Name: Anaerofilum agile F
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17677

Type strain:

Species: Anaerofilum agile

Strain Designation: F

Culture col. no.: DSM 4272

Strain history: <- G. Zellner, strain F

NCBI tax ID(s): 52786 (species)

SI-ID 47823

DSM 4272

Section

Anaerofilum agile F is an anaerobe, mesophilic bacterium that was isolated from sewage sludge.

anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Oscillospiraceae*
	Genus	*Anaerofilum*
	Species	**Anaerofilum agile**
	Full Scientific Name (LPSN)	Anaerofilum agile Zellner et al. 1996

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1638]

Culture medium

ANAEROFILUM MEDIUM (DSMZ Medium 719)

[Ref.: #1638]

Culture medium growth

[Ref.: #1638]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1638]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1638]			growth	37 °C

[Ref.: #1638]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #1638]

Oxygen tolerance

anaerobe

[Ref.: #1638]	Murein short key	A12.04
[Ref.: #1638]	Murein types	A3alpha' L-Lys-L-Ser

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1638]	Sample type/isolated from	sewage sludge
[Ref.: #1638]	Country	Germany
[Ref.: #1638]	Country ISO 3 Code	DEU
[Ref.: #1638]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered

#Waste

#Sewage sludge

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence X98011 (>99% sequence identity) for Anaerofilum from Microbeatlas

Aquatic Samples	4
Soil Samples
Animal Samples	6
Plant Samples
Total Samples	10

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1638]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #1638]	A.agile 16S rRNA gene	X98011	1468	ENA	52786 tax ID

[Ref.: #1638]

GC-content

54.5 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #1638]

Culture collection no.

DSM 4272

[Ref.: #86668]

SI-ID 47823

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Anaerofilum pentosovorans gen. nov., sp. nov., and Anaerofilum agile sp. nov., two new, strictly anaerobic, mesophilic, acidogenic bacteria from anaerobic bioreactors.	Zellner G, Stackebrandt E, Nagel D, Messner P, Weiss N, Winter J	Int J Syst Bacteriol	10.1099/00207713-46-4-871	1996	*

References

#1638

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4272

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#86668

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID47823.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Anaerofilum agile in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF