Lysobacter gummosus (DSM 6980, ATCC 29489, NCIB 11896)

Name: Lysobacter gummosus (DSM 6980, ATCC 29489, NCIB 11896)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 17481

Type strain

Culture col. no. DSM 6980 ATCC 29489 NCIB 11896 CCUG 55586 LMG 8763 1 more

NCBI tax ID(s) 262324

Special Collections DSMZ CCUG Literature strains

Links

Lysobacter gummosus DSM 6980 is an aerobe, mesophilic prokaryote that produces polysaccharides and was isolated from soil.

polysaccharide production aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 3552

LMG 8763,ATCC 29489,CECT 909,DSM 6980,NCIB 11896,NCIMB 11896,KCTC 12132,BCRC 17537,CCRC 17537,CCUG 55586

@ref 20215

Last LPSN update 2025-12-16 09:51:06

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Lysobacterales

Family Lysobacteraceae

Genus Lysobacter

Species Lysobacter gummosus

Full scientific name Lysobacter gummosus Christensen and Cook 1978 (Approved Lists 1980)

BacDive ID	Other strains from **Lysobacter gummosus** (1)	Type strain
17477	L. gummosus Myxobacter AL-1, CCUG 17936, DSM 1895, ATCC ...

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
2935	CY-AGAR (DSMZ Medium 67)	Medium recipe at MediaDive	Name: CY-AGAR (DSMZ Medium 67) Composition: Agar 15.0 g/l Casitone 3.0 g/l CaCl2 x 2 H2O 1.36 g/l Yeast extract 1.0 g/l Distilled water
2935	REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a)	Medium recipe at MediaDive	Name: REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
2935	R2A MEDIUM (DSMZ Medium 830)	Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
2935	positive	growth	28	mesophilic
2935	positive	growth	30	mesophilic
60654	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

60654

Oxygen toleranceaerobe

Compound production

2935

Compoundpolysaccharides

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
43356	2509 ChEBI	agar	-	degradation
43356	58187 ChEBI	alginate	-	degradation
43356	28938 ChEBI	ammonium	+	nitrogen source
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
43356	22653 ChEBI	asparagine	+	nitrogen source
43356	85146 ChEBI	carboxymethylcellulose	+	degradation
43356	62968 ChEBI	cellulose	-	degradation
43356	17029 ChEBI	chitin	+	degradation
43356	16947 ChEBI	citrate	+	assimilation
68369	17634 ChEBI	D-glucose	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	+	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
68369	4853 ChEBI	esculin	+	hydrolysis	from API 20NE
43356	5291 ChEBI	gelatin	+	degradation
68369	5291 ChEBI	gelatin	+	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
43356	17234 ChEBI	glucose	-	fermentation
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	+	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
43356	68837 ChEBI	pectate	+	degradation
43356	28017 ChEBI	starch	-	degradation
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
43356	53424 ChEBI	tween 20	+	degradation
43356	53426 ChEBI	tween 80	+	degradation
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite
43356	15688 ChEBI	acetoin
43356	35581 ChEBI	indole
68369	35581 ChEBI	indole	from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test	Voges-proskauer-test	Methylred-test
43356	15688 ChEBI	acetoin		-
43356	17234 ChEBI	glucose			-
68369	35581 ChEBI	indole	-			from API 20NE

Enzymes

@ref	Value	Activity	Ec
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68369	beta-glucosidase	+	3.2.1.21	from API 20NE
43356	catalase	+	1.11.1.6
43356	cytochrome oxidase	+	1.9.3.1
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68369	gelatinase	+		from API 20NE
68369	urease	-	3.5.1.5	from API 20NE

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	biotin biosynthesis	100	4 of 4
66794	aminopropanol phosphate biosynthesis	100	2 of 2
66794	valine metabolism	100	9 of 9
66794	Entner Doudoroff pathway	100	10 of 10
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	aspartate and asparagine metabolism	100	9 of 9
66794	enterobactin biosynthesis	100	3 of 3
66794	palmitate biosynthesis	100	22 of 22
66794	ppGpp biosynthesis	100	4 of 4
66794	molybdenum cofactor biosynthesis	100	9 of 9
66794	quinate degradation	100	2 of 2
66794	methylglyoxal degradation	100	5 of 5
66794	adipate degradation	100	2 of 2
66794	formaldehyde oxidation	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	sulfopterin metabolism	100	4 of 4
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	coenzyme A metabolism	100	4 of 4
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	suberin monomers biosynthesis	100	2 of 2
66794	folate polyglutamylation	100	1 of 1
66794	cellulose degradation	100	5 of 5
66794	tetrahydrofolate metabolism	92.86	13 of 14
66794	pentose phosphate pathway	90.91	10 of 11
66794	propionate fermentation	90	9 of 10
66794	serine metabolism	88.89	8 of 9
66794	lipid A biosynthesis	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	CO2 fixation in Crenarchaeota	88.89	8 of 9
66794	isoleucine metabolism	87.5	7 of 8
66794	gluconeogenesis	87.5	7 of 8
66794	glutathione metabolism	85.71	12 of 14
66794	reductive acetyl coenzyme A pathway	85.71	6 of 7
66794	heme metabolism	85.71	12 of 14
66794	photosynthesis	85.71	12 of 14
66794	ubiquinone biosynthesis	85.71	6 of 7
66794	phenylalanine metabolism	84.62	11 of 13
66794	leucine metabolism	84.62	11 of 13
66794	purine metabolism	84.04	79 of 94
66794	NAD metabolism	83.33	15 of 18
66794	d-xylose degradation	81.82	9 of 11
66794	3-chlorocatechol degradation	80	4 of 5
66794	threonine metabolism	80	8 of 10
66794	vitamin K metabolism	80	4 of 5
66794	glycine betaine biosynthesis	80	4 of 5
66794	gallate degradation	80	4 of 5
66794	peptidoglycan biosynthesis	80	12 of 15
66794	glycogen metabolism	80	4 of 5
66794	citric acid cycle	78.57	11 of 14
66794	d-mannose degradation	77.78	7 of 9
66794	glycolysis	76.47	13 of 17
66794	tryptophan metabolism	76.32	29 of 38
66794	degradation of sugar alcohols	75	12 of 16
66794	glutamate and glutamine metabolism	75	21 of 28
66794	acetate fermentation	75	3 of 4
66794	CMP-KDO biosynthesis	75	3 of 4
66794	butanoate fermentation	75	3 of 4
66794	glycogen biosynthesis	75	3 of 4
66794	C4 and CAM-carbon fixation	75	6 of 8
66794	pyrimidine metabolism	73.33	33 of 45
66794	flavin biosynthesis	73.33	11 of 15
66794	proline metabolism	72.73	8 of 11
66794	alanine metabolism	72.41	21 of 29
66794	histidine metabolism	72.41	21 of 29
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	propanol degradation	71.43	5 of 7
66794	lipid metabolism	70.97	22 of 31
66794	starch degradation	70	7 of 10
66794	vitamin B1 metabolism	69.23	9 of 13
66794	methionine metabolism	69.23	18 of 26
66794	urea cycle	69.23	9 of 13
66794	cyanate degradation	66.67	2 of 3
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	octane oxidation	66.67	2 of 3
66794	glycolate and glyoxylate degradation	66.67	4 of 6
66794	acetoin degradation	66.67	2 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	66.67	2 of 3
66794	vitamin B6 metabolism	63.64	7 of 11
66794	dTDPLrhamnose biosynthesis	62.5	5 of 8
66794	ketogluconate metabolism	62.5	5 of 8
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	cysteine metabolism	61.11	11 of 18
66794	3-phenylpropionate degradation	60	9 of 15
66794	metabolism of amino sugars and derivatives	60	3 of 5
66794	myo-inositol biosynthesis	60	6 of 10
66794	D-cycloserine biosynthesis	60	3 of 5
66794	lipoate biosynthesis	60	3 of 5
66794	phenol degradation	60	12 of 20
66794	degradation of aromatic, nitrogen containing compounds	58.33	7 of 12
66794	arginine metabolism	58.33	14 of 24
66794	isoprenoid biosynthesis	57.69	15 of 26
66794	degradation of pentoses	57.14	16 of 28
66794	lysine metabolism	57.14	24 of 42
66794	nitrate assimilation	55.56	5 of 9
66794	non-pathway related	55.26	21 of 38
66794	ascorbate metabolism	50	11 of 22
66794	vitamin E metabolism	50	2 of 4
66794	ethanol fermentation	50	1 of 2
66794	toluene degradation	50	2 of 4
66794	tyrosine metabolism	50	7 of 14
66794	glycine metabolism	50	5 of 10
66794	ribulose monophosphate pathway	50	1 of 2
66794	cyclohexanol degradation	50	2 of 4
66794	oxidative phosphorylation	47.25	43 of 91
66794	sulfate reduction	46.15	6 of 13
66794	degradation of hexoses	44.44	8 of 18
66794	vitamin B12 metabolism	44.12	15 of 34
66794	degradation of sugar acids	44	11 of 25
66794	androgen and estrogen metabolism	43.75	7 of 16
66794	benzoyl-CoA degradation	42.86	3 of 7
66794	bile acid biosynthesis, neutral pathway	41.18	7 of 17
66794	arachidonate biosynthesis	40	2 of 5
66794	4-hydroxyphenylacetate degradation	40	4 of 10
66794	creatinine degradation	40	2 of 5
66794	bacilysin biosynthesis	40	2 of 5
66794	ethylmalonyl-CoA pathway	40	2 of 5
66794	polyamine pathway	39.13	9 of 23
66794	phosphatidylethanolamine bioynthesis	38.46	5 of 13
66794	carnitine metabolism	37.5	3 of 8
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	pantothenate biosynthesis	33.33	2 of 6
66794	methane metabolism	33.33	1 of 3
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	sulfoquinovose degradation	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	sphingosine metabolism	33.33	2 of 6
66794	arachidonic acid metabolism	33.33	6 of 18
66794	carotenoid biosynthesis	31.82	7 of 22
66794	phenylpropanoid biosynthesis	30.77	4 of 13
66794	coenzyme M biosynthesis	30	3 of 10
66794	aclacinomycin biosynthesis	28.57	2 of 7
66794	chlorophyll metabolism	27.78	5 of 18
66794	cholesterol biosynthesis	27.27	3 of 11
66794	metabolism of disaccharids	27.27	3 of 11
66794	lactate fermentation	25	1 of 4
66794	alginate biosynthesis	25	1 of 4
66794	catecholamine biosynthesis	25	1 of 4
66794	4-hydroxymandelate degradation	22.22	2 of 9

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
2935	-	-	-	-	-	+	+	+	-	-	+	-	+	-	-	-	-	+	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
2935	soil	Ottawa, Ontario	Canada	CAN	North America
60654	Soil	Ontario,Ottawa	Canada	CAN	North America

Taxonmaps

69479

Global distribution of 16S sequence AB161361 (>99% sequence identity) for Lysobacter from Microbeatlas

Aquatic Samples	1340
Soil Samples	9924
Animal Samples	1424
Plant Samples	3890
Total Samples	16578

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
2935	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4267474v1 assembly for Lysobacter gummosus CCUG 55586	contig	GCA_042674745	262324	39.88
124043	ASM4267970v1 assembly for Lysobacter gummosus CCUG 55586	scaffold	GCA_042679705	262324

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
2935	Lysobacter gummosus gene for 16S rRNA, partial sequence	AB161361	1482		262324
124043	Lysobacter gummosus strain DSM 6980 16S ribosomal RNA gene, partial sequence.	KT851484	1170		262324

GC content

2935

GC-content (mol%)65.7

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Lysobacter gummosus 10.1.1, a Producer of Antimicrobial Agents.	Kudryakova I, Afoshin A, Tarlachkov S, Leontyevskaya E, Suzina N, Leontyevskaya Vasilyeva N.	Microorganisms	10.3390/microorganisms11122853	2023
	Use of a nylon manufacturing waste as an industrial fermentation substrate.	Ramsay BA, Znoj GM, Cooper DG.	Appl Environ Microbiol	10.1128/aem.52.1.152-156.1986	1986
	Metabolites from Lysobacter gummosus YMF3.00690 Against Meloidogyne javanica.	Zhou Z, Wang T, Pu X, Su Y, Shi T, Zhao P, Yang Z, Li G.	Phytopathology	10.1094/phyto-07-23-0261-le	2024
	Whole-Genome Sequencing of Lysobacter capsici VKM B-2533^T and Lysobacter gummosus 10.1.1, Promising Producers of Lytic Agents.	Tarlachkov SV, Kudryakova IV, Afoshin AS, Leontyevskaya EA, Leontyevskaya Vasilyeva NV.	Microbiol Resour Announc	10.1128/mra.00484-22	2022
	Potential Protective Role of Amphibian Skin Bacteria Against Water Mold Saprolegnia spp.	Costa S, Proenca DN, Alves A, Morais PV, Lopes I.	J Fungi (Basel)	10.3390/jof11090649	2025
Metabolism	ACC Deaminase from Lysobacter gummosus OH17 Can Promote Root Growth in Oryza sativa Nipponbare Plants.	Laborda P, Ling J, Chen X, Liu F.	J Agric Food Chem	10.1021/acs.jafc.8b00063	2018
	Molecular detection of Batrachochytrium dendrobatidis (Chytridiomycota) and culturable skin bacteria associated with three critically endangered species of Atelopus (Anura: Bufonidae) in Ecuador.	Yanez Galarza JK, Riascos-Flores L, Naranjo-Briceno L, Carrera-Gonzalez A, Ortega-Andrade HM.	PeerJ	10.7717/peerj.18317	2024
	Expression of Biofilm-Degrading Enzymes in Plants and Automated High-Throughput Activity Screening Using Experimental Bacillus subtilis Biofilms.	Opdensteinen P, Dietz SJ, Gengenbach BB, Buyel JF.	Front Bioeng Biotechnol	10.3389/fbioe.2021.708150	2021
	Amphibian skin bacteria contain a wide repertoire of genes linked to their antifungal capacities.	Gonzalez-Serrano F, Romero-Contreras YJ, Orta AH, Basanta MD, Morales H, Sandoval Garcia G, Bello-Lopez E, Escobedo-Munoz AS, Bustamante VH, Avila-Akerberg V, Cevallos MA, Serrano M, Rebollar EA.	World J Microbiol Biotechnol	10.1007/s11274-025-04292-z	2025
	Differences in composition and potential function of the bacterial communities of cave- and surface-dwelling Mexican salamanders	Garcia-Sanchez J, Rovito S.	Anim Microbiome		2025
	Predatory bacteria as potential biofilm control and eradication agents in the food industry.	Mun W, Choi SY, Upatissa S, Mitchell RJ.	Food Sci Biotechnol	10.1007/s10068-023-01310-4	2023
Enzymology	Microbial diversity inside pumpkins: microhabitat-specific communities display a high antagonistic potential against phytopathogens.	Furnkranz M, Lukesch B, Muller H, Huss H, Grube M, Berg G.	Microb Ecol	10.1007/s00248-011-9942-4	2012
Enzymology	Enzymes hydrolyzing structural components and ferrous ion cause rusty-root symptom on ginseng (Panax ginseng).	Lee C, Kim KY, Lee JE, Kim S, Ryu D, Choi JE, An G.	J Microbiol Biotechnol	10.4014/jmb.1008.08010	2011
	Diversity of Bacterial Biota in Capnodis tenebrionis (Coleoptera: Buprestidae) Larvae.	Barak H, Kumar P, Zaritsky A, Mendel Z, Ment D, Kushmaro A, Ben-Dov E.	Pathogens	10.3390/pathogens8010004	2019
	The microbiota of an unpolluted calcareous soil faces up chlorophenols: Evidences of resistant strains with potential for bioremediation.	Caliz J, Vila X, Marti E, Sierra J, Nordgren J, Lindgren PE, Baneras L, Montserrat G.	Chemosphere	10.1016/j.chemosphere.2011.01.016	2011
Genetics	Soil Bacteria in Urban Community Gardens Have the Potential to Disseminate Antimicrobial Resistance Through Horizontal Gene Transfer.	Mafiz A, He Y, Zhang W, Zhang Y.	Front Microbiol	10.3389/fmicb.2021.771707	2021
Enzymology	Molecular detection of transcriptionally active bacteria from failed prosthetic hip joints removed during revision arthroplasty.	Riggio MP, Dempsey KE, Lennon A, Allan D, Ramage G, Bagg J.	Eur J Clin Microbiol Infect Dis	10.1007/s10096-010-0934-y	2010
Metabolism	Ecology and characterization of polyhydroxyalkanoate-producing microorganisms on and in plants.	Gasser I, Muller H, Berg G.	FEMS Microbiol Ecol	10.1111/j.1574-6941.2009.00734.x	2009
	Diversity and Activity of Lysobacter Species from Disease Suppressive Soils.	Gomez Exposito R, Postma J, Raaijmakers JM, De Bruijn I.	Front Microbiol	10.3389/fmicb.2015.01243	2015
Metabolism	The identification of 2,4-diacetylphloroglucinol as an antifungal metabolite produced by cutaneous bacteria of the salamander Plethodon cinereus.	Brucker RM, Baylor CM, Walters RL, Lauer A, Harris RN, Minbiole KP.	J Chem Ecol	10.1007/s10886-007-9352-8	2008
	Pseudomonas putida Represses JA- and SA-Mediated Defense Pathways in Rice and Promotes an Alternative Defense Mechanism Possibly through ABA Signaling.	Wang R, Wang HL, Tang RP, Sun MY, Chen TM, Duan XC, Lu XF, Liu D, Shi XC, Laborda P, Wang SY.	Plants (Basel)	10.3390/plants9121641	2020
	Interaction of Ginseng with Ilyonectria Root Rot Pathogens.	Bischoff Nunes I, Goodwin PH.	Plants (Basel)	10.3390/plants11162152	2022
Enzymology	Exploring the microbiota dynamics related to vegetable biomasses degradation and study of lignocellulose-degrading bacteria for industrial biotechnological application.	Ventorino V, Aliberti A, Faraco V, Robertiello A, Giacobbe S, Ercolini D, Amore A, Fagnano M, Pepe O.	Sci Rep	10.1038/srep08161	2015
Pathogenicity	Biofilm-degrading enzymes from Lysobacter gummosus.	Gokcen A, Vilcinskas A, Wiesner J.	Virulence	10.4161/viru.27919	2014
	The Polycyclic Aromatic Hydrocarbon (PAH) degradation activities and genome analysis of a novel strain Stenotrophomonas sp. Pemsol isolated from Mexico.	Elufisan TO, Rodriguez-Luna IC, Oyedara OO, Sanchez-Varela A, Hernandez-Mendoza A, Dantan Gonzalez E, Paz-Gonzalez AD, Muhammad K, Rivera G, Villalobos-Lopez MA, Guo X.	PeerJ	10.7717/peerj.8102	2020
	The first salamander defensin antimicrobial peptide.	Meng P, Yang S, Shen C, Jiang K, Rong M, Lai R.	PLoS One	10.1371/journal.pone.0083044	2013
	Microbial inoculation of seed for improved crop performance: issues and opportunities.	O'Callaghan M.	Appl Microbiol Biotechnol	10.1007/s00253-016-7590-9	2016
Pathogenicity	Interactions between amphibians' symbiotic bacteria cause the production of emergent anti-fungal metabolites.	Loudon AH, Holland JA, Umile TP, Burzynski EA, Minbiole KP, Harris RN.	Front Microbiol	10.3389/fmicb.2014.00441	2014
Phylogeny	Amphibian chytridiomycosis outbreak dynamics are linked with host skin bacterial community structure.	Bates KA, Clare FC, O'Hanlon S, Bosch J, Brookes L, Hopkins K, McLaughlin EJ, Daniel O, Garner TWJ, Fisher MC, Harrison XA.	Nat Commun	10.1038/s41467-018-02967-w	2018
	Indigenous populations of three closely related Lysobacter spp. in agricultural soils using real-time PCR.	Postma J, Schilder MT, van Hoof RA.	Microb Ecol	10.1007/s00248-011-9847-2	2011
	Inhibition of Batrachochytrium dendrobatidis Caused by Bacteria Isolated from the Skin of Boreal Toads, Anaxyrus (Bufo) boreas boreas, from Grand Teton National Park, Wyoming, USA.	Park ST, Collingwood AM, St-Hilaire S, Sheridan PP.	Microbiol Insights	10.4137/mbi.s13639	2014
Genetics	Diverse Cone-Snail Species Harbor Closely Related Streptomyces Species with Conserved Chemical and Genetic Profiles, Including Polycyclic Tetramic Acid Macrolactams.	Quezada M, Licona-Cassani C, Cruz-Morales P, Salim AA, Marcellin E, Capon RJ, Barona-Gomez F.	Front Microbiol	10.3389/fmicb.2017.02305	2017
	Surviving chytridiomycosis: differential anti-Batrachochytrium dendrobatidis activity in bacterial isolates from three lowland species of Atelopus.	Flechas SV, Sarmiento C, Cardenas ME, Medina EM, Restrepo S, Amezquita A.	PLoS One	10.1371/journal.pone.0044832	2012
Metabolism	Catacandins, novel anticandidal antibiotics of bacterial origin.	Meyers E, Cooper R, Dean L, Johnson JH, Slusarchyk DS, Trejo WH, Singh PD.	J Antibiot (Tokyo)	10.7164/antibiotics.38.1642	1985
Pathogenicity	Host-multiparasite interactions in amphibians: a review.	Herczeg D, Ujszegi J, Kasler A, Holly D, Hettyey A.	Parasit Vectors	10.1186/s13071-021-04796-1	2021
Enzymology	Cutaneous bacteria of the redback salamander prevent morbidity associated with a lethal disease.	Becker MH, Harris RN.	PLoS One	10.1371/journal.pone.0010957	2010
Phylogeny	Taxonomic and functional diversity of cultured seed associated microbes of the cucurbit family.	Khalaf EM, Raizada MN.	BMC Microbiol	10.1186/s12866-016-0743-2	2016
Phylogeny	Lysobacter ginsengisoli sp. nov., a novel species isolated from soil in Pocheon Province, South Korea.	Jung HM, Ten LN, Im WT, Yoo SA, Lee ST.	J Microbiol Biotechnol		2008
Phylogeny	Lysobacter soli sp. nov., isolated from soil of a ginseng field.	Srinivasan S, Kim MK, Sathiyaraj G, Kim HB, Kim YJ, Yang DC	Int J Syst Evol Microbiol	10.1099/ijs.0.016428-0	2009
Phylogeny	Lysobacter panaciterrae sp. nov., isolated from soil of a ginseng field.	Ten LN, Jung HM, Im WT, Yoo SA, Oh HM, Lee ST	Int J Syst Evol Microbiol	10.1099/ijs.0.002394-0	2009
Phylogeny	Lysobacter niabensis sp. nov. and Lysobacter niastensis sp. nov., isolated from greenhouse soils in Korea.	Weon HY, Kim BY, Kim MK, Yoo SH, Kwon SW, Go SJ, Stackebrandt E	Int J Syst Evol Microbiol	10.1099/ijs.0.64473-0	2007
Phylogeny	Lysobacter koreensis sp. nov., isolated from a ginseng field.	Lee JW, Im WT, Kim MK, Yang DC	Int J Syst Evol Microbiol	10.1099/ijs.0.63955-0	2006

References

#2935	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6980
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#43356	R.F. Sullivan, M.A. Holtman, G.J. Zylstra, J.F. White Jr, D.Y. Kobayashi: Taxonomic positioning of two biological control agents for plant diseases as Lysobacter enzymogenes based on phylogenetic analysis of 16S rDNA, fatty acid composition and phenotypic characteristics. J. app. Microbiol. 94: 1079 - 1086 2003 ( DOI 10.1046/j.1365-2672.2003.01932 )
#60654	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 55586
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#68369	Automatically annotated from API 20NE .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Lysobacter gummosus (DSM 6980, ATCC 29489, NCIB 11896)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Compound production

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

Pathway annotation

API 20NE

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_042674745

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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