[Ref.: #15841] |
Sample type/isolated from |
Sea water |
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[Ref.: #121300] |
Sample type/isolated from |
Environment, Seawater enriched with chitin |
* marker position based on {}
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Isolation sources categories |
#Environmental |
#Aquatic |
#Marine |
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Information on genomic background e.g. entries in nucleic sequence databass
Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #15841] |
V.nigripulchritudo (ATCC 27043T) gene for 16S ribosomal RNA |
X74717 |
1434 |
|
1051649 tax ID |
[Ref.: #20218] |
Vibrio nigripulchritudo 16S ribosomal RNA gene, partial sequence |
HM771352 |
1470 |
|
1051649 tax ID |
* |
[Ref.: #20218] |
Vibrio nigripulchritudo DNA, 16S-23S ribosomal RNA intergenic spacer, type G, including tRNA-Glu, strain: ATCC 27043 |
AB515338 |
468 |
|
1051649 tax ID |
* |
[Ref.: #20218] |
Vibrio nigripulchritudo DNA, 16S-23S ribosomal RNA intergenic spacer, type GLV, including tRNA-Glu, tRNA-Lys, tRNA-Val, strain: ATCC 27043 |
AB515339 |
723 |
|
1051649 tax ID |
* |
[Ref.: #20218] |
Vibrio nigripulchritudo DNA, 16S-23S ribosomal RNA intergenic spacer, type GLAV, including tRNA-Glu, tRNA-Lys, tRNA-Ala, tRNA-Val, strain: ATCC 27043 |
AB515340 |
762 |
|
1051649 tax ID |
* |
[Ref.: #20218] |
Vibrio nigripulchritudo 16S rRNA |
D11213 |
218 |
|
1051649 tax ID |
* |
[Ref.: #20218] |
Vibrio nigripulchritudo 16S rRNA |
D11262 |
214 |
|
1051649 tax ID |
* |
[Ref.: #20218] |
Vibrio nigripulchritudo 16S rRNA |
D11311 |
191 |
|
1051649 tax ID |
* |
[Ref.: #20218] |
Vibrio nigripulchritudo DNA, 16S-23S rRNA intergenic spacer and 23S rRNA, partial sequence, strain: ATCC 27043 |
AB255726 |
291 |
|
1051649 tax ID |
* |
[Ref.: #20218] |
Vibrio nigripulchritudo strain ATCC 27043 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Glu gene, complete sequence |
AF413009 |
492 |
|
1051649 tax ID |
* |
[Ref.: #20218] |
Vibrio nigripulchritudo strain ATCC 27043 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Glu and tRNA-Val genes, complete sequence |
AF413010 |
729 |
|
1051649 tax ID |
* |
[Ref.: #20218] |
Vibrio nigripulchritudo strain ATCC 27043 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Glu and tRNA-Val genes, complete sequence |
AF413011 |
766 |
|
1051649 tax ID |
* |
[Ref.: #20218] |
Vibrio nigripulchritudo strain ATCC 27043 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Glu, tRNA-Ala, and tRNA-Val genes, complete sequence |
AF413012 |
800 |
|
1051649 tax ID |
* |
[Ref.: #20218] |
Vibrio nigripulchritudo strain ATCC 27043 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Ala gene, complete sequence |
AF413013 |
472 |
|
1051649 tax ID |
* |
[Ref.: #20218] |
Vibrio nigripulchritudo strain ATCC 27043 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Ala gene, complete sequence |
AF413014 |
474 |
|
1051649 tax ID |
* |
[Ref.: #20218] |
Vibrio nigripulchritudo strain ATCC 27043 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence |
AF413015 |
571 |
|
1051649 tax ID |
* |
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Genome sequence information: |
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|
Sequence accession description |
Seq. accession number |
Assembly level |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #66792] |
Vibrio nigripulchritudo ATCC 27043 |
GCA_000222685 |
contig |
|
1051649 tax ID |
* |
[Ref.: #66792] |
Vibrio nigripulchritudo ATCC 27043 |
1051649.3 |
wgs |
|
1051649 tax ID |
* |
[Ref.: #66792] |
Vibrio nigripulchritudo ATCC 27043 |
2512047078 |
draft |
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1051649 tax ID |
* |
|
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Availability in culture collections
External links
References
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#15841 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 21607
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#35504 |
; Curators of the CIP;
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#66794 |
Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg:
BRENDA, the ELIXIR core data resource in 2021: new developments and updates.
Nucleic Acids Res. 49:
D498 - D508
2020 (
DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
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#68369 |
Automatically annotated from API 20NE .
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#68382 |
Automatically annotated from API zym .
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#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
|
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#86326 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID5108.1 )
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#121300 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 103195
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- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
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