Helicovermis profundi (DSM 112048, JCM 39167, S502)

Name: Helicovermis profundi (DSM 112048, JCM 39167, S502)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 175488

Type strain

Strain Designation S502

Culture col. no. DSM 112048 JCM 39167 S502

NCBI tax ID(s) 3065157

History <- U. Miyazaki, Kyoto University, Kyoto, Japan; S502

Links

Helicovermis profundi S502 is a bacterium that was isolated from chimney in hydrothermal field.

Bacteria

Name and taxonomic classification

SI-ID 281842

DSM 112048,JCM 39167

@ref 20215

Last LPSN update 2026-02-09 11:42:19

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order [Clostridia, not assigned to order]

Family [Clostridia, not assigned to family]

Genus Helicovermis

Species Helicovermis profundi

Full scientific name Helicovermis profundi Miyazaki et al. 2024

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
125373	FUSIBACTER MEDIUM (DSMZ Medium 853)		Medium recipe at MediaDive	Name: FUSIBACTER MEDIUM (DSMZ Medium 853) Composition: D-Glucose 3.56436 g/l Na2S2O3 x 5 H2O 3.12871 g/l MgCl2 x 6 H2O 2.9703 g/l Na2CO3 1.48515 g/l Yeast extract 0.990099 g/l NH4Cl 0.990099 g/l KCl 0.990099 g/l Trypticase peptone 0.990099 g/l Na-acetate x 3 H2O 0.49505 g/l L-Cysteine HCl x H2O 0.49505 g/l KH2PO4 0.29703 g/l K2HPO4 0.29703 g/l Na2S x 9 H2O 0.29703 g/l MgSO4 x 7 H2O 0.029703 g/l Nitrilotriacetic acid 0.0148515 g/l NaCl 0.00990099 g/l MnSO4 x H2O 0.00495049 g/l CoSO4 x 7 H2O 0.00178218 g/l ZnSO4 x 7 H2O 0.00178218 g/l CaCl2 x 2 H2O 0.000990099 g/l FeSO4 x 7 H2O 0.000990099 g/l Sodium resazurin 0.00049505 g/l NiCl2 x 6 H2O 0.00029703 g/l AlK(SO4)2 x 12 H2O 0.00019802 g/l CuSO4 x 5 H2O 9.90099e-05 g/l Na2MoO4 x 2 H2O 9.90099e-05 g/l H3BO3 9.90099e-05 g/l Na2WO4 x 2 H2O 3.9604e-06 g/l Na2SeO3 x 5 H2O 2.9703e-06 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
125373	positive	growth	20

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
125373	chimney in hydrothermal field	Suiyo Seamount	Japan	JPN	Asia	28.5716	140.647 28.5716/140.647

Interaction and safety

Sequence information

Genome-based predictions

Literature

Title	Authors	Journal	DOI	Year
Validation List no. 217. Valid publication of new names and new combinations effectively published outside the IJSEM.	Oren A, Goker M.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006275	2024
Helicovermis profundi gen. nov., sp. nov., a novel mesophilic, asporogenous bacterium within the Clostridia isolated from a deep-sea hydrothermal vent chimney.	Miyazaki U, Mizutani D, Hashimoto Y, Tame A, Sawayama S, Miyazaki J, Takai K, Nakagawa S.	Antonie Van Leeuwenhoek	10.1007/s10482-023-01919-9	2024

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#125373	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 112048
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Helicovermis profundi (DSM 112048, JCM 39167, S502)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome-based predictions

Literature

Literature

References

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