Vibrio celticus (DSM 26172, CECT 7224, LMG 23850)

Name: Vibrio celticus (DSM 26172, CECT 7224, LMG 23850)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 17356

Type strain

Strain Designation Rd 8.15

Culture col. no. DSM 26172 CECT 7224 LMG 23850 Rd 8.15

NCBI tax ID(s) 446372

Special Collections DSMZ

History <- CECT <- J. L. Romalde, University of Santiago de Compostela, Spain <- R. Beaz

Links

Vibrio celticus Rd 8.15 is an animal pathogen that was isolated from cultured clams Ruditapes philippinarum.

animal pathogen genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 307624

CAIM 1849,LMG 23850,CECT 7224,DSM 26172

@ref 20215

Last LPSN update 2026-02-09 11:22:12

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order "Vibrionales"

Family Vibrionaceae

Genus Vibrio

Species Vibrio celticus

Full scientific name Vibrio celticus Beaz-Hidalgo et al. 2011

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	93.8
125438	negative	100

Multimedia

@ref:	18177
multimedia content:	DSM_26172.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_26172.jpg
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
18177	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
18177	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	95.3

Spore formation

@ref	Spore formation	Confidence
125439		94.8
125438		93.178

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Food production	#Aquaculture
#Host	#Invertebrates (Other)	#Mollusca

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
18177	cultured clams Ruditapes philippinarum	Ruditapes philippinarum	Galicia, Redondela	Spain	ESP	Europe

Taxonmaps

69479

Global distribution of 16S sequence EF599162 (>99% sequence identity) for Vibrio from Microbeatlas

Aquatic Samples	5115
Soil Samples	160
Animal Samples	960
Plant Samples	30
Total Samples	6265

Interaction and safety

Risk assessment

@ref	Pathogenicity animal	Biosafety level	Biosafety level comment
18177		1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM2434733v1 assembly for Vibrio celticus CECT 7224	complete	GCA_024347335	446372.16	8081917652	446372	99.15
66792	VcelticusCECT7224_Velvet_Prokka assembly for Vibrio celticus CECT 7224	scaffold	GCA_900089965	446372.11	2767802214	446372	35.47
66792	ASM215652v1 assembly for Vibrio celticus Rd 8.15	contig	GCA_002156525	446372.6	8048142980	446372	32.76

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
18177	Vibrio celticus strain LMG 23850 16S ribosomal RNA gene, partial sequence	EF599162	1542		446372

GC content

18177

GC-content (mol%)44.6

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Vibrio celticus CECT 7224
NCBI: GCA_024347335

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	94.80	no
125439	motility	BacteriaNetⓘ	yes	67.00	no
125439	gram_stain	BacteriaNetⓘ	negative	93.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	95.30	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Vibrio celticus CECT 7224
NCBI: GCA_024347335.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	100.00	no
125438	anaerobic	anaerobicⓘ	no	96.21	no
125438	aerobic	aerobicⓘ	no	67.21	no
125438	spore-forming	spore-formingⓘ	no	93.18	no
125438	thermophilic	thermophileⓘ	no	100.00	yes
125438	flagellated	motile2+ⓘ	yes	86.77	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genome-Wide Identification and Functional Characterization of beta-Agarases in Vibrio astriarenae Strain HN897.	Liu Y, Jin X, Wu C, Zhu X, Liu M, Call DR, Zhao Z.	Front Microbiol	10.3389/fmicb.2020.01404	2020
Phylogeny	Vibrio celticus sp. nov., a new Vibrio species belonging to the Splendidus clade with pathogenic potential for clams.	Beaz-Hidalgo R, Dieguez AL, Cleenwerck I, Balboa S, Doce A, de Vos P, Romalde JL	Syst Appl Microbiol	10.1016/j.syapm.2010.06.007	2010

References

#18177	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26172
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Vibrio celticus (DSM 26172, CECT 7224, LMG 23850)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_024347335

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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