Name: Thermomonas brevis R-13291
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17575

Type strain:

Species: Thermomonas brevis

Strain Designation: R-13291

Culture col. no.: DSM 15422, LMG 21746

Strain history: <- D. Janssens, LMG <- J. Mergaert; R-13291 <- M. Cnockaert, Univ. Ghent, Belgium <- M. Cnockaert, Univ. Ghent, Belgium

NCBI tax ID(s): 1440764 (strain), 215691 (species)

SI-ID 26655

LMG 21746, DSM 15422, BCRC 17538, CCRC 17538

Section

Thermomonas brevis R-13291 is a mesophilic bacterium that was isolated from biofilm pn PCL pellets used as solid carbon source in a denitrification reactor.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Lysobacterales*
	Family	*Lysobacteraceae*
	Genus	*Thermomonas*
	Species	**Thermomonas brevis**
	Full Scientific Name (LPSN)	Thermomonas brevis Mergaert et al. 2003

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5794]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #5794]

Culture medium growth

[Ref.: #5794]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5794]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5794]			growth	30 °C

[Ref.: #5794]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5794]	Sample type/isolated from	biofilm pn PCL pellets used as solid carbon source in a denitrification reactor
[Ref.: #5794]	Geographic location (country and/or sea, region)	Stuttgart
[Ref.: #5794]	Country	Germany
[Ref.: #5794]	Country ISO 3 Code	DEU
[Ref.: #5794]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered	#Bioreactor	-
#Environmental	#Biofilm	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ519989 (>99% sequence identity) for Thermomonas brevis from Microbeatlas

Aquatic Samples	222
Soil Samples	223
Animal Samples	126
Plant Samples	57
Total Samples	628

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5794]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Thermomonas brevis 16S rRNA gene, type strain LMG 21746T	AJ519989	1497	ENA	215691 tax ID	*

Availability in culture collections External links

[Ref.: #5794]

Culture collection no.

DSM 15422, LMG 21746

[Ref.: #86571]

SI-ID 26655

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thermomonas carbonis sp. nov., isolated from the soil of a coal mine.	Wang L, Zheng S, Wang D, Wang L, Wang G	Int J Syst Evol Microbiol	10.1099/ijs.0.063800-0	2014	*
Phylogeny	Thermomonas koreensis sp. nov., a mesophilic bacterium isolated from a ginseng field.	Kim MK, Im WT, In JG, Kim SH, Yang DC	Int J Syst Evol Microbiol	10.1099/ijs.0.64049-0	2006	*
Phylogeny	Thermomonas fusca sp. nov. and Thermomonas brevis sp. nov., two mesophilic species isolated from a denitrification reactor with poly(epsilon-caprolactone) plastic granules as fixed bed, and emended description of the genus Thermomonas.	Mergaert J, Cnockaert MC, Swings J	Int J Syst Evol Microbiol	10.1099/ijs.0.02684-0	2003	*

References

#5794

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15422

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#86571

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID26655.1 )

* These data were automatically processed and therefore are not curated

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