Name: Stenotrophomonas nitritireducens L2
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 17555

Type strain:

Species: Stenotrophomonas nitritireducens

Strain Designation: L2

Culture col. no.: CCUG 46888, CIP 107228, LMG 22074, DSM 12575, ATCC BAA-12, JCM 13311

Strain history: CIP <- 2001, A. Lipski, Osnabrück Univ., Osnabrück, Germany: strain L2

NCBI tax ID(s): 83617 (species)

SI-ID 44253

ATCC BAA-12, DSM 12575, CCUG 46888, CIP 107228, LMG 22074, JCM 13311, KCTC 12168, KACC 10891, BCRC 17535, CCRC 17535, VTT E-032352

Special Collections

Other strains from Stenotrophomonas nitritireducens

Section

When using BacDive for research please cite our paper

Stenotrophomonas nitritireducens L2 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from laboratory scale biofilter.

Gram-negative
motile
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Lysobacterales*
	Family	*Lysobacteraceae*
	Genus	*Stenotrophomonas*
	Species	**Stenotrophomonas nitritireducens**
	Full Scientific Name (LPSN)	Stenotrophomonas nitritireducens Finkmann et al. 2000

Information on morphological and physiological properties Morphology

[Ref.: #121310]	Gram stain	negative
[Ref.: #125438]	Gram stain	negative Confidence in %98.23
[Ref.: #125439]	Gram stain	negative Confidence in %94.2

[Ref.: #121310]	Cell shape	rod-shaped

[Ref.: #121310]	Motility	yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4680]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #4680]

Culture medium growth

[Ref.: #4680]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4680]

Culture medium composition

expand / minimize

[Ref.: #33707]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #33707]

Culture medium growth

[Ref.: #33707]

Culture medium composition

expand / minimize

[Ref.: #121310]

Culture medium

CIP Medium 72

[Ref.: #121310]

Culture medium growth

[Ref.: #121310]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #4680]		growth	30 °C
[Ref.: #33707]		growth	30 °C
[Ref.: #57385]		growth	30 °C
[Ref.: #67770]		growth	30 °C
[Ref.: #121310]		growth	25-37 °C
[Ref.: #121310]	no	growth	5 °C
[Ref.: #121310]	no	growth	10 °C
[Ref.: #121310]	no	growth	41 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #57385]	Oxygen tolerance	aerobe
[Ref.: #121310]	Oxygen tolerance	obligate aerobe
[Ref.: #125439]	Oxygen tolerance	obligate aerobe Confidence in %98.6

[Ref.: #125438]	Ability of spore formation	no Confidence in %91.204
[Ref.: #125439]	Ability of spore formation	no Confidence in %96.7

	Salt	Tested relation		Salt conc.
[Ref.: #121310]	NaCl		growth	0-4	%
[Ref.: #121310]	NaCl	no	growth	6	%
[Ref.: #121310]	NaCl	no	growth	8	%
[Ref.: #121310]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	adipate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #121310]	citrate ChEBI	-	carbon source
[Ref.: #68369]	D-glucose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68369]	D-mannitol ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-mannose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	decanoate ChEBI	-	assimilation	* from API 20NE
[Ref.: #121310]	esculin ChEBI	+	hydrolysis
[Ref.: #68369]	esculin ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gluconate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	malate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	maltose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	N-acetylglucosamine ChEBI	+	assimilation	* from API 20NE
[Ref.: #121310]	nitrate ChEBI	-	reduction
[Ref.: #121310]	nitrate ChEBI	-	respiration
[Ref.: #68369]	nitrate ChEBI	-	reduction	* from API 20NE
[Ref.: #121310]	nitrite ChEBI	+	reduction
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68369]	urea ChEBI	-	hydrolysis	* from API 20NE
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #121310]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	no	yes

	Metabolite production	Metabolite	Production
[Ref.: #121310]		indole ChEBI	no
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Indole test
[Ref.: #68369]		indole ChEBI	-	* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #121310]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #121310]	amylase	-
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #121310]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68369]	beta-glucosidase	+	3.2.1.21	* from API 20NE
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #121310]	caseinase	-	3.4.21.50
[Ref.: #121310]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68369]	cytochrome oxidase	+	1.9.3.1	* from API 20NE
[Ref.: #121310]	DNase	-
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #121310]	gelatinase	+/-
[Ref.: #68369]	gelatinase	-		* from API 20NE
[Ref.: #121310]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #121310]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #121310]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #121310]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #121310]	oxidase	+
[Ref.: #121310]	protease	-
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #121310]	tryptophan deaminase	-
[Ref.: #121310]	tween esterase	+
[Ref.: #121310]	urease	+	3.5.1.5
[Ref.: #68369]	urease	-	3.5.1.5	* from API 20NE
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #57385]

Fatty acid	Percentage	ECL
C15:0 ISO	35.9	14.621
C11:0 iso	10.2	10.605
C14:0 ISO	9.4	13.618
C17:1 ω9c ISO	7.5	16.416
C15:1 ISO F	5.9	14.414
C15:0 ANTEISO	4.7	14.711
C11:0 ISO 3OH	4	12.09
C16:0 iso	3.3	15.626
C13:0 ISO 3OH	3.3	14.11
C12:0 ISO 3OH	2.9	13.098
C13:0 iso	1.9	12.612
C16:0	1.9	16
C14:0	1.8	14
C15:0	1.5	15
C12:0 3OH	1.2	13.455
C16:1 ω7c	1.1	15.819
C17:0 CYCLO	1.1	16.888
C16:1 ω9c	0.8	15.774
C17:0 iso	0.6	16.629
C13:0 2OH	0.5	14.191
C11:0 ANTEISO	0.4	10.693

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #4680]	28168	-	-	-	-	-	+	-	-	-	-	-	-	+	-	-	-	-	-	+	-	+

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #121310]	2082	not determinedn.d.	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	+	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	+	-	+	-	+	+	+	+	+	-	+	+	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #121310]	10176	-	+	-	+	-	+	-	-	+	-	+	+	-	-	-	-	-	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4680]	Sample type/isolated from	laboratory scale biofilter
[Ref.: #4680]	Geographic location (country and/or sea, region)	Osnabrück
[Ref.: #4680]	Country	Germany
[Ref.: #4680]	Country ISO 3 Code	DEU
[Ref.: #4680]	Continent	Europe

[Ref.: #57385]	Sample type/isolated from	Biofilter,laboratory scale
[Ref.: #57385]	Sampling date	1992
[Ref.: #57385]	Geographic location (country and/or sea, region)	Osnabrück
[Ref.: #57385]	Country	Germany
[Ref.: #57385]	Country ISO 3 Code	DEU
[Ref.: #57385]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Experimental biofilter supplied with the waste gas of an animal-rendering plant

[Ref.: #121310]	Sample type/isolated from	Laboratory scale biofilter
[Ref.: #121310]	Geographic location (country and/or sea, region)	Osnabrück
[Ref.: #121310]	Country	Germany
[Ref.: #121310]	Country ISO 3 Code	DEU
[Ref.: #121310]	Continent	Europe
[Ref.: #121310]	Isolation date	1992
* marker position based on {}

Isolation sources categories

#Engineered	#Bioremediation	#Biofilter
#Engineered	#Laboratory	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ012229 (>99% sequence identity) for Stenotrophomonas from Microbeatlas

Aquatic Samples	1046
Soil Samples	667
Animal Samples	1355
Plant Samples	293
Total Samples	3361

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #4680]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #121310]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Stenotrophomonas nitritireducens 16S rRNA gene, strain L2	AJ012229	1513	GenBank ENA	83617 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Stenotrophomonas nitritireducens DSM 12575	GCA_001431425	contig	GenBank ENA	83617 tax ID
[Ref.: #66792]	Stenotrophomonas nitritireducens strain DSM 12575	83617.3	wgs	PATRIC	83617 tax ID	*
[Ref.: #66792]	Stenotrophomonas nitritireducens DSM 12575	2713896755	draft	JGI IMG/M	83617 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Model	Trait	Prediction	Confidence in %	In training data
	Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Stenotrophomonas nitritireducens strain DSM 12575 PATRIC: 83617.3
[Ref.: #125438]	gram-positive	gram-positiveⓘ	no	98.23	no
[Ref.: #125438]	anaerobic	anaerobicⓘ	no	95.851	yes
[Ref.: #125438]	aerobic	aerobicⓘ	yes	82.736	yes
[Ref.: #125438]	spore-forming	spore-formingⓘ	no	91.204	no
[Ref.: #125438]	thermophile	thermophilicⓘ	no	95.657	yes
[Ref.: #125438]	motile2+	flagellatedⓘ	yes	61.493	no

	Model	Trait	Prediction	Confidence in %
	Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Stenotrophomonas nitritireducens DSM 12575 NCBI: GCA_001431425
[Ref.: #125439]	BacteriaNet	spore_formationⓘ	no	96.7
[Ref.: #125439]	BacteriaNet	motilityⓘ	yes	81.6
[Ref.: #125439]	BacteriaNet	gram_stainⓘ	negative	94.2
[Ref.: #125439]	BacteriaNet	oxygen_toleranceⓘ	obligate aerobe	98.6

Availability in culture collections External links

[Ref.: #4680]

Culture collection no.

CCUG 46888, CIP 107228, LMG 22074, DSM 12575, ATCC BAA-12, JCM 13311

[Ref.: #86550]

SI-ID 44253

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Stenotrophomonas acidaminiphila sp. nov., a strictly aerobic bacterium isolated from an upflow anaerobic sludge blanket (UASB) reactor.	Assih EA, Ouattara AS, Thierry S, Cayol JL, Labat M, Macarie H	Int J Syst Evol Microbiol	10.1099/00207713-52-2-559	2002	*
Phylogeny	Stenotrophomonas ginsengisoli sp. nov., isolated from a ginseng field.	Kim HB, Srinivasan S, Sathiyaraj G, Quan LH, Kim SH, Bui TPN, Liang ZQ, Kim YJ, Yang DC	Int J Syst Evol Microbiol	10.1099/ijs.0.014662-0	2009	*
Phylogeny	Characterization of N2O-producing Xanthomonas-like isolates from biofilters as Stenotrophomonas nitritireducens sp. nov., Luteimonas mephitis gen. nov., sp. nov. and Pseudoxanthomonas broegbernensis gen. nov., sp. nov.	Finkmann W, Altendorf K, Stackebrandt E, Lipski A	Int J Syst Evol Microbiol	10.1099/00207713-50-1-273	2000	*

References

#4680

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 12575

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#33707 ; Curators of the CIP;
#57385 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 46888

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68369

Automatically annotated from API 20NE .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#86550

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID44253.1 )

#121310 Collection of Institut Pasteur ; Curators of the CIP; CIP 107228

#125438

Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )

#125439

Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

* These data were automatically processed and therefore are not curated

Change proposal

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Stenotrophomonas nitritireducens strain DSM 12575

Stenotrophomonas nitritireducens DSM 12575

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Change proposal