Name: Vibrio sp. DSM 102884
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 174740

Type strain:

Species: Vibrio sp.

Culture col. no.: DSM 102884, BGMRC 2032

Strain history: <- C. Gao, Guangxi Acad. of Sciences, Nanning, China; BGMRC 2032

NCBI tax ID(s): 678 (species)

Other strains from Vibrio sp.

V. sp. DSM 12610, HALO 156
V. sp. CH 1278, DSM 12895
V. sp. CH 1285, E231b, DSM 12896
V. sp. CH 1287, E232b, DSM 12897
V. sp. CH 1326, E245b, DSM 12898
V. sp. CH 1327, DSM 12899
V. sp. CH 1356, DSM 12900
V. sp. CH 1357, DSM 12901
V. sp. CH 1380, DSM 12903
V. sp. CH 1381, DSM 12904
V. sp. B-11245, VNB-15, DSM 26054
V. sp. CCUG 21293
V. sp. CCUG 31602
V. sp. CCUG 31603
V. sp. CCUG 46764
V. sp. CCUG 46976
V. sp. CCUG 53234
V. sp. CCUG 61202
V. sp. CCUG 61203
V. sp. SW9, DSM 24596, CAIM 722
V. sp. P095, DSM 108851
V. sp. R5, DSM 108852
V. sp. P101TypB, DSM 108853
V. sp. 60.18M, DSM 108965
V. sp. 65.7M, DSM 108966
V. sp. IC18_D5, DSM 107313
V. sp. PO47 TypC, DSM 110182
V. sp. JCM 10713
V. sp. JCM 10883
V. sp. JCM 10884
V. sp. JCM 14512
V. sp. JCM 17072
V. sp. JCM 17658, FERM P-14737
V. sp. JCM 18904
V. sp. JCM 18905
V. sp. JCM 19052
V. sp. JCM 19053
V. sp. JCM 19061
V. sp. JCM 19063
V. sp. JCM 19064
V. sp. JCM 19234
V. sp. JCM 19235
V. sp. JCM 19236
V. sp. JCM 19237
V. sp. JCM 21396, IAM 14914
V. sp. JCM 21397, IAM 14915
V. sp. JCM 21398, IAM 14916
V. sp. JCM 21399, IAM 14917
V. sp. JCM 3732
V. sp. 10N.261.49.E11, DSM 113773
V. sp. 10N.261.55.A7, DSM 113774
V. sp. DS40M5, DSM 112539
V. sp. 10N.261.52.A1, DSM 114567
V. sp. 10N.222.54.B6, DSM 114568
V. sp. 10N.222.55.B3, DSM 114569
V. sp. 10N.222.55.F9, DSM 114570
V. sp. 10N.261.51.A7, DSM 114571
V. sp. 10N.222.52.B12, DSM 114572
V. sp. 10N.286.49.B3, DSM 114573
V. sp. 10N.286.46.E10, DSM 114574
V. sp. 10N.286.49.B1, DSM 114575
V. sp. 10N.286.51.E7, DSM 114579

Section

Vibrio sp. DSM 102884 is a bacterium that was isolated from soil from mangrove tree Bruguiera gymnorhiza.

Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	"Vibrionales"
	Family	*Vibrionaceae*
	Genus	*Vibrio*
	Full Scientific Name (LPSN)	Vibrio Pacini 1854 (Approved Lists 1980)

	Synonym	Beneckea
	Synonym	Lucibacterium
	Synonym	Allomonas

Information on culture and growth conditions Culture and growth conditions

[Ref.: #124493]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #124493]

Culture medium growth

[Ref.: #124493]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #124493]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68368]	amygdalin ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	arginine ChEBI	-	hydrolysis	* from API 20E
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #68368]	D-glucose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	D-mannitol ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #68368]	L-arabinose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	L-rhamnose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #68368]	melibiose ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	myo-inositol ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #68368]	sorbitol ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	sucrose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #68368]	acetoin ChEBI	no	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	-		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68368]	arginine dihydrolase	-	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E
[Ref.: #68368]	cytochrome oxidase	-	1.9.3.1	* from API 20E
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #124493]	19312	+	-	-	-	+	-	-	-	-	-	+	+	-	-	+	+	+	-	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #124493]	Sample type/isolated from	soil from mangrove tree Bruguiera gymnorhiza
[Ref.: #124493]	Geographic location (country and/or sea, region)	Guangxi, Qinzhou, maowei sea
[Ref.: #124493]	Country	China
[Ref.: #124493]	Country ISO 3 Code	CHN
[Ref.: #124493]	Continent	Asia
[Ref.: #124493]	Geographic location	21.9236°/108.8450°
* marker position based on {}

Availability in culture collections External links

[Ref.: #124493]

Culture collection no.

DSM 102884, BGMRC 2032

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#68368

Automatically annotated from API 20E .

#124493

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102884

* These data were automatically processed and therefore are not curated

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