Name: Actinomyces bowdenii M1327/95/1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 177

Type strain:

Species: Actinomyces bowdenii

Strain Designation: M1327/95/1, M1327/96/1

Culture col. no.: DSM 15435, CCUG 37421, CIP 106647

Strain history: CIP <- 2000, CCUG <- 1997, M.D. Collins , IFR, Reading, UK: strain M1327/96/1 <- G. Foster, SAC, Vet. Div., Inverness, UK

NCBI tax ID(s): 131109 (species)

SI-ID 13433

LMG 19645, CCUG 37421, CIP 106647, DSM 15435, KCTC 15525

Other strains from Actinomyces bowdenii

A. bowdenii 21_37, ERD15F, DSM 28589
A. bowdenii CCUG 34477
A. bowdenii CCUG 39734
A. bowdenii CCUG 42137

Section

Actinomyces bowdenii M1327/95/1 is a microaerophile, mesophilic, Gram-positive animal pathogen that was isolated from dog, abscess under the mandible.

Gram-positive
rod-shaped
animal pathogen
mesophilic
microaerophile
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Actinomycetales*
	Family	*Actinomycetaceae*
	Genus	*Actinomyces*
	Species	**Actinomyces bowdenii**
	Full Scientific Name (LPSN)	Actinomyces bowdenii Pascual et al. 1999

Information on morphological and physiological properties Morphology

[Ref.: #23112]	Gram stain	positive
[Ref.: #116979]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #23112]	Cell length	2.0-4.0 µm

[Ref.: #23112]	Cell shape	rod-shaped
[Ref.: #116979]	Cell shape	rod-shaped

[Ref.: #23112]	Motility	no
[Ref.: #116979]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %91.454

[Ref.: #23112]	Type of hemolysis	gamma
[Ref.: #23112]	Colony size	2.0 mm
[Ref.: #23112]	Colony color	greyish-white
[Ref.: #23112]	Incubation period	1-2 days
[Ref.: #23112]	Cultivation medium used	blood agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5820]

Culture medium

BHI/2 MEDIUM (DSMZ Medium 217)

[Ref.: #5820]

Culture medium growth

[Ref.: #5820]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5820]

Culture medium composition

expand / minimize

[Ref.: #5820]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #5820]

Culture medium growth

[Ref.: #5820]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5820]

Culture medium composition

expand / minimize

[Ref.: #23112]

Culture medium

blood agar

[Ref.: #23112]

Culture medium growth

[Ref.: #35971]

Culture medium

MEDIUM 6 - Columbia agar with 10 % horse blood

[Ref.: #35971]

Culture medium growth

[Ref.: #35971]

Culture medium composition

expand / minimize

[Ref.: #116979]

Culture medium

CIP Medium 6

[Ref.: #116979]

Culture medium growth

[Ref.: #116979]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #5820]		growth	37 °C
[Ref.: #23112]		growth	37 °C
[Ref.: #35971]		growth	37 °C
[Ref.: #116979]		growth	25-41 °C
[Ref.: #116979]	no	growth	10 °C
[Ref.: #116979]	no	growth	45 °C

[Ref.: #5820]	Temperature range	mesophilic
[Ref.: #23112]	Temperature range	mesophilic
[Ref.: #35971]	Temperature range	mesophilic
[Ref.: #116979]	Temperature range	psychrophilic
[Ref.: #116979]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #5820]	Oxygen tolerance	microaerophile
[Ref.: #23112]	Oxygen tolerance	facultative anaerobe
[Ref.: #116979]	Oxygen tolerance	facultative anaerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %91
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.984

	Salt	Tested relation		Salt conc.
[Ref.: #116979]	NaCl		growth	0-2	%
[Ref.: #116979]	NaCl	no	growth	4	%
[Ref.: #116979]	NaCl	no	growth	6	%
[Ref.: #116979]	NaCl	no	growth	8	%
[Ref.: #116979]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23112]	acetoin ChEBI	-	other
[Ref.: #68371]	amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	arbutin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #116979]	citrate ChEBI	-	carbon source
[Ref.: #23112]	cyclodextrin ChEBI	-	builds acid from
[Ref.: #23112]	D-arabinose ChEBI	-	fermentation
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23112]	D-arabitol ChEBI	-	builds acid from
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fructose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-galactose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23112]	D-glucose ChEBI	+	builds acid from
[Ref.: #68371]	D-glucose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23112]	D-xylose ChEBI	-	builds acid from
[Ref.: #23112]	D-xylose ChEBI	-	fermentation
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23112]	esculin ChEBI	+	hydrolysis
[Ref.: #116979]	esculin ChEBI	+	hydrolysis
[Ref.: #68371]	esculin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23112]	gelatin ChEBI	-	hydrolysis
[Ref.: #68371]	gentiobiose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23112]	glucose ChEBI	+	fermentation
[Ref.: #68371]	glycerol ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23112]	hippurate ChEBI	-	hydrolysis
[Ref.: #116979]	hippurate ChEBI	-	hydrolysis
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23112]	L-arabinose ChEBI	-	builds acid from
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23112]	lactose ChEBI	+	builds acid from
[Ref.: #68371]	lactose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23112]	maltose ChEBI	+	builds acid from
[Ref.: #68371]	maltose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23112]	mannitol ChEBI	-	builds acid from
[Ref.: #23112]	mannitol ChEBI	-	fermentation
[Ref.: #23112]	melezitose ChEBI	+	builds acid from
[Ref.: #23112]	melezitose ChEBI	+	fermentation
[Ref.: #68371]	melezitose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23112]	melibiose ChEBI	+	builds acid from
[Ref.: #68371]	melibiose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23112]	methyl beta-D-glucopyranoside ChEBI	+	builds acid from
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23112]	methyl D-glucoside ChEBI	-	fermentation
[Ref.: #68371]	myo-inositol ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23112]	nitrate ChEBI	+	reduction
[Ref.: #116979]	nitrate ChEBI	+	reduction
[Ref.: #116979]	nitrate ChEBI	+	respiration
[Ref.: #116979]	nitrite ChEBI	-	reduction
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23112]	pullulan ChEBI	-	builds acid from
[Ref.: #23112]	raffinose ChEBI	+	builds acid from
[Ref.: #68371]	raffinose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23112]	ribose ChEBI	+	builds acid from
[Ref.: #68371]	salicin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23112]	sorbitol ChEBI	-	builds acid from
[Ref.: #23112]	sucrose ChEBI	+	builds acid from
[Ref.: #23112]	sucrose ChEBI	+	fermentation
[Ref.: #68371]	sucrose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23112]	tagatose ChEBI	-	builds acid from
[Ref.: #23112]	tagatose ChEBI	+/-	builds acid from
[Ref.: #23112]	trehalose ChEBI	+	builds acid from
[Ref.: #68371]	trehalose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	turanose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #116979]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #116979]		acetoin ChEBI	-
[Ref.: #116979]		glucose ChEBI		+

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #116979]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #23112]	alkaline phosphatase	+/-	3.1.3.1
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #23112]	alpha-fucosidase	-	3.2.1.51
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #23112]	alpha-galactosidase	+	3.2.1.22
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #23112]	alpha-glucosidase	+/-	3.2.1.20
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #23112]	alpha-mannosidase	-	3.2.1.24
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #116979]	amylase	+
[Ref.: #23112]	arginine dihydrolase	-	3.5.3.6
[Ref.: #23112]	beta-galactosidase	+	3.2.1.23
[Ref.: #116979]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #23112]	beta-glucosidase	+	3.2.1.21
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #23112]	beta-glucuronidase	-	3.2.1.31
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #23112]	beta-mannosidase	-	3.2.1.25
[Ref.: #116979]	caseinase	-	3.4.21.50
[Ref.: #116979]	catalase	+	1.11.1.6
[Ref.: #23112]	chymotrypsin	-	3.4.4.5
[Ref.: #23112]	cystine arylamidase	-	3.4.11.3
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #116979]	DNase	-
[Ref.: #23112]	esterase (C 4)	-
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #23112]	esterase lipase (C 8)	-
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #116979]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #116979]	gelatinase	-
[Ref.: #23112]	glycyl tryptophan arylamidase	-
[Ref.: #116979]	lecithinase	-
[Ref.: #23112]	leucine arylamidase	+	3.4.11.1
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #116979]	lipase	-
[Ref.: #23112]	lipase (C 14)	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #116979]	lysine decarboxylase	-	4.1.1.18
[Ref.: #23112]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #116979]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #116979]	oxidase	-
[Ref.: #116979]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #116979]	protease	-
[Ref.: #23112]	pyrazinamidase	+	3.5.1.B15
[Ref.: #23112]	pyrazinamidase	+/-	3.5.1.B15
[Ref.: #23112]	pyroglutamic acid arylamidase	-
[Ref.: #23112]	trypsin	-	3.4.21.4
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #116979]	tryptophan deaminase	-
[Ref.: #116979]	tween esterase	-
[Ref.: #23112]	urease	-	3.5.1.5
[Ref.: #116979]	urease	-	3.5.1.5
[Ref.: #23112]	valine arylamidase	-
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #116979]	10685	not determinedn.d.	+	-	-	-	+	-	-	+/-	-	+	+	+	+	-	-	-	+	-	-	-	+/-	-	-	+	+	+	+/-	+	+	+	+	+	-	+	+	+/-	+/-	-	+	+	-	-	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #116979]	9696	-	-	-	-	-	+	+	-	-	-	+	+	+	+	-	+	+	-	-	-

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	teichoic acid biosynthesis	100	1 of 1
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	denitrification	100	2 of 2
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	vitamin K metabolism	100	5 of 5
[Ref.: #66794]	palmitate biosynthesis	95.45	21 of 22
[Ref.: #66794]	starch degradation	90	9 of 10
[Ref.: #66794]	myo-inositol biosynthesis	90	9 of 10
[Ref.: #66794]	valine metabolism	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	peptidoglycan biosynthesis	86.67	13 of 15
[Ref.: #66794]	glycolate and glyoxylate degradation	83.33	5 of 6
[Ref.: #66794]	pentose phosphate pathway	81.82	9 of 11
[Ref.: #66794]	proline metabolism	81.82	9 of 11
[Ref.: #66794]	glycogen metabolism	80	4 of 5
[Ref.: #66794]	metabolism of amino sugars and derivatives	80	4 of 5
[Ref.: #66794]	threonine metabolism	80	8 of 10
[Ref.: #66794]	photosynthesis	78.57	11 of 14
[Ref.: #66794]	d-mannose degradation	77.78	7 of 9
[Ref.: #66794]	serine metabolism	77.78	7 of 9
[Ref.: #66794]	molybdenum cofactor biosynthesis	77.78	7 of 9
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	C4 and CAM-carbon fixation	75	6 of 8
[Ref.: #66794]	sulfopterin metabolism	75	3 of 4
[Ref.: #66794]	purine metabolism	72.34	68 of 94
[Ref.: #66794]	NAD metabolism	72.22	13 of 18
[Ref.: #66794]	tetrahydrofolate metabolism	71.43	10 of 14
[Ref.: #66794]	glycolysis	70.59	12 of 17
[Ref.: #66794]	phenylalanine metabolism	69.23	9 of 13
[Ref.: #66794]	pyrimidine metabolism	68.89	31 of 45
[Ref.: #66794]	cyanate degradation	66.67	2 of 3
[Ref.: #66794]	aspartate and asparagine metabolism	66.67	6 of 9
[Ref.: #66794]	L-lactaldehyde degradation	66.67	2 of 3
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	metabolism of disaccharids	63.64	7 of 11
[Ref.: #66794]	non-pathway related	63.16	24 of 38
[Ref.: #66794]	isoleucine metabolism	62.5	5 of 8
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	gluconeogenesis	62.5	5 of 8
[Ref.: #66794]	ketogluconate metabolism	62.5	5 of 8
[Ref.: #66794]	vitamin B1 metabolism	61.54	8 of 13
[Ref.: #66794]	glutamate and glutamine metabolism	60.71	17 of 28
[Ref.: #66794]	glycine betaine biosynthesis	60	3 of 5
[Ref.: #66794]	methylglyoxal degradation	60	3 of 5
[Ref.: #66794]	isoprenoid biosynthesis	57.69	15 of 26
[Ref.: #66794]	oxidative phosphorylation	57.14	52 of 91
[Ref.: #66794]	mevalonate metabolism	57.14	4 of 7
[Ref.: #66794]	heme metabolism	57.14	8 of 14
[Ref.: #66794]	citric acid cycle	57.14	8 of 14
[Ref.: #66794]	ubiquinone biosynthesis	57.14	4 of 7
[Ref.: #66794]	CO2 fixation in Crenarchaeota	55.56	5 of 9
[Ref.: #66794]	histidine metabolism	55.17	16 of 29
[Ref.: #66794]	methionine metabolism	53.85	14 of 26
[Ref.: #66794]	leucine metabolism	53.85	7 of 13
[Ref.: #66794]	degradation of pentoses	53.57	15 of 28
[Ref.: #66794]	flavin biosynthesis	53.33	8 of 15
[Ref.: #66794]	lysine metabolism	52.38	22 of 42
[Ref.: #66794]	alanine metabolism	51.72	15 of 29
[Ref.: #66794]	pantothenate biosynthesis	50	3 of 6
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	Entner Doudoroff pathway	50	5 of 10
[Ref.: #66794]	mannosylglycerate biosynthesis	50	1 of 2
[Ref.: #66794]	dTDPLrhamnose biosynthesis	50	4 of 8
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	cis-vaccenate biosynthesis	50	1 of 2
[Ref.: #66794]	cysteine metabolism	50	9 of 18
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	adipate degradation	50	1 of 2
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	46.15	6 of 13
[Ref.: #66794]	arginine metabolism	45.83	11 of 24
[Ref.: #66794]	vitamin B6 metabolism	45.45	5 of 11
[Ref.: #66794]	d-xylose degradation	45.45	5 of 11
[Ref.: #66794]	tryptophan metabolism	44.74	17 of 38
[Ref.: #66794]	lipid A biosynthesis	44.44	4 of 9
[Ref.: #66794]	reductive acetyl coenzyme A pathway	42.86	3 of 7
[Ref.: #66794]	cardiolipin biosynthesis	42.86	3 of 7
[Ref.: #66794]	propanol degradation	42.86	3 of 7
[Ref.: #66794]	glutathione metabolism	42.86	6 of 14
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
[Ref.: #66794]	bacilysin biosynthesis	40	2 of 5
[Ref.: #66794]	lipoate biosynthesis	40	2 of 5
[Ref.: #66794]	coenzyme M biosynthesis	40	4 of 10
[Ref.: #66794]	propionate fermentation	40	4 of 10
[Ref.: #66794]	D-cycloserine biosynthesis	40	2 of 5
[Ref.: #66794]	lipid metabolism	38.71	12 of 31
[Ref.: #66794]	urea cycle	38.46	5 of 13
[Ref.: #66794]	tyrosine metabolism	35.71	5 of 14
[Ref.: #66794]	enterobactin biosynthesis	33.33	1 of 3
[Ref.: #66794]	selenocysteine biosynthesis	33.33	2 of 6
[Ref.: #66794]	octane oxidation	33.33	1 of 3
[Ref.: #66794]	sulfoquinovose degradation	33.33	1 of 3
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	allantoin degradation	33.33	3 of 9
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	ascorbate metabolism	31.82	7 of 22
[Ref.: #66794]	degradation of sugar alcohols	31.25	5 of 16
[Ref.: #66794]	4-hydroxyphenylacetate degradation	30	3 of 10
[Ref.: #66794]	degradation of hexoses	27.78	5 of 18
[Ref.: #66794]	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	androgen and estrogen metabolism	25	4 of 16
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	biotin biosynthesis	25	1 of 4
[Ref.: #66794]	alginate biosynthesis	25	1 of 4
[Ref.: #66794]	CMP-KDO biosynthesis	25	1 of 4
[Ref.: #66794]	degradation of sugar acids	24	6 of 25
[Ref.: #66794]	sulfate reduction	23.08	3 of 13
[Ref.: #66794]	nitrate assimilation	22.22	2 of 9
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5820]	Sample type/isolated from	dog, abscess under the mandible
[Ref.: #5820]	Country	United Kingdom
[Ref.: #5820]	Country ISO 3 Code	GBR
[Ref.: #5820]	Continent	Europe

[Ref.: #53660]	Sample type/isolated from	Dog,abscess under the mandible
[Ref.: #53660]	Sampling date	1996
[Ref.: #53660]	Country	United Kingdom
[Ref.: #53660]	Country ISO 3 Code	GBR
[Ref.: #53660]	Continent	Europe

[Ref.: #116979]	Sample type/isolated from	Animal, Dog, abscess under the mandible
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Canidae (Dog)
#Host Body-Site	#Other	#Abscess

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5820]	Pathogenicity (animal)	yes
[Ref.: #5820]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #116979]	Biosafety level	2	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5820]	Actinomyces bowdenii 16S rRNA gene, strain M1956/95/1	AJ234039	1513	ENA	131109 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Actinomyces bowdenii DSM 15435	GCA_017592395	scaffold	GenBank	131109 tax ID	*
[Ref.: #66792]	Actinomyces bowdenii strain DSM 15435	131109.7	wgs	PATRIC	131109 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Actinomyces bowdenii DSM 15435 NCBI: GCA_017592395.1
[Ref.: #69481]	spore-forming	no	91	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Actinomyces bowdenii DSM 15435 NCBI: GCA_017592395.1
[Ref.: #69480]	flagellated	no	97.153	yes
[Ref.: #69480]	gram-positive	yes	94.963	yes
[Ref.: #69480]	anaerobic	no	94.567	yes
[Ref.: #69480]	aerobic	no	92.508	yes
[Ref.: #69480]	halophile	no	84.692	no
[Ref.: #69480]	spore-forming	no	93.41	no
[Ref.: #69480]	thermophile	no	96.553	yes
[Ref.: #69480]	glucose-util	yes	86.663	no
[Ref.: #69480]	motile	no	90.887	yes
[Ref.: #69480]	glucose-ferment	yes	70.945	no

Availability in culture collections External links

[Ref.: #5820]

Culture collection no.

DSM 15435, CCUG 37421, CIP 106647

[Ref.: #69859]

SI-ID 13433

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actinomyces capricornis sp. nov., isolated from the oral cavity of a Japanese serow.	Saito M, Shinozaki-Kuwahara N, Hashizume-Takizawa T, Gotouda H, Senpuku H, Kurita-Ochiai T	Microbiol Immunol	10.1111/1348-0421.12941	2021	*
Phylogeny	Characterization of isolates of members of the genus Actinomyces from Marmota himalayana: description of Actinomyces faecalis sp. nov., Actinomyces respiraculi sp. nov., and Actinomyces trachealis sp. nov.	Zhou J, Zhang S, Zhang G, Yang J, Lai XH, Pu J, Jin D, Lu S, Huang Y, Zhu W, Huang Y, Xu M, Lei W, Cheng Y, Liu L, Xu J	Int J Syst Evol Microbiol	10.1099/ijsem.0.004875	2021	*
Phylogeny	Actinomyces bowdenii sp. nov., isolated from canine and feline clinical specimens.	Pascual C, Foster G, Falsen E, Bergstrom K, Greko C, Collins MD	Int J Syst Bacteriol	10.1099/00207713-49-4-1873	1999	*

References

#5820

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15435

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23112

Cristina Pascual, Geoffrey Foster, Enevold Falsen, Karin Bergström, Christina Greko, Matthew D. Collins: Actinomyces bowdenii sp. nov., isolated from canine and feline clinical specimens. IJSEM 49: 1873 - 1877 1999 ( DOI 10.1099/00207713-49-4-1873 , PubMed 10555371 )

#35971 ; Curators of the CIP;
#53660 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 37421

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#69859

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID13433.1 )

#116979 Collection of Institut Pasteur ; Curators of the CIP; CIP 106647
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Actinomyces bowdenii in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Actinomyces bowdenii DSM 15435

Actinomyces bowdenii DSM 15435

Change proposal

Change proposal