Bifidobacterium animalis subsp. lactis (CCUG 37979, DSM 10140, CIP 105265)

Name: Bifidobacterium animalis subsp. lactis (CCUG 37979, DSM 10140, CIP 105265)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1733

Type strain

Strain Designation UR1

Culture col. no. CCUG 37979 DSM 10140 CIP 105265 JCM 10602 UR1 6 more

NCBI tax ID(s) 555970 302911

Special Collections DSMZ CCUG JCM CIP

History DSMZ <- L. Meile <- U. Rüger, UR1 JCM <-- M. Matsumoto LKM501 <-- DSM 10140 <-- L. Meile <-- U. Rüger UR1. CIP <- 1997, DSMZ <- L. Meile <- U. Rüger: strain UR1

Links

Bifidobacterium animalis subsp. lactis UR1 is an anaerobe, Gram-positive, rod-shaped bacterium that was isolated from yoghurt.

Gram-positive rod-shaped anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 11835

LMG 18314,CCUG 37979,CIP 105265,DSM 10140,JCM 10602,NCAIM B.02020,NRRL B-41405,BCRC 17394,CCRC 17394,CGMCC 1.2226,VTT E-97847

@ref 20215

Last LPSN update 2026-05-29 08:25:19

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Bifidobacteriales

Family Bifidobacteriaceae

Genus Bifidobacterium

Species Bifidobacterium animalis subsp. lactis

Full scientific name Bifidobacterium animalis subsp. lactis (Meile et al. 1997) Masco et al. 2004

Synonyms (1)

Bifidobacterium lactis

BacDive ID	Other strains from **Bifidobacterium animalis subsp. lactis** (2)	Type strain
147341	B. animalis subsp. lactis CCUG 33397
156458	B. animalis subsp. lactis CCUG 61907

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Confidence
120524	positive	rod-shaped
125438				95

Colony morphology

120524

Hemolysis ability0

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
3817	BIFIDOBACTERIUM MEDIUM (DSMZ Medium 58)	Medium recipe at MediaDive	Name: BIFIDOBACTERIUM MEDIUM (DSMZ Medium 58) Composition: Glucose 10.0 g/l Casein peptone 10.0 g/l Bacto Soytone 5.0 g/l Meat extract 5.0 g/l Yeast extract 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l MnSO4 x H2O 0.05 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Tween 80 Resazurin Distilled water
41576	MEDIUM 20 - for Anaerobic bacteria		Agar (15.000 g);Glucose (5.000 g);Yeast extract (20.000 g);Tryptone (30.000 g);Cysteine hydrochloride (0.500 g);distilled water (1000.000 ml);Hemin solution -M00149 (25.000 ml)
120524	CIP Medium 20	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
3817	positive	growth	37
41576	positive	growth	37
53994	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
3817	anaerobe
53994	anaerobe
125439	obligate anaerobe	90.193

Spore formation

@ref	Spore formation	Confidence
125438		90.471
125439		99.398

Murein

@ref	Murein short key	Type
3817	A11.21	A3alpha L-Lys(L-Orn)-L-Ala(L-Ser)-L-Ala₂

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	-	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	-	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	+	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
120524	4853 ChEBI	esculin	+	hydrolysis
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	+	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
120524	17632 ChEBI	nitrate	-	reduction
120524	17632 ChEBI	nitrate	+	respiration
120524	16301 ChEBI	nitrite	-	reduction
68371	0 ChEBI	Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	+	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
120524	amylase	-
68382	beta-galactosidase	+	3.2.1.23	from API zym
120524	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
120524	caseinase	-	3.4.21.50
120524	catalase	-	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
120524	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
120524	lipase	-
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
120524	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
120524	tween esterase	-
120524	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

Fatty acid profile

Metadata FA analysis

@ref

53994

Fatty acid	Percentage	ECL
C16:0	27.9	16
C14:0	26.6	14
C18:1 ω9c	14.5	17.769
C19:0 CYCLO ω9c	8.5	18.87
C18:1 ω9c DMA	6.3	18.226
C16:1 ω9c	3.4	15.774
C18:0	3.1	18
C18:2 ω6,9c/C18:0 ANTE	2.5	17.724
C12:0	2.5	12
C13:0 3OH/C15:1 i I/H	2.4	14.469
C13:1 at 12-13	0.9	12.931
C17:1 ω5c ISO	0.7	16.461
C18:1 ω7c /12t/9t	0.7	17.824

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
120524	-	-	+	+	-	+	-	+	-	-	+	+	+	+	-	+	+	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
3817	-	-	-	-	+	+	+	-	-	-	+	+	-	-	-	-	-	-	-	-	-	+	-	+	-	+	+	+	+	+	+	+	-	-	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-
3817	-	-	-	-	+	+	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-	+/-	-	+	-	+	+	+	+	+	+	+	-	-	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-
3817	-	-	-	-	+	+	+	-	-	-	+	+	-	-	-	-	-	-	-	-	-	+	-	+	-	+	+	-	+	+	+	+	-	-	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-
120524	not determinedn.d.	-	-	-	+/-	+	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+/-	-	+	+/-	-	+	+	+	+	-	-	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	+/-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Food production	#Dairy product

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
3817	yoghurt	Switzerland	CHE	Europe
53994	Yoghurt
67770	Fermented milk
120524	Yoghurt

Taxonmaps

69479

Global distribution of 16S sequence LC071817 (>99% sequence identity) for Bifidobacterium animalis subclade from Microbeatlas

Aquatic Samples	4025
Soil Samples	1941
Animal Samples	125902
Plant Samples	767
Total Samples	132635

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
3817	1	Risk group (German classification) According to TRBA 466
120524	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM2296v1 assembly for Bifidobacterium animalis subsp. lactis DSM 10140	complete	GCA_000022965	555970.3	644736330	555970	99.15

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Bifidobacterium animalis subsp. lactis gene for 16S rRNA, partial sequence, strain: YIT 4121	AB050136	1529	555970
20218	Bifidobacterium animalis subsp. lactis gene for 16S rRNA, partial sequence	AB195798	490	302911
20218	Bifidobacterium animalis subsp. lactis gene for 16S rRNA, partial sequence, strain: JCM 10602	AB507074	655	302911
3817	B.lactis DNA 16S and 23S ribosomal RNA	X89513	2104	555970
67770	Bifidobacterium animalis subsp. lactis gene for 16S ribosomal RNA, partial sequence, strain: JCM 10602	LC071817	1436	302911
124043	Bifidobacterium animalis subsp. lactis strain DSM 10140 16S-23S ribosomal RNA intergenic spacer and 23S ribosomal RNA gene, partial sequence.	KU714513	466	302911

GC content

@ref	GC-content (mol%)	Method
3817	62
67770	61.3	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM2296v1 assembly for Bifidobacterium animalis subsp. lactis DSM 10140
BV-BRC: 555970.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate anaerobe	90.19	no
125439	gram_stain	BacteriaNetⓘ	positive	68.50	no
125439	motility	BacteriaNetⓘ	no	84.41	no
125439	spore_formation	BacteriaNetⓘ	no	99.40	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Bifidobacterium animalis subsp. lactis DSM 10140
PATRIC: 555970.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	85.97	no
125438	anaerobic	anaerobicⓘ	yes	84.92	yes
125438	spore-forming	spore-formingⓘ	no	90.47	no
125438	aerobic	aerobicⓘ	no	93.42	no
125438	thermophilic	thermophileⓘ	no	93.10	yes
125438	flagellated	motile2+ⓘ	no	95.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Development of a Strain-Specific Detection and Quantification Method for Bifidobacterium animalis subsp. lactis HN019 Using WGS-SNP Analysis and qPCR.	Mao D, Zhao L, Zhao B, Xu H, Zhang Q.	Microorganisms	10.3390/microorganisms13071596	2025
	Cannabidiol reshapes the gut microbiome to promote endurance exercise in mice.	Chen S, Lee YB, Song MY, Lim C, Cho H, Shim HJ, Kim JS, Park BH, Kim JK, Bae EJ.	Exp Mol Med	10.1038/s12276-025-01404-5	2025
Genetics	Whole-genome resequencing and transcriptional profiling association analysis revealed the intraspecies difference response to oligosaccharides utilization in Bifidobacterium animalis subsp. lactis.	Lan Z, Zhang X, Xu M, Kong J, Zuo X, Wang Y, Wang C, Teng Y, Ni Y, Zhang Y.	Front Microbiol	10.3389/fmicb.2024.1375384	2024
	Lactobacilli and Bifidobacteria: A Parapostbiotic Approach to Study and Explain Their Mutual Bioactive Influence.	Altieri C, Filippone A, Bevilacqua A, Corbo MR, Sinigaglia M.	Foods	10.3390/foods13182966	2024
	Facile and efficient chemical synthesis of gluco-oligosaccharides (GlcOS) with diverse glycosidic linkages as potential prebiotics to promote the growth of probiotic bacteria.	Zeng M, Li N, Astmann T, Oh JH, van Pijkeren JP, Pan X.	Food Res Int	10.1016/j.foodres.2022.112436	2023
Biotechnology	Development of Delivery Systems with Prebiotic and Neuroprotective Potential of Industrial-Grade Cannabis sativa L.	Sip S, Stasilowicz-Krzemien A, Sip A, Szulc P, Neumann M, Kryszak A, Cielecka-Piontek J.	Molecules	10.3390/molecules29153574	2024
	Facile and efficient chemical synthesis of gluco-oligosaccharides (GlcOS) with diverse glycosidic linkages as potential prebiotics to promote the growth of probiotic bacteria	Zeng M, Li N, Astmann T, Oh JH, van Pijkeren JP, Pan X.	Food Research International.		2023
	Effects of different environmental stresses on cell surface hydrophobicity of lactobacilli, bifidobacteria and propionibacteria	Racioppo A, Accettulli A, d'Amelio A, Corbo M, Sinigaglia M, Speranza B, Bevilacqua A.	BMC Microbiol		2025
	The Tetracycline Resistance Gene, tet(W) in Bifidobacterium animalis subsp. lactis Follows Phylogeny and Differs From tet(W) in Other Species.	Nohr-Meldgaard K, Struve C, Ingmer H, Agerso Y.	Front Microbiol	10.3389/fmicb.2021.658943	2021
	Highly efficient CRISPR-Cas9 base editing in Bifidobacterium with bypass of restriction modification systems.	Lin H-C, Hsiao W-C, Hsu Y-C, Lin M-C, Hsu C-C, Zhang MM.	Appl Environ Microbiol	10.1128/aem.01985-24	2025
Genetics	Draft Genome Sequences of Bifidobacterium animalis Consecutively Isolated from Healthy Japanese Individuals.	Tsukimi T, Watabe T, Tanaka K, Sato MP, Suzuki H, Tomita M, Fukuda S.	J Genomics	10.7150/jgen.38516	2020
	Ultrasound can increase biofilm formation by Lactiplantibacillus plantarum and Bifidobacterium spp.	Racioppo A, Speranza B, Altieri C, Sinigaglia M, Corbo MR, Bevilacqua A.	Front Microbiol	10.3389/fmicb.2023.1094671	2023
	The Antidiabetic Potential of Probiotics: A Review.	Li S, Liu Z, Zhang Q, Su D, Wang P, Li Y, Shi W, Zhang Q.	Nutrients	10.3390/nu16152494	2024
	Plant-Based Fermented Beverages: Nutritional Composition, Sensory Properties, and Health Benefits.	Hidalgo-Fuentes B, de Jesus-Jose E, Cabrera-Hidalgo AJ, Sandoval-Castilla O, Espinosa-Solares T, Gonzalez-Reza RM, Zambrano-Zaragoza ML, Liceaga AM, Aguilar-Toala JE.	Foods	10.3390/foods13060844	2024
	Bifidobacterium and the intestinal mucus layer.	Gutierrez A, Pucket B, Engevik MA.	Microbiome Res Rep	10.20517/mrr.2023.37	2023
Genetics	Complete genome sequence of the Bifidobacterium animalis subspecies lactis BL3, preventive probiotics for acute colitis and colon cancer.	Kang J, Chung WH, Lim TJ, Lim S, Nam YD.	New Microbes New Infect	10.1016/j.nmni.2017.05.012	2017
	Substrate recognition mode of a glycoside hydrolase family 42 beta-galactosidase from Bifidobacterium longum subspecies infantis (BiBga42A) revealed by crystallographic and mutational analyses.	Gotoh A, Hidaka M, Sakurama H, Nishimoto M, Kitaoka M, Sakanaka M, Fushinobu S, Katayama T.	Microbiome Res Rep	10.20517/mrr.2023.14	2023
Phylogeny	The urinary microbiota composition and functionality of calcium oxalate stone formers.	Xie J, Zhang XQ, Guo JN, Yuan Q, Xiao KF, Yuan YQ.	Front Cell Infect Microbiol	10.3389/fcimb.2024.1394955	2024
Metabolism	Current Trends and Technological Advancements in the Use of Oxalate-Degrading Bacteria as Starters in Fermented Foods-A Review.	Al-Kabe SH, Niamah AK.	Life (Basel)	10.3390/life14101338	2024
Pathogenicity	Functional and chemical properties of Phoenix dactylifera l. Polysaccharides and the effect of date flesh and seed intervention on some blood biomarkers: A contrastive analysis.	Noorbakhsh H, Rabbani Khorasgani M.	Food Chem X	10.1016/j.fochx.2023.100834	2023
	Novel Insights into the Molecular Mechanisms Underlying Robustness and Stability in Probiotic Bifidobacteria.	Schopping M, Goel A, Jensen K, Faria RA, Franzen CJ, Zeidan AA.	Appl Environ Microbiol	10.1128/aem.00082-23	2023
	Materials Used for the Microencapsulation of Probiotic Bacteria in the Food Industry.	Kowalska E, Ziarno M, Ekielski A, Zelazinski T.	Molecules	10.3390/molecules27103321	2022
	The Impact of Probiotics, Prebiotics, and Synbiotics during Pregnancy or Lactation on the Intestinal Microbiota of Children Born by Cesarean Section: A Systematic Review.	Martin-Pelaez S, Cano-Ibanez N, Pinto-Gallardo M, Amezcua-Prieto C.	Nutrients	10.3390/nu14020341	2022
	Unveiling the inhibition mechanism of Clostridioides difficile by Bifidobacterium longum via multiomics approach.	Jo SH, Jeon HJ, Song WS, Lee JS, Kwon JE, Park JH, Kim YR, Kim MG, Baek JH, Kwon SY, Kim JS, Yang YH, Kim YG.	Front Microbiol	10.3389/fmicb.2023.1293149	2023
	Bifidobacterium beta-Glucosidase Activity and Fermentation of Dietary Plant Glucosides Is Species and Strain Specific.	Modrackova N, Vlkova E, Tejnecky V, Schwab C, Neuzil-Bunesova V.	Microorganisms	10.3390/microorganisms8060839	2020
	Short communication: the complete genome sequence of Bifidobacterium animalis subspecies animalis ATCC 25527(T) and comparative analysis of growth in milk with B. animalis subspecies lactis DSM 10140(T).	Loquasto JR, Barrangou R, Dudley EG, Roberts RF.	J Dairy Sci	10.3168/jds.2011-4499	2011
Phylogeny	Bifidobacterium animalis subsp. lactis ATCC 27673 is a genomically unique strain within its conserved subspecies.	Loquasto JR, Barrangou R, Dudley EG, Stahl B, Chen C, Roberts RF.	Appl Environ Microbiol	10.1128/aem.01777-13	2013
	Complete genome sequence of Bifidobacterium animalis subsp. lactis BB-12, a widely consumed probiotic strain.	Garrigues C, Johansen E, Pedersen MB.	J Bacteriol	10.1128/jb.00109-10	2010
Phylogeny	Identification of species belonging to the Bifidobacterium genus by PCR-RFLP analysis of a hsp60 gene fragment.	Baffoni L, Stenico V, Strahsburger E, Gaggia F, Di Gioia D, Modesto M, Mattarelli P, Biavati B.	BMC Microbiol	10.1186/1471-2180-13-149	2013
Enzymology	Role of bifidobacteria in the hydrolysis of chlorogenic acid.	Raimondi S, Anighoro A, Quartieri A, Amaretti A, Tomas-Barberan FA, Rastelli G, Rossi M.	Microbiologyopen	10.1002/mbo3.219	2015
Genetics	Genome-Wide Assessment of Stress-Associated Genes in Bifidobacteria.	Schopping M, Vesth T, Jensen K, Franzen CJ, Zeidan AA.	Appl Environ Microbiol	10.1128/aem.02251-21	2022
Pathogenicity	Exploring the Ecology of Bifidobacteria and Their Genetic Adaptation to the Mammalian Gut.	Duranti S, Longhi G, Ventura M, van Sinderen D, Turroni F.	Microorganisms	10.3390/microorganisms9010008	2020
	Prebiotic potential of Agave angustifolia Haw fructans with different degrees of polymerization.	Velazquez-Martinez JR, Gonzalez-Cervantes RM, Hernandez-Gallegos MA, Mendiola RC, Aparicio AR, Ocampo ML.	Molecules	10.3390/molecules190812660	2014
Metabolism	Synbiotic-driven improvement of metabolic disturbances is associated with changes in the gut microbiome in diet-induced obese mice.	Ke X, Walker A, Haange SB, Lagkouvardos I, Liu Y, Schmitt-Kopplin P, von Bergen M, Jehmlich N, He X, Clavel T, Cheung PCK.	Mol Metab	10.1016/j.molmet.2019.01.012	2019
Enzymology	Biochemical Basis of Xylooligosaccharide Utilisation by Gut Bacteria.	Singh RP, Bhaiyya R, Thakur R, Niharika J, Singh C, Latousakis D, Saalbach G, Nepogodiev SA, Singh P, Sharma SC, Sengupta S, Juge N, Field RA.	Int J Mol Sci	10.3390/ijms23062992	2022
Metabolism	Genomic overview and biological functions of exopolysaccharide biosynthesis in Bifidobacterium spp.	Hidalgo-Cantabrana C, Sanchez B, Milani C, Ventura M, Margolles A, Ruas-Madiedo P.	Appl Environ Microbiol	10.1128/aem.02977-13	2014
Metabolism	Oxalate-degrading activity in Bifidobacterium animalis subsp. lactis: impact of acidic conditions on the transcriptional levels of the oxalyl coenzyme A (CoA) decarboxylase and formyl-CoA transferase genes.	Turroni S, Bendazzoli C, Dipalo SC, Candela M, Vitali B, Gotti R, Brigidi P.	Appl Environ Microbiol	10.1128/aem.00844-10	2010
Metabolism	Catabolism of glucose and lactose in Bifidobacterium animalis subsp. lactis, studied by 13C Nuclear Magnetic Resonance.	Gonzalez-Rodriguez I, Gaspar P, Sanchez B, Gueimonde M, Margolles A, Neves AR.	Appl Environ Microbiol	10.1128/aem.02529-13	2013
Phylogeny	Comparative sequence analysis of the tuf and recA genes and restriction fragment length polymorphism of the internal transcribed spacer region sequences supply additional tools for discriminating Bifidobacterium lactis from Bifidobacterium animalis.	Ventura M, Zink R.	Appl Environ Microbiol	10.1128/aem.69.12.7517-7522.2003	2003
	Comparative Genomics Revealed Genetic Diversity and Species/Strain-Level Differences in Carbohydrate Metabolism of Three Probiotic Bifidobacterial Species.	Odamaki T, Horigome A, Sugahara H, Hashikura N, Minami J, Xiao JZ, Abe F.	Int J Genomics	10.1155/2015/567809	2015
Metabolism	Probiotics genomics.	Siezen RJ, Wilson G.	Microb Biotechnol	10.1111/j.1751-7915.2009.00159.x	2010
Phylogeny	Phylogenetic Analysis of the Bifidobacterium Genus Using Glycolysis Enzyme Sequences.	Brandt K, Barrangou R.	Front Microbiol	10.3389/fmicb.2016.00657	2016
Metabolism	Esterases From Bifidobacteria Exhibit the Conversion of Albiflorin in Gut Microbiota.	Peng R, Han P, Fu J, Zhang ZW, Ma SR, Pan LB, Xia YY, Yu H, Xu H, Liu CX, Wang Y.	Front Microbiol	10.3389/fmicb.2022.880118	2022
	Biomarkers and Utility of the Antioxidant Potential of Probiotic Lactobacilli and Bifidobacteria as Representatives of the Human Gut Microbiota.	Averina OV, Poluektova EU, Marsova MV, Danilenko VN.	Biomedicines	10.3390/biomedicines9101340	2021
Enzymology	Detection of Bifidobacterium animalis subsp. lactis (Bb12) in the intestine after feeding of sows and their piglets.	Solano-Aguilar G, Dawson H, Restrepo M, Andrews K, Vinyard B, Urban JF.	Appl Environ Microbiol	10.1128/aem.00309-08	2008
Phylogeny	Investigation of the evolutionary development of the genus Bifidobacterium by comparative genomics.	Lugli GA, Milani C, Turroni F, Duranti S, Ferrario C, Viappiani A, Mancabelli L, Mangifesta M, Taminiau B, Delcenserie V, van Sinderen D, Ventura M.	Appl Environ Microbiol	10.1128/aem.02004-14	2014
	Phylogenetic identification of bacterial MazF toxin protein motifs among probiotic strains and foodborne pathogens and potential implications of engineered probiotic intervention in food.	Yan X, Gurtler JB, Fratamico PM, Hu J, Juneja VK.	Cell Biosci	10.1186/2045-3701-2-39	2012
Metabolism	Diversity, ecology and intestinal function of bifidobacteria.	Bottacini F, Ventura M, van Sinderen D, O'Connell Motherway M.	Microb Cell Fact	10.1186/1475-2859-13-s1-s4	2014
	Dairy Lactic Acid Bacteria and Their Potential Function in Dietetics: The Food-Gut-Health Axis.	Agagunduz D, Yilmaz B, Sahin TO, Gunesliol BE, Ayten S, Russo P, Spano G, Rocha JM, Bartkiene E, Ozogul F.	Foods	10.3390/foods10123099	2021
	Evaluation of Dietary Supplements Containing Viable Bacteria by Cultivation/MALDI-TOF Mass Spectrometry and PCR Identification.	Mohar Lorbeg P, Golob M, Kramer M, Treven P, Bogovic Matijasic B.	Front Microbiol	10.3389/fmicb.2021.700138	2021
	Characterisation of a Hydroxycinnamic Acid Esterase From the Bifidobacterium longum subsp. longum Taxon.	Kelly SM, O'Callaghan J, Kinsella M, van Sinderen D.	Front Microbiol	10.3389/fmicb.2018.02690	2018
Genetics	Comparative Analyses of the Transport Proteins Encoded within the Genomes of nine Bifidobacterium Species.	Zafar H, Saier MH.	Microb Physiol	10.1159/000518954	2022
	Prevalence of Antibiotic Resistance Genes among Human Gut-Derived Bifidobacteria.	Duranti S, Lugli GA, Mancabelli L, Turroni F, Milani C, Mangifesta M, Ferrario C, Anzalone R, Viappiani A, van Sinderen D, Ventura M.	Appl Environ Microbiol	10.1128/aem.02894-16	2017
	Effects of a Multispecies Probiotic Mixture on Glycemic Control and Inflammatory Status in Women with Gestational Diabetes: A Randomized Controlled Clinical Trial.	Jafarnejad S, Saremi S, Jafarnejad F, Arab A.	J Nutr Metab	10.1155/2016/5190846	2016
Genetics	Comparative genomics of Bifidobacterium, Lactobacillus and related probiotic genera.	Lukjancenko O, Ussery DW, Wassenaar TM.	Microb Ecol	10.1007/s00248-011-9948-y	2012
Pathogenicity	Microbial Medicine: Prebiotic and Probiotic Functional Foods to Target Obesity and Metabolic Syndrome.	Green M, Arora K, Prakash S.	Int J Mol Sci	10.3390/ijms21082890	2020
	DNA enrichment and tagmentation method for species-level identification and strain-level differentiation using ON-rep-seq.	Krych L, Castro-Mejia JL, Forero-Junco LM, Moesby DN, Mikkelsen MB, Rasmussen MA, Sykulski M, Nielsen DS.	Commun Biol	10.1038/s42003-019-0617-x	2019
	Gene structure and transcriptional organization of the dnaK operon of Bifidobacterium breve UCC 2003 and application of the operon in bifidobacterial tracing.	Ventura M, Zink R, Fitzgerald GF, van Sinderen D.	Appl Environ Microbiol	10.1128/aem.71.1.487-500.2005	2005
	Efficient protection of microorganisms for delivery to the intestinal tract by cellulose sulphate encapsulation.	Gunzburg WH, Aung MM, Toa P, Ng S, Read E, Tan WJ, Brandtner EM, Dangerfield J, Salmons B.	Microb Cell Fact	10.1186/s12934-020-01465-3	2020
	Effects of probiotic yogurt consumption on inflammatory biomarkers in patients with type 2 diabetes.	Mohamadshahi M, Veissi M, Haidari F, Shahbazian H, Kaydani GA, Mohammadi F.	Bioimpacts	10.5681/bi.2014.007	2014
	Cloning, heterologous expression, and sequencing of a novel proline iminopeptidase gene, pepI, from Lactobacillus delbrueckii subsp. lactis DSM 7290.	Klein JR, Schmidt U, Plapp R.	Microbiology (Reading)	10.1099/13500872-140-5-1133	1994
Genetics	Comparative genomics of the Bifidobacterium breve taxon.	Bottacini F, O'Connell Motherway M, Kuczynski J, O'Connell KJ, Serafini F, Duranti S, Milani C, Turroni F, Lugli GA, Zomer A, Zhurina D, Riedel C, Ventura M, van Sinderen D.	BMC Genomics	10.1186/1471-2164-15-170	2014
	Cloning and nucleotide sequence analysis of pepV, a carnosinase gene from Lactobacillus delbrueckii subsp. lactis DSM 7290, and partial characterization of the enzyme.	Vongerichten KF, Klein JR, Matern H, Plapp R.	Microbiology (Reading)	10.1099/00221287-140-10-2591	1994
Metabolism	Ability of bifidobacteria to metabolize chitin-glucan and its impact on the gut microbiota.	Alessandri G, Milani C, Duranti S, Mancabelli L, Ranjanoro T, Modica S, Carnevali L, Statello R, Bottacini F, Turroni F, Ossiprandi MC, Sgoifo A, van Sinderen D, Ventura M.	Sci Rep	10.1038/s41598-019-42257-z	2019
Pathogenicity	Irinotecan (CPT-11) chemotherapy alters intestinal microbiota in tumour bearing rats.	Lin XB, Dieleman LA, Ketabi A, Bibova I, Sawyer MB, Xue H, Field CJ, Baracos VE, Ganzle MG.	PLoS One	10.1371/journal.pone.0039764	2012
	Occurrence and Diversity of CRISPR-Cas Systems in the Genus Bifidobacterium.	Briner AE, Lugli GA, Milani C, Duranti S, Turroni F, Gueimonde M, Margolles A, van Sinderen D, Ventura M, Barrangou R.	PLoS One	10.1371/journal.pone.0133661	2015
Genetics	Genomic basis for natural product biosynthetic diversity in the actinomycetes.	Nett M, Ikeda H, Moore BS.	Nat Prod Rep	10.1039/b817069j	2009
Genetics	Comparative genomic and phylogenomic analyses of the Bifidobacteriaceae family.	Lugli GA, Milani C, Turroni F, Duranti S, Mancabelli L, Mangifesta M, Ferrario C, Modesto M, Mattarelli P, Jiri K, van Sinderen D, Ventura M.	BMC Genomics	10.1186/s12864-017-3955-4	2017
	The ClgR protein regulates transcription of the clpP operon in Bifidobacterium breve UCC 2003.	Ventura M, Zhang Z, Cronin M, Canchaya C, Kenny JG, Fitzgerald GF, van Sinderen D.	J Bacteriol	10.1128/jb.187.24.8411-8426.2005	2005
Metabolism	Development and characterization of a highly specific and sensitive SYBR green reverse transcriptase PCR assay for detection of the 2009 pandemic H1N1 influenza virus on the basis of sequence signatures.	Medina RA, Rojas M, Tuin A, Huff S, Ferres M, Martinez-Valdebenito C, Godoy P, Garcia-Sastre A, Fofanov Y, SantaLucia J.	J Clin Microbiol	10.1128/jcm.01142-10	2011
Genetics	A Genomic Toolkit for the Mechanistic Dissection of Intractable Human Gut Bacteria.	Bisanz JE, Soto-Perez P, Noecker C, Aksenov AA, Lam KN, Kenney GE, Bess EN, Haiser HJ, Kyaw TS, Yu FB, Rekdal VM, Ha CWY, Devkota S, Balskus EP, Dorrestein PC, Allen-Vercoe E, Turnbaugh PJ.	Cell Host Microbe	10.1016/j.chom.2020.04.006	2020
Metabolism	The influence of milk oligosaccharides on microbiota of infants: opportunities for formulas.	Chichlowski M, German JB, Lebrilla CB, Mills DA.	Annu Rev Food Sci Technol	10.1146/annurev-food-022510-133743	2011
	Genetic characterization of the Bifidobacterium breve UCC 2003 hrcA locus.	Ventura M, Canchaya C, Bernini V, Del Casale A, Dellaglio F, Neviani E, Fitzgerald GF, van Sinderen D.	Appl Environ Microbiol	10.1128/aem.71.12.8998-9007.2005	2005
Genetics	Bifidobacterium asteroides PRL2011 genome analysis reveals clues for colonization of the insect gut.	Bottacini F, Milani C, Turroni F, Sanchez B, Foroni E, Duranti S, Serafini F, Viappiani A, Strati F, Ferrarini A, Delledonne M, Henrissat B, Coutinho P, Fitzgerald GF, Margolles A, van Sinderen D, Ventura M.	PLoS One	10.1371/journal.pone.0044229	2012
Phylogeny	Phylogenetic framework and molecular signatures for the main clades of the phylum Actinobacteria.	Gao B, Gupta RS.	Microbiol Mol Biol Rev	10.1128/mmbr.05011-11	2012
Metabolism	Cellodextrin utilization by bifidobacterium breve UCC2003.	Pokusaeva K, O'Connell-Motherway M, Zomer A, Macsharry J, Fitzgerald GF, van Sinderen D.	Appl Environ Microbiol	10.1128/aem.01786-10	2011
Enzymology	Quantitative real-time PCR assays to identify and quantify fecal Bifidobacterium species in infants receiving a prebiotic infant formula.	Haarman M, Knol J.	Appl Environ Microbiol	10.1128/aem.71.5.2318-2324.2005	2005
Metabolism	Development of a double-crossover markerless gene deletion system in Bifidobacterium longum: functional analysis of the alpha-galactosidase gene for raffinose assimilation.	Hirayama Y, Sakanaka M, Fukuma H, Murayama H, Kano Y, Fukiya S, Yokota A.	Appl Environ Microbiol	10.1128/aem.00588-12	2012
Enzymology	Bifidobacterial diversity in human feces detected by genus-specific PCR and denaturing gradient gel electrophoresis.	Satokari RM, Vaughan EE, Akkermans AD, Saarela M, de Vos WM.	Appl Environ Microbiol	10.1128/aem.67.2.504-513.2001	2001
Metabolism	Transcriptional and functional analysis of oxalyl-coenzyme A (CoA) decarboxylase and formyl-CoA transferase genes from Lactobacillus acidophilus.	Azcarate-Peril MA, Bruno-Barcena JM, Hassan HM, Klaenhammer TR.	Appl Environ Microbiol	10.1128/aem.72.3.1891-1899.2006	2006
Genetics	Genome-Based Taxonomic Classification of the Phylum Actinobacteria.	Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M.	Front Microbiol	10.3389/fmicb.2018.02007	2018
	Occurrence of Listeria spp. in Soft Cheese and Ice Cream: Effect of Probiotic Bifidobacterium spp. on Survival of Listeria monocytogenes in Soft Cheese.	Ewida RM, Hasan WS, Elfaruk MS, Alayouni RR, Hammam ARA, Kamel DG.	Foods	10.3390/foods11213443	2022
	Methionine utilization by bifidobacteria: possible existence of a reverse transsulfuration pathway.	Wada M, Fukiya S, Suzuki A, Matsumoto N, Matsuo M, Yokota A.	Biosci Microbiota Food Health	10.12938/bmfh.2020-031	2021
Metabolism	Identification of plasmalogens in Bifidobacterium longum, but not in Bifidobacterium animalis.	Mawatari S, Sasuga Y, Morisaki T, Okubo M, Emura T, Fujino T.	Sci Rep	10.1038/s41598-019-57309-7	2020
Metabolism	Bile enhances cell surface hydrophobicity and biofilm formation of bifidobacteria.	Ambalam P, Kondepudi KK, Nilsson I, Wadstrom T, Ljungh A.	Appl Biochem Biotechnol	10.1007/s12010-013-0596-1	2014
	Limosilactobacillus reuteri and caffeoylquinic acid synergistically promote adipose browning and ameliorate obesity-associated disorders.	Liu Y, Zhong X, Lin S, Xu H, Liang X, Wang Y, Xu J, Wang K, Guo X, Wang J, Yu M, Li C, Xie C.	Microbiome	10.1186/s40168-022-01430-9	2022
Phylogeny	Rapid discrimination of Bifidobacterium animalis subspecies by matrix-assisted laser desorption ionization-time of flight mass spectrometry.	Ruiz-Moyano S, Tao N, Underwood MA, Mills DA.	Food Microbiol	10.1016/j.fm.2011.12.012	2012
	Determining the metabolic fate of human milk oligosaccharides: it may just be more complex than you think?	Jackson PPJ, Wijeyesekera A, Rastall RA.	Gut Microbiome (Camb)	10.1017/gmb.2022.8	2022
Phylogeny	Characterization of the fecal microbiota differs between age groups in Koreans.	Kook SY, Kim Y, Kang B, Choe YH, Kim YH, Kim S.	Intest Res	10.5217/ir.2018.16.2.246	2018
Metabolism	Variation in consumption of human milk oligosaccharides by infant gut-associated strains of Bifidobacterium breve.	Ruiz-Moyano S, Totten SM, Garrido DA, Smilowitz JT, German JB, Lebrilla CB, Mills DA.	Appl Environ Microbiol	10.1128/aem.01843-13	2013
Phylogeny	Comparison of various molecular methods for rapid differentiation of intestinal bifidobacteria at the species, subspecies and strain level.	Jarocki P, Podlesny M, Komon-Janczara E, Kucharska J, Glibowska A, Targonski Z.	BMC Microbiol	10.1186/s12866-016-0779-3	2016
Enzymology	A new insight into the physiological role of bile salt hydrolase among intestinal bacteria from the genus Bifidobacterium.	Jarocki P, Podlesny M, Glibowski P, Targonski Z.	PLoS One	10.1371/journal.pone.0114379	2014
Enzymology	Genetic diversity of bile salt hydrolases among human intestinal bifidobacteria.	Jarocki P, Targonski Z.	Curr Microbiol	10.1007/s00284-013-0362-1	2013
	Marinated Sea Bream Fillets Enriched with Lactiplantibacillus plantarum and Bifidobacterium animalis subsp. lactis: Brine Optimization and Product Design.	Speranza B, Bevilacqua A, Racioppo A, Campaniello D, Sinigaglia M, Corbo MR	Foods	10.3390/foods10030661	2021
	Adhesion mechanisms of Bifidobacterium animalis subsp. lactis JCM 10602 to dietary fiber.	Taniguchi M, Nambu M, Katakura Y, Yamasaki-Yashiki S	Biosci Microbiota Food Health	10.12938/bmfh.2020-003	2020
	Alginate- and Gelatin-Coated Apple Pieces as Carriers for Bifidobacterium animalis subsp. lactis DSM 10140.	Campaniello D, Bevilacqua A, Speranza B, Sinigaglia M, Corbo MR	Front Microbiol	10.3389/fmicb.2020.566596	2020
	Ultrasound-Attenuated Microorganisms Inoculated in Vegetable Beverages: Effect of Strains, Temperature, Ultrasound and Storage Conditions on the Performances of the Treatment.	Campaniello D, Corbo MR, Speranza B, Sinigaglia M, Bevilacqua A	Microorganisms	10.3390/microorganisms8081219	2020
Metabolism	Functional cream cheese supplemented with Bifidobacterium animalis subsp. lactis DSM 10140 and Lactobacillus reuteri DSM 20016 and prebiotics.	Speranza B, Campaniello D, Monacis N, Bevilacqua A, Sinigaglia M, Corbo MR	Food Microbiol	10.1016/j.fm.2017.11.001	2017
	Gene Replacement and Fluorescent Labeling to Study the Functional Role of Exopolysaccharides in Bifidobacterium animalis subsp. lactis.	Castro-Bravo N, Hidalgo-Cantabrana C, Rodriguez-Carvajal MA, Ruas-Madiedo P, Margolles A	Front Microbiol	10.3389/fmicb.2017.01405	2017
Phylogeny	Diversity of the subspecies Bifidobacterium animalis subsp. lactis.	Bunesova V, Killer J, Javurkova B, Vlkova E, Tejnecky V, Musilova S, Rada V	Anaerobe	10.1016/j.anaerobe.2017.01.006	2017
Metabolism	The different effects of probiotics treatment on Salmonella-induced interleukin-8 response in intestinal epithelia cells via PI3K/Akt and NOD2 expression.	Huang FC, Huang SC	Benef Microbes	10.3920/BM2015.0181	2016
Pathogenicity	In Vitro Activity of Tea Tree Oil Vaginal Suppositories against Candida spp. and Probiotic Vaginal Microbiota.	Di Vito M, Mattarelli P, Modesto M, Girolamo A, Ballardini M, Tamburro A, Meledandri M, Mondello F	Phytother Res	10.1002/ptr.5422	2015
	Bifidobacterium animalis subsp. lactis decreases urinary oxalate excretion in a mouse model of primary hyperoxaluria.	Klimesova K, Whittamore JM, Hatch M	Urolithiasis	10.1007/s00240-014-0728-2	2014
Metabolism	Synergistic antibacterial efficacies of the combination of bovine lactoferrin or its hydrolysate with probiotic secretion in curbing the growth of meticillin-resistant Staphylococcus aureus.	Chen PW, Jheng TT, Shyu CL, Mao FC	J Med Microbiol	10.1099/jmm.0.052639-0	2013
Pathogenicity	Genetic and physiological responses of Bifidobacterium animalis subsp. lactis to hydrogen peroxide stress.	Oberg TS, Ward RE, Steele JL, Broadbent JR	J Bacteriol	10.1128/JB.00279-13	2013
Metabolism	Antimicrobial potential for the combination of bovine lactoferrin or its hydrolysate with lactoferrin-resistant probiotics against foodborne pathogens.	Chen PW, Jheng TT, Shyu CL, Mao FC	J Dairy Sci	10.3168/jds.2012-6112	2013
Pathogenicity	Prebiotic-non-digestible oligosaccharides preference of probiotic bifidobacteria and antimicrobial activity against Clostridium difficile.	Kondepudi KK, Ambalam P, Nilsson I, Wadstrom T, Ljungh A	Anaerobe	10.1016/j.anaerobe.2012.08.005	2012
Genetics	Comparison of the complete genome sequences of Bifidobacterium animalis subsp. lactis DSM 10140 and Bl-04.	Barrangou R, Briczinski EP, Traeger LL, Loquasto JR, Richards M, Horvath P, Coute-Monvoisin AC, Leyer G, Rendulic S, Steele JL, Broadbent JR, Oberg T, Dudley EG, Schuster S, Romero DA, Roberts RF	J Bacteriol	10.1128/JB.00155-09	2009
Metabolism	In vitro kinetic analysis of fermentation of prebiotic inulin-type fructans by Bifidobacterium species reveals four different phenotypes.	Falony G, Lazidou K, Verschaeren A, Weckx S, Maes D, De Vuyst L	Appl Environ Microbiol	10.1128/AEM.01488-08	2008
Pathogenicity	Antibiotic susceptibility patterns and resistance genes of starter cultures and probiotic bacteria used in food.	Kastner S, Perreten V, Bleuler H, Hugenschmidt G, Lacroix C, Meile L	Syst Appl Microbiol	10.1016/j.syapm.2005.07.009	2005
Biotechnology	Use of traditional African fermented beverages as delivery vehicles for Bifidobacterium lactis DSM 10140.	McMaster LD, Kokott SA, Reid SJ, Abratt VR	Int J Food Microbiol	10.1016/j.ijfoodmicro.2004.12.013	2005
Enzymology	Characterization and heterologous expression of the oxalyl coenzyme A decarboxylase gene from Bifidobacterium lactis.	Federici F, Vitali B, Gotti R, Pasca MR, Gobbi S, Peck AB, Brigidi P	Appl Environ Microbiol	10.1128/AEM.70.9.5066-5073.2004	2004
Metabolism	Hydrolysis of oligofructoses by the recombinant beta-fructofuranosidase from Bifidobacterium lactis.	Janer C, Rohr LM, Pelaez C, Laloi M, Cleusix V, Requena T, Meile L	Syst Appl Microbiol	10.1078/0723-2020-00274	2004
Biotechnology	H+-ATPase activity in Bifidobacterium with special reference to acid tolerance.	Matsumoto M, Ohishi H, Benno Y	Int J Food Microbiol	10.1016/j.ijfoodmicro.2003.10.009	2004
Phylogeny	Bifidobacterium lactis DSM 10140: identification of the atp (atpBEFHAGDC) operon and analysis of its genetic structure, characteristics, and phylogeny.	Ventura M, Canchaya C, van Sinderen D, Fitzgerald GF, Zink R	Appl Environ Microbiol	10.1128/AEM.70.5.3110-3121.2004	2004
Enzymology	Identification of the gene for beta-fructofuranosidase of Bifidobacterium lactis DSM10140(T) and characterization of the enzyme expressed in Escherichia coli.	Ehrmann MA, Korakli M, Vogel RF	Curr Microbiol	10.1007/s00284-002-3908-1	2003
Phylogeny	Rapid identification, differentiation, and proposed new taxonomic classification of Bifidobacterium lactis.	Ventura M, Zink R	Appl Environ Microbiol	10.1128/AEM.68.12.6429-6434.2002	2002
Pathogenicity	Multiparametric flow cytometry and cell sorting for the assessment of viable, injured, and dead bifidobacterium cells during bile salt stress.	Amor KB, Breeuwer P, Verbaarschot P, Rombouts FM, Akkermans AD, De Vos WM, Abee T	Appl Environ Microbiol	10.1128/AEM.68.11.5209-5216.2002	2002
Phylogeny	Specific identification and targeted characterization of Bifidobacterium lactis from different environmental isolates by a combined multiplex-PCR approach.	Ventura M, Reniero R, Zink R	Appl Environ Microbiol	10.1128/AEM.67.6.2760-2765.2001	2001
Metabolism	Selection of a Bifidobacterium strain to complement resistant starch in a synbiotic yoghurt.	Crittenden RG, Morris LF, Harvey ML, Tran LT, Mitchell HL, Playne MJ	J Appl Microbiol	10.1046/j.1365-2672.2001.01240.x	2001
Phylogeny	Bifidobacterium lactis Meile et al. 1997 is a subjective synonym of Bifidobacterium animalis (Mitsuoka 1969) Scardovi and Trovatelli 1974.	Cai Y, Matsumoto M, Benno Y	Microbiol Immunol	10.1111/j.1348-0421.2000.tb02568.x	2000
Phylogeny	Bifidobacterium canis sp. nov., a novel member of the Bifidobacterium pseudolongum phylogenetic group isolated from faeces of a dog (Canis lupus f. familiaris).	Neuzil-Bunesova V, Lugli GA, Modrackova N, Makovska M, Mrazek J, Mekadim C, Musilova S, Svobodova I, Spanek R, Ventura M, Killer J	Int J Syst Evol Microbiol	10.1099/ijsem.0.004378	2020
Phylogeny	Polyphasic taxonomic analysis of Bifidobacterium animalis and Bifidobacterium lactis reveals relatedness at the subspecies level: reclassification of Bifidobacterium animalis as Bifidobacterium animalis subsp. animalis subsp. nov. and Bifidobacterium lactis as Bifidobacterium animalis subsp. lactis subsp. nov.	Masco L, Ventura M, Zink R, Huys G, Swings J	Int J Syst Evol Microbiol	10.1099/ijs.0.03011-0	2004

References

#3817	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 10140
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#41576	; Curators of the CIP;
#53994	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 37979
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#120524	Collection of Institut Pasteur ; Curators of the CIP; CIP 105265
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Bifidobacterium animalis subsp. lactis (CCUG 37979, DSM 10140, CIP 105265)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Murein

Metabolite utilization

Enzymes

Fatty acid profile

API zym

API 50CHac

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000022965

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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