[Ref.: #8230] |
Sample type/isolated from |
marine fish |
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[Ref.: #123268] |
Sample type/isolated from |
Animal, Sea fish |
* marker position based on {}
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Isolation sources categories |
#Environmental |
#Aquatic |
#Marine |
#Host |
#Fishes |
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Information on genomic background e.g. entries in nucleic sequence databass
Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
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[Ref.: #8230] |
Vibrio splendidus partial 16S rRNA gene, strain LMG 4042, clone a |
AJ515229 |
1321 |
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29497 tax ID |
[Ref.: #124043] |
Vibrio splendidus strain ATCC 33125 16S ribosomal RNA gene, partial sequence. |
OQ626015 |
1414 |
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29497 tax ID |
* |
[Ref.: #20218] |
V.splendidus (ATCC 33125T) gene for 16S ribosomal RNA |
X74724 |
1468 |
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29497 tax ID |
* |
[Ref.: #20218] |
Vibrio splendidus partial 16S rRNA gene, strain LMG 4042, clone b |
AJ515230 |
1321 |
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29497 tax ID |
* |
[Ref.: #124043] |
Vibrio splendidus strain ATCC 33125 16S ribosomal RNA gene, partial sequence. |
OQ147522 |
1067 |
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29497 tax ID |
* |
[Ref.: #20218] |
Vibrio splendidus strain ATCC 33125 16S-23S ribosomal RNA intergenic spacer, partial sequence |
AF413021 |
394 |
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29497 tax ID |
* |
[Ref.: #20218] |
Vibrio splendidus strain ATCC 33125 16S-23S ribosomal RNA intergenic spacer, partial sequence |
AF413022 |
394 |
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29497 tax ID |
* |
[Ref.: #20218] |
Vibrio splendidus strain ATCC 33125 16S-23S ribosomal RNA intergenic spacer, partial sequence |
AF413023 |
278 |
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29497 tax ID |
* |
[Ref.: #20218] |
Vibrio splendidus strain ATCC 33125 16S-23S ribosomal RNA intergenic spacer, partial sequence |
AF413024 |
448 |
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29497 tax ID |
* |
[Ref.: #124043] |
Vibrio splendidus strain ATCC 33125 16S ribosomal RNA gene, partial sequence. |
OQ625906 |
1349 |
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29497 tax ID |
* |
[Ref.: #124043] |
Vibrio splendidus strain ATCC 33125 16S ribosomal RNA gene, partial sequence. |
OQ625917 |
1379 |
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29497 tax ID |
* |
[Ref.: #124043] |
Vibrio splendidus strain ATCC 33125 16S ribosomal RNA gene, partial sequence. |
OQ625939 |
1042 |
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29497 tax ID |
* |
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Genome sequence information: |
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Availability in culture collections
External links
[Ref.: #8230] |
Culture collection no. |
DSM 19640, ATCC 33125, CECT 528, LMG 4042, NCCB 53037, NCIMB 1, CIP 102893, KCTC 12679 |
[Ref.: #86329] |
SI-ID 5122
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* |
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Literature: |
Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries. |
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Topic |
Title |
Authors |
Journal |
DOI |
Year |
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Genetics |
Draft Genome Sequence of Vibrio splendidus DSM 19640. |
Chibani CM, Poehlein A, Roth O, Liesegang H, Wendling CC |
Genome Announc |
10.1128/genomeA.01368-17 |
2017 |
* |
Phylogeny |
Whole genome sequences reveal Vibrio hemicentroti Kim et al. 2013 as a later heterotypic synonym of Vibrio splendidus (Beijerinck 1900) Baumann et al. 1981. |
Lucena T, Carmen Macian M, Arahal DR, Rodrigo-Torres L, Pujalte MJ |
Int J Syst Evol Microbiol |
10.1099/ijsem.0.001842 |
2017 |
* |
Phylogeny |
A European epidemiological survey of Vibrio splendidus clade shows unexplored diversity and massive exchange of virulence factors. |
Nasfi H, Travers MA, de Lorgeril J, Habib C, Sannie T, Sorieul L, Gerard J, Avarre JC, Haffner P, Tourbiez D, Renault T, Furones D, Roque A, Pruzzo C, Cheslett D, Gdoura R, Vallaeys T |
World J Microbiol Biotechnol |
10.1007/s11274-015-1800-y |
2015 |
* |
Phylogeny |
Historical microbiology: revival and phylogenetic analysis of the luminous bacterial cultures of M. W. Beijerinck. |
Figge MJ, Robertson LA, Ast JC, Dunlap PV |
FEMS Microbiol Ecol |
10.1111/j.1574-6941.2011.01177.x |
2011 |
* |
Phylogeny |
Characterization by numerical taxonomy and ribotyping of Vibrio splendidus biovar I and Vibrio scophthalmi strains associated with turbot cultures. |
Farto R, Montes M, Perez MJ, Nieto TP, Larsen JL, Pedersen K |
J Appl Microbiol |
10.1046/j.1365-2672.1999.00730.x |
1999 |
* |
Phylogeny |
Polyphasic approach to the characterisation of marine luminous bacteria. |
Caccamo D, Di Cello F, Fani R, Gugliandolo C, Maugeri TL |
Res Microbiol |
10.1016/s0923-2508(99)80039-4 |
1999 |
* |
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Pathogenicity of vibrio splendidus strains associated with turbot larvae, scophthalmus maximus |
Gatesoupe FJ, Lambert C, Nicolas JL |
J Appl Microbiol |
10.1046/j.1365-2672.1999.00922.x |
1999 |
* |
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References
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#8230 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 19640
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#40473 |
; Curators of the CIP;
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#68368 |
Automatically annotated from API 20E .
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#68369 |
Automatically annotated from API 20NE .
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#68371 |
Automatically annotated from API 50CH acid .
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#68382 |
Automatically annotated from API zym .
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#86329 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID5122.1 )
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#123268 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 102893
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#124043 |
Isabel Schober, Julia Koblitz:
Data extracted from sequence databases, automatically matched based on designation and taxonomy .
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- * These data were automatically processed and therefore are not curated
Change proposal
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