Name: Luteimonas composti CC-YY255
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 17467

Type strain:

Species: Luteimonas composti

Strain Designation: CC-YY255

Culture col. no.: CCUG 53282, DSM 19790, BCRC 17598, CCUG 53595, CIP 109311

Strain history: CIP <- 2006, P. Kämpfer, Justus-Liebig Univ., Giessen, Germany: strain CC-YY255

NCBI tax ID(s): 398257 (species)

SI-ID 302765

BCRC 17598, CCUG 53595, CIP 109311, CCUG 53282, CCRC 17598, DSM 19790

Special Collections

Section

Luteimonas composti CC-YY255 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from compost from food waste.

Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Lysobacterales*
	Family	*Lysobacteraceae*
	Genus	*Luteimonas*
	Species	**Luteimonas composti**
	Full Scientific Name (LPSN)	Luteimonas composti Young et al. 2007

Information on morphological and physiological properties Morphology

[Ref.: #31951]	Gram stain	negative
[Ref.: #118717]	Gram stain	negative

[Ref.: #31951]	Cell length	1-1.5 µm

[Ref.: #31951]	Cell width	0.5 µm

[Ref.: #31951]	Cell shape	rod-shaped
[Ref.: #118717]	Cell shape	rod-shaped

[Ref.: #31951]	Motility	no
[Ref.: #118717]	Motility	yes

[Ref.: #59939]

Incubation period

1 day

[Ref.: #31951]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8319]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #8319]

Culture medium growth

[Ref.: #8319]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8319]

Culture medium composition

expand / minimize

[Ref.: #33290]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #33290]

Culture medium growth

[Ref.: #33290]

Culture medium composition

expand / minimize

[Ref.: #118717]

Culture medium

CIP Medium 72

[Ref.: #118717]

Culture medium growth

[Ref.: #118717]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #8319]	growth	28 °C
[Ref.: #31951]	growth	20-45 °C
[Ref.: #31951]	optimum	30 °C
[Ref.: #33290]	growth	30 °C
[Ref.: #59939]	growth	30-37 °C

	pH	Kind of pH		pH
[Ref.: #31951]			optimum	7
[Ref.: #31951]			growth	07-10

Information on physiology and metabolism Physiology and metabolism

[Ref.: #31951]	Oxygen tolerance	aerobe
[Ref.: #59939]	Oxygen tolerance	aerobe
[Ref.: #118717]	Oxygen tolerance	obligate aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #31951]		NaCl		growth	0-6	%
[Ref.: #31951]		NaCl		optimum	0-0.5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #31951]	aspartate ChEBI	+	carbon source
[Ref.: #31951]	esculin ChEBI	+	hydrolysis
[Ref.: #31951]	glucose ChEBI	+	carbon source
[Ref.: #31951]	glutamate ChEBI	+	carbon source
[Ref.: #31951]	inosine ChEBI	+	carbon source
[Ref.: #31951]	L-alaninamide ChEBI	+	carbon source
[Ref.: #31951]	maltose ChEBI	+	carbon source
[Ref.: #31951]	melibiose ChEBI	+	carbon source
[Ref.: #31951]	methyl pyruvate ChEBI	+	carbon source
[Ref.: #31951]	nitrate ChEBI	+	reduction
[Ref.: #118717]	nitrate ChEBI	+	reduction
[Ref.: #118717]	nitrite ChEBI	+	reduction
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #118717]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #31951]	catalase	+	1.11.1.6
[Ref.: #118717]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #31951]	cytochrome oxidase	+	1.9.3.1
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #118717]	oxidase	+
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #118717]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #118717]	11782	-	+	+	+	-	+	+	-	+	+	+	+	+	+	-	+	+	+	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8319]	Sample type/isolated from	compost from food waste
[Ref.: #8319]	Geographic location (country and/or sea, region)	Kinmen County
[Ref.: #8319]	Country	Taiwan, Province of China
[Ref.: #8319]	Country ISO 3 Code	TWN
[Ref.: #8319]	Continent	Asia

[Ref.: #59939]	Sample type/isolated from	Compost,food waste
[Ref.: #59939]	Geographic location (country and/or sea, region)	Kinmen County
[Ref.: #59939]	Country	Taiwan, Province of China
[Ref.: #59939]	Country ISO 3 Code	TWN
[Ref.: #59939]	Continent	Asia

[Ref.: #118717]	Sample type/isolated from	Environment, Compost
[Ref.: #118717]	Country	Taiwan, Province of China
[Ref.: #118717]	Country ISO 3 Code	TWN
[Ref.: #118717]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Biodegradation	#Composting
#Engineered	#Food production	#Food
#Engineered	#Waste	#Domestic waste

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8319]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #118717]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #8319]	Luteimonas composti strain CC-YY255 16S ribosomal RNA gene, partial sequence	DQ846687	1501	GenBank ENA	398257 tax ID

[Ref.: #31951]

GC-content

68.1 mol%

Availability in culture collections External links

[Ref.: #8319]

Culture collection no.

CCUG 53282, DSM 19790, BCRC 17598, CCUG 53595, CIP 109311

[Ref.: #86463]

SI-ID 302765

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Luteimonas saliphila sp. nov. and Luteimonas salinisoli sp. nov., two novel strains isolated from saline soils.	Sun JQ, Huang XX, Xu L, Wei HM	Int J Syst Evol Microbiol	10.1099/ijsem.0.005334	2022	*
Phylogeny	Luteimonas wenzhouensis Sp. Nov., A Chitinolytic Bacterium Isolated from a Landfill Soil.	Zhou J, Chen J, Ma J, Xu N, Xin F, Zhang W, Zhang H, Dong W, Jiang M	Curr Microbiol	10.1007/s00284-020-02293-9	2020	*
Phylogeny	Luteimonas marina sp. nov., isolated from seawater.	Baik KS, Park SC, Kim MS, Kim EM, Park C, Chun J, Seong CN	Int J Syst Evol Microbiol	10.1099/ijs.0.2008/000281-0	2008	*
Phylogeny	Luteimonas aestuarii sp. nov., isolated from tidal flat sediment.	Roh SW, Kim KH, Nam YD, Chang HW, Kim MS, Yoon JH, Oh HM, Bae JW	J Microbiol	10.1007/s12275-008-0189-9	2008	*
Phylogeny	Luteimonas aquatica sp. nov., isolated from fresh water from Southern Taiwan.	Chou JH, Cho NT, Arun AB, Young CC, Chen WM	Int J Syst Evol Microbiol	10.1099/ijs.0.65684-0	2008	*
Phylogeny	Luteimonas composti sp. nov., a moderately thermophilic bacterium isolated from food waste.	Young CC, Kampfer P, Chen WM, Yen WS, Arun AB, Lai WA, Shen FT, Rekha PD, Lin KY, Chou JH	Int J Syst Evol Microbiol	10.1099/ijs.0.64701-0	2007	*

References

#8319

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19790

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#31951

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28207 (see below)

#33290 ; Curators of the CIP;
#59939 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 53595

#68382

Automatically annotated from API zym .

#86463

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID302765.1 )

#118717 Collection of Institut Pasteur ; Curators of the CIP; CIP 109311

#28207

IJSEM 741 2007 ( DOI 10.1099/ijs.0.64701-0 , PubMed 17392198 )

* These data were automatically processed and therefore are not curated

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