+	-	+	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	-	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
117202	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil
#Condition	#Alkaline	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date	Sampling date
4284	soda soil	Lake Bogoria	Kenya	KEN	Africa
54685	Soda soil	Lake Bogoria	Kenya	KEN	Africa
67770	Soda soil (pH 10), near Lake Bogoria in the Kenyan-Tanzanian Rift Valley		Kenya	KEN	Africa
117202	Environment, Sample of soda soil	Bogoria lake	Kenya	KEN	Africa	1994
20216			United Kingdom	GBR	Europe		1994-08-01

Taxonmaps

69479

Global distribution of 16S sequence Y09911 (>99% sequence identity) for Bogoriella caseilytica subclade from Microbeatlas

Aquatic Samples	199
Soil Samples	539
Animal Samples	460
Plant Samples	89
Total Samples	1287

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
18434	1	German classification According to TRBA 466
4284	1	Risk group (German classification) According to TRBA 466
117202	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM375240v1 assembly for Allobogoriella caseilytica DSM 11294	contig	GCA_003752405	56055.3	2781126043	56055	79.57

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
4284	Bogoriella caseilytica 16S rRNA gene, type strain HIK 0088T	Y09911	1476		56055

GC content

@ref	GC-content (mol%)	Method
4284	70	high performance liquid chromatography (HPLC)
23155	70.0	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM375240v1 assembly for Allobogoriella caseilytica DSM 11294
NCBI: GCA_003752405

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	95.95	no
125439	gram_stain	BacteriaNetⓘ	positive	92.95	no
125439	motility	BacteriaNetⓘ	no	88.62	no
125439	spore_formation	BacteriaNetⓘ	no	84.33	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Bogoriella caseilytica strain DSM 11294
PATRIC: 56055.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	86.13	yes
125438	anaerobic	anaerobicⓘ	no	94.57	no
125438	spore-forming	spore-formingⓘ	no	78.52	no
125438	aerobic	aerobicⓘ	yes	77.93	no
125438	thermophilic	thermophileⓘ	no	93.79	yes
125438	flagellated	motile2+ⓘ	no	89.50	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Proposal of Allobogoriella gen. nov., Allobogoriella caseilytica comb. nov., Allostella gen. nov., Allostella humosa comb. nov. and Allostella vacuolata comb. nov. as replacement names for the illegitimate prokaryotic names Bogoriella, Bogoriella caseilytica, Stella, Stella humosa and Stella vacuolata, respectively.	Deshmukh UB, Oren A.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006930	2025
	The Extract of Periplaneta americana (L.) Promotes Hair Regrowth in Mice with Alopecia by Regulating the FOXO/PI3K/AKT Signaling Pathway and Skin Microbiota.	Guan T, Yang X, Hong C, Zhang Z, Xiao P, Yang Y, Zhang C, He Z.	Curr Issues Mol Biol	10.3390/cimb47080619	2025
Genetics	Comparative metagenomic analysis from Sundarbans ecosystems advances our understanding of microbial communities and their functional roles.	Das BK, Chakraborty HJ, Kumar V, Rout AK, Patra B, Das SK, Behera BK.	Sci Rep	10.1038/s41598-024-67240-1	2024
Phylogeny	Bogoriella caseilytica gen. nov., sp. nov., a new alkaliphilic actinomycete from a soda lake in Africa.	Groth I, Schumann P, Rajney FA, Martin K, Schuetze B, Augsten K	Int J Syst Bacteriol	10.1099/00207713-47-3-788	1997

References

#4284	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11294
#18434	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the JMRC: Jena Microbial Resource Collection (JMRC):
#23155	Ingrid Groth, P. Schumann, F. A. Rainey, Karin Martin, Barbara Schuetze, K. Augsten: Bogoriella caseilytica gen. nov., sp. nov., a New Alkaliphilic Actinomycete from a Soda Lake in Africa. IJSEM 47: 788 - 794 1997 ( DOI 10.1099/00207713-47-3-788 , PubMed 9226911 )
#39284	; Curators of the CIP;
#54685	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 39178
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68368	Automatically annotated from API 20E .
#68371	Automatically annotated from API 50CH acid .
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#117202	Collection of Institut Pasteur ; Curators of the CIP; CIP 105404
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Content

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Allobogoriella caseilytica (DSM 11294, CCUG 39178, HKI 88)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multicellular morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Compound production

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

Pathway annotation

API 20E

API coryne

API zym

API 50CHac

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_003752405

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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