[Ref.: #8529] |
Sample type/isolated from |
rat faeces |
|
[Ref.: #67770] |
Sample type/isolated from |
Rat feces |
|
[Ref.: #116391] |
Sample type/isolated from |
Animal, Rat, feces |
* marker position based on {}
|
|
Isolation sources categories |
#Host |
#Mammals |
#Muridae (Mouse/Rat) |
#Host Body Product |
#Gastrointestinal tract |
#Feces (Stool) |
|
|
-
Information on genomic background e.g. entries in nucleic sequence databass Sequence information
|
16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
|
|
Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #67770] |
Bifidobacterium animalis subsp. animalis gene for 16S ribosomal RNA, partial sequence, strain: JCM 1190 |
LC065042 |
1450 |
|
302912 tax ID |
[Ref.: #20218] |
Bifidobacterium animalis ATCC 25527 16S rRNA-23S rRNA intergenic spacer |
U09858 |
509 |
|
703613 tax ID |
* |
[Ref.: #20218] |
B.animalis DNA sequence for 16S rRNA |
X70971 |
1459 |
|
703613 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium animalis subsp. animalis strain CCUG 24606 16S ribosomal RNA gene, partial sequence |
GQ487634 |
147 |
|
302912 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium animalis gene for 16S rRNA, partial sequence, strain: JCM 1190 |
AB116277 |
481 |
|
28025 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium animalis subsp. animalis gene for 16S rRNA, partial sequence, strain: JCM 1190 |
AB507070 |
652 |
|
302912 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium animalis gene for 16S rRNA, partial sequence, strain: JCM 1190 |
D86185 |
1529 |
|
28025 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium animalis subsp. animalis strain KCTC 3219 16S ribosomal RNA gene, partial sequence |
GU361812 |
1493 |
|
302912 tax ID |
* |
|
|
-
Availability in culture collections External links
[Ref.: #8529] |
Culture collection no. |
DSM 20104, ATCC 25527, CIP 105419, JCM 1190, BCRC 14668, CCUG 24606, CGMCC 1.2268, KCTC 3125, LMG 10508, NCFB 2242, VTT E-96663, ISL 120 |
[Ref.: #71383] |
SI-ID 1236
|
* |
|
Literature: |
Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries. |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Metabolism |
Different effects of soybean protein and its derived peptides on the growth and metabolism of Bifidobacterium animalis subsp. animalis JCM 1190. |
Li W, Li H, Zhang Y, He L, Zhang C, Liu X |
Food Funct |
10.1039/d1fo00480h |
2021 |
* |
Pathogenicity |
Modulation of Proinflammatory Bacteria- and Lipid-Coupled Intracellular Signaling Pathways in a Transwell Triple Co-Culture Model by Commensal Bifidobacterium Animalis R101-8. |
Ghadimi D, Nielsen A, Hassan MFY, Folster-Holst R, Ebsen M, Frahm SO, Rocken C, de Vrese M, Heller KJ |
Antiinflamm Antiallergy Agents Med Chem |
10.2174/1871523019999201029115618 |
2021 |
* |
Phylogeny |
Bifidobacterium canis sp. nov., a novel member of the Bifidobacterium pseudolongum phylogenetic group isolated from faeces of a dog (Canis lupus f. familiaris). |
Neuzil-Bunesova V, Lugli GA, Modrackova N, Makovska M, Mrazek J, Mekadim C, Musilova S, Svobodova I, Spanek R, Ventura M, Killer J |
Int J Syst Evol Microbiol |
10.1099/ijsem.0.004378 |
2020 |
* |
Genetics |
Staying alive: growth and survival of Bifidobacterium animalis subsp. animalis under in vitro and in vivo conditions. |
Egan M, Bottacini F, O'Connell Motherway M, Casey PG, Morrissey R, Melgar S, Faurie JM, Chervaux C, Smokvina T, van Sinderen D |
Appl Microbiol Biotechnol |
10.1007/s00253-018-9413-7 |
2018 |
* |
Metabolism |
The potential of bifidobacteria as a source of natural folate. |
D'Aimmo MR, Mattarelli P, Biavati B, Carlsson NG, Andlid T |
J Appl Microbiol |
10.1111/j.1365-2672.2012.05261.x |
2012 |
* |
Genetics |
Short communication: the complete genome sequence of Bifidobacterium animalis subspecies animalis ATCC 25527(T) and comparative analysis of growth in milk with B. animalis subspecies lactis DSM 10140(T). |
Loquasto JR, Barrangou R, Dudley EG, Roberts RF |
J Dairy Sci |
10.3168/jds.2011-4499 |
2011 |
* |
Pathogenicity |
A dynamic model that simulates the human upper gastrointestinal tract for the study of probiotics. |
Mainville I, Arcand Y, Farnworth ER |
Int J Food Microbiol |
10.1016/j.ijfoodmicro.2004.08.020 |
2005 |
* |
Phylogeny |
Polyphasic taxonomic analysis of Bifidobacterium animalis and Bifidobacterium lactis reveals relatedness at the subspecies level: reclassification of Bifidobacterium animalis as Bifidobacterium animalis subsp. animalis subsp. nov. and Bifidobacterium lactis as Bifidobacterium animalis subsp. lactis subsp. nov. |
Masco L, Ventura M, Zink R, Huys G, Swings J |
Int J Syst Evol Microbiol |
10.1099/ijs.0.03011-0 |
2004 |
* |
Phylogeny |
Rapid identification, differentiation, and proposed new taxonomic classification of Bifidobacterium lactis. |
Ventura M, Zink R |
Appl Environ Microbiol |
10.1128/AEM.68.12.6429-6434.2002 |
2002 |
* |
Phylogeny |
Bifidobacterium lactis Meile et al. 1997 is a subjective synonym of Bifidobacterium animalis (Mitsuoka 1969) Scardovi and Trovatelli 1974. |
Cai Y, Matsumoto M, Benno Y |
Microbiol Immunol |
10.1111/j.1348-0421.2000.tb02568.x |
2000 |
* |
Phylogeny |
Characterization of fructose 6 phosphate phosphoketolases purified from Bifidobacterium species. |
Grill JP, Crociani J, Ballongue J |
Curr Microbiol |
10.1007/BF00294634 |
1995 |
* |
|
- References
-
#8529 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 20104
|
-
-
-
#39288 |
; Curators of the CIP;
|
-
-
#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
|
-
#68371 |
Automatically annotated from API 50CH acid .
|
-
#68382 |
Automatically annotated from API zym .
|
-
#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
|
-
-
-
#71383 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID1236.1 )
|
-
#116391 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 105419
|
- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
|
|