Name: Vibrio campbellii DSM 19270
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 17319

Type strain:

Species: Vibrio campbellii

Culture col. no.: DSM 19270, ATCC 25920, CCM 2582, CCUG 4979, CECT 523, CIP 75.1, LMG 11216, NBRC 15631, NCIMB 1894, NCTC 11317, JCM 1054, BCRC 12909, CAIM 315, CAIM 519, IFO 15631, KCTC 2716, NCCB 73002, NCIMB 1994

Strain history: CIP <- 1975, M. Popoff, Inst. Pasteur, Paris, France <- J.L. Reichelt <- P. Baumann: strain 40, Beneckea campbellii

NCBI tax ID(s): 1224742 (strain), 680 (species)

SI-ID 5056

LMG 11216, ATCC 25920, CCM 2582, CCRC 12909, CCUG 4979, CECT 523, NCIMB 1894, NCMB 1994, NCIMB 1994, IFO 15631, NCTC 11317, LMD 73.2, CIP 75.1, IMET 11296, KCTC 2716, NCCB 73002, NBRC 15631, BCRC 12909, CIP 75.01, DSM 19270

Special Collections

Other strains from Vibrio campbellii

Section

When using BacDive for research please cite our paper

Vibrio campbellii DSM 19270 is a facultative anaerobe, mesophilic, Gram-negative bacterium that was isolated from seawater at 800 m depth.

Gram-negative
motile
rod-shaped
facultative anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	"Vibrionales"
	Family	*Vibrionaceae*
	Genus	*Vibrio*
	Species	**Vibrio campbellii**
	Full Scientific Name (LPSN)	Vibrio campbellii (Baumann et al. 1971) Baumann et al. 1981

Synonym

Beneckea campbellii

Information on morphological and physiological properties Morphology

[Ref.: #117113]	Gram stain	negative
[Ref.: #125438]	Gram stain	negative Confidence in %100
[Ref.: #125439]	Gram stain	negative Confidence in %95.2

[Ref.: #117113]	Cell shape	rod-shaped

[Ref.: #117113]	Motility	yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7989]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #7989]

Culture medium growth

[Ref.: #7989]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7989]

Culture medium composition

expand / minimize

[Ref.: #37619]

Culture medium

Marine agar (MA)

[Ref.: #37619]

Culture medium growth

[Ref.: #37619]

Culture medium composition

expand / minimize

[Ref.: #117113]

Culture medium

CIP Medium 13

[Ref.: #117113]

Culture medium growth

[Ref.: #117113]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #7989]		growth	28 °C
[Ref.: #37619]		growth	25 °C
[Ref.: #67770]		growth	26 °C
[Ref.: #117113]		growth	15-37 °C
[Ref.: #117113]	no	growth	5 °C
[Ref.: #117113]	no	growth	41 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #117113]	Oxygen tolerance	facultative anaerobe
[Ref.: #125439]	Oxygen tolerance	obligate aerobe Confidence in %96.4

[Ref.: #125439]

Ability of spore formation

no Confidence in %95.1

	Salt	Tested relation		Salt conc.
[Ref.: #117113]	NaCl		growth	2-8	%
[Ref.: #117113]	NaCl	no	growth	0	%
[Ref.: #117113]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	adipate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68368]	amygdalin ChEBI	+	fermentation	* from API 20E
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE, API 20E
[Ref.: #117113]	citrate ChEBI	-	carbon source
[Ref.: #68368]	citrate ChEBI	-	assimilation	* from API 20E
[Ref.: #68369]	D-glucose ChEBI	+	fermentation	* from API 20NE, API 20E
[Ref.: #68369]	D-glucose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68368]	D-mannitol ChEBI	+	fermentation	* from API 20E
[Ref.: #68369]	D-mannitol ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-mannose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	decanoate ChEBI	+	assimilation	* from API 20NE
[Ref.: #117113]	esculin ChEBI	-	hydrolysis
[Ref.: #68369]	esculin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	+	hydrolysis	* from API 20NE, API 20E
[Ref.: #68369]	gluconate ChEBI	-	assimilation	* from API 20NE
[Ref.: #117113]	glucose ChEBI	+	fermentation
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68368]	L-arabinose ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	L-rhamnose ChEBI	-	fermentation	* from API 20E
[Ref.: #117113]	lactose ChEBI	+	fermentation
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #68369]	malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	maltose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68368]	melibiose ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	myo-inositol ChEBI	-	fermentation	* from API 20E
[Ref.: #68369]	N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #117113]	nitrate ChEBI	+	reduction
[Ref.: #68369]	nitrate ChEBI	+	reduction	* from API 20NE
[Ref.: #117113]	nitrite ChEBI	-	reduction
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #117113]	sodium thiosulfate ChEBI	-	builds gas from
[Ref.: #68368]	sorbitol ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	sucrose ChEBI	-	fermentation	* from API 20E
[Ref.: #68369]	tryptophan ChEBI	+	energy source	* from API 20NE, API 20E
[Ref.: #68369]	urea ChEBI	-	hydrolysis	* from API 20NE, API 20E
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #117113]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	yes	no

	Metabolite	Production
[Ref.: #117113]	indole ChEBI	no
[Ref.: #68368]	acetoin ChEBI	no	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68369]	indole ChEBI	yes	* from API 20NE, API 20E

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #117113]	acetoin ChEBI	-
[Ref.: #117113]	glucose ChEBI		+
[Ref.: #68368]	acetoin ChEBI	-			* from API 20E
[Ref.: #68369]	indole ChEBI			+	* from API 20NE, API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #117113]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #117113]	amylase	+
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE, API 20E
[Ref.: #117113]	beta-galactosidase	-	3.2.1.23
[Ref.: #68368]	beta-galactosidase	-	3.2.1.23	* from API 20E, API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym, API 20NE
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #117113]	caseinase	+	3.4.21.50
[Ref.: #117113]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68369]	cytochrome oxidase	+	1.9.3.1	* from API 20NE, API 20E
[Ref.: #117113]	DNase	+
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #117113]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #117113]	gelatinase	+/-
[Ref.: #68369]	gelatinase	+		* from API 20NE, API 20E
[Ref.: #117113]	lecithinase	+
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #117113]	lipase	+
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #117113]	lysine decarboxylase	+	4.1.1.18
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #117113]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #117113]	oxidase	+
[Ref.: #117113]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #117113]	protease	+
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #117113]	tryptophan deaminase	-
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #117113]	tween esterase	+
[Ref.: #117113]	urease	-	3.5.1.5
[Ref.: #68369]	urease	-	3.5.1.5	* from API 20NE, API 20E
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #7989]	18291	-	-	-	-	-	-	-	-	+	-	+	+	+	-	-	-	-	-	+	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #7989]	26178	+	+	+	-	-	-	+	-	-	-	-	-	-	-	-	+	-	+	+	-	+

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #117113]	3336	not determinedn.d.	+	+	-	+	+	-	-	-	-	+	+	-	-	-	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	+	+	-	+	-	-	-	+	-	-	+	+	+	+	+	+	-	-	+	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #117113]	13274	-	+	+	+	-	+	-	-	-	+	+	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7989]	Sample type/isolated from	seawater at 800 m depth
[Ref.: #7989]	Geographic location	20.5000°/157.5000°

[Ref.: #44819]	Sample type/isolated from	Marine origin

[Ref.: #67770]	Sample type/isolated from	Seawater

[Ref.: #117113]	Sample type/isolated from	Environment, Seawater at 800m. deep
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence X74692 (>99% sequence identity) for Vibrio from Microbeatlas

Aquatic Samples	3075
Soil Samples	169
Animal Samples	1856
Plant Samples	64
Total Samples	5164

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7989]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #117113]	Biosafety level	2	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7989]	V.campbellii 16S ribosomal RNA	X56575	1485	GenBank ENA	1224742 tax ID
[Ref.: #67770]	Vibrio campbellii gene for 16S rRNA, partial sequence, strain: NBRC 15631	AB680917	1478	GenBank ENA	680 tax ID
[Ref.: #67770]	Vibrio campbellii gene for 16S ribosomal RNA, partial cds, strain: JCM 1054	LC050173	1475	GenBank ENA	680 tax ID
[Ref.: #20218]	Vibrio campbellii 16S rRNA	D11193	217	GenBank ENA	1224742 tax ID	*
[Ref.: #20218]	Vibrio campbellii 16S rRNA	D11242	213	GenBank ENA	1224742 tax ID	*
[Ref.: #20218]	Vibrio campbellii ATCC 25920 16S ribosomal RNA gene, partial sequence	AF426824	745	GenBank ENA	1224742 tax ID	*
[Ref.: #124043]	Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 strain S223 16S ribosomal RNA gene, partial sequence.	OP343775	1352	GenBank ENA	1224742 tax ID	*
[Ref.: #20218]	Vibrio campbellii 16S rRNA	D11291	194	GenBank ENA	680 tax ID	*
[Ref.: #124043]	Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 strain S391 16S ribosomal RNA gene, partial sequence.	OP343939	1374	GenBank ENA	1224742 tax ID	*
[Ref.: #20218]	V.campbelli (ATCC 25920T) gene for 16S ribosomal RNA	X74692	1467	GenBank ENA	1224742 tax ID	*
[Ref.: #124043]	Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 16S ribosomal RNA gene, partial sequence.	OQ147492	499	GenBank ENA	1224742 tax ID	*
[Ref.: #20218]	Vibrio campbellii strain ATCC 25920 16S-23S ribosomal RNA intergenic spacer, partial sequence	AF412990	279	GenBank ENA	1224742 tax ID	*
[Ref.: #20218]	Vibrio campbellii strain ATCC 25920 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence	AF412996	544	GenBank ENA	1224742 tax ID	*
[Ref.: #20218]	Vibrio campbellii strain ATCC 25920 16S-23S ribosomal RNA intergenic spacer, partial sequence	AF412997	278	GenBank ENA	1224742 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920	GCA_000334195	contig	GenBank ENA	1224742 tax ID
[Ref.: #67770]	Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920	GCA_000400345	scaffold	GenBank ENA	1224742 tax ID
[Ref.: #66792]	Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 ATCC 25920, CAIM 519T	GCA_002163755	complete	GenBank ENA	1224742 tax ID	*
[Ref.: #66792]	Vibrio campbellii CAIM 519 = NBRC 15631	1224742.7	wgs	PATRIC	1224742 tax ID	*
[Ref.: #66792]	Vibrio campbellii CAIM 519 = NBRC 15631	1224742.3	wgs	PATRIC	1224742 tax ID	*
[Ref.: #66792]	Vibrio campbellii CAIM 519 = NBRC 15631 strain ATCC 25920, CAIM 519T	1224742.10	complete	PATRIC	1224742 tax ID	*

[Ref.: #7989]	GC-content	44.94 mol%	sequence analysis
[Ref.: #67770]	GC-content	47.2 mol%

Data predicted using genome information as a basis Genome-based predictions

	Model	Trait	Prediction	Confidence in %	In training data
	Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC BAA-1116 NCBI: GCA_000017705.1
[Ref.: #125438]	gram-positive	gram-positiveⓘ	no	100	no
[Ref.: #125438]	anaerobic	anaerobicⓘ	no	97.24	no
[Ref.: #125438]	aerobic	aerobicⓘ	no	66.052	yes
[Ref.: #125438]	spore-forming	spore-formingⓘ	no	85.806	no
[Ref.: #125438]	thermophile	thermophilicⓘ	no	99.5	no
[Ref.: #125438]	motile2+	flagellatedⓘ	yes	88.245	no

	Model	Trait	Prediction	Confidence in %
	Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Vibrio campbellii ATCC BAA-1116 NCBI: GCA_000464435
[Ref.: #125439]	BacteriaNet	oxygen_toleranceⓘ	obligate aerobe	96.4
[Ref.: #125439]	BacteriaNet	gram_stainⓘ	negative	95.2
[Ref.: #125439]	BacteriaNet	motilityⓘ	yes	66.7
[Ref.: #125439]	BacteriaNet	spore_formationⓘ	no	95.1

Availability in culture collections External links

[Ref.: #7989]

Culture collection no.

DSM 19270, ATCC 25920, CCM 2582, CCUG 4979, CECT 523, CIP 75.1, LMG 11216, NBRC 15631, NCIMB 1894, NCTC 11317, JCM 1054, BCRC 12909, CAIM 315, CAIM 519, IFO 15631, KCTC 2716, NCCB 73002, NCIMB 1994

[Ref.: #86319]

SI-ID 5056

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Proteome	Proteome Expression and Survival Strategies of a Proteorhodopsin-Containing Vibrio Strain under Carbon and Nitrogen Limitation.	Gallagher GE, Waldbauer JR	mSystems	10.1128/msystems.01263-21	2022	*
Phylogeny	Diversity in Natural Transformation Frequencies and Regulation across Vibrio Species.	Simpson CA, Podicheti R, Rusch DB, Dalia AB, van Kessel JC	mBio	10.1128/mBio.02788-19	2019	*
Phylogeny	Vibrio ouci sp. nov. and Vibrio aquaticus sp. nov., two marine bacteria isolated from the East China Sea.	Li B, Li Y, Liu R, Xue C, Zhu X, Tian X, Wang X, Liang J, Zheng Y, Zhang XH	Int J Syst Evol Microbiol	10.1099/ijsem.0.003732	2020	*
Genetics	Taxonomic revision of Harveyi clade bacteria (family Vibrionaceae) based on analysis of whole genome sequences.	Urbanczyk H, Ogura Y, Hayashi T	Int J Syst Evol Microbiol	10.1099/ijs.0.051110-0	2013	*
Phylogeny	Usefulness of a real-time PCR platform for G+C content and DNA-DNA hybridization estimations in vibrios.	Moreira APB, Pereira N, Thompson FL	Int J Syst Evol Microbiol	10.1099/ijs.0.023606-0	2010	*
Phylogeny	Vibrio owensii sp. nov., isolated from cultured crustaceans in Australia.	Cano-Gomez A, Goulden EF, Owens L, Hoj L	FEMS Microbiol Lett	10.1111/j.1574-6968.2009.01850.x	2009	*
Phylogeny	Vibrio hangzhouensis sp. nov., isolated from sediment of the East China Sea.	Xu XW, Wu YH, Wang CS, Oren A, Wu M	Int J Syst Evol Microbiol	10.1099/ijs.0.008698-0	2009	*
Enzymology	Analysis of a gene (vch) encoding hemolysin isolated and sequenced from Vibrio campbellii.	San Luis BB, Hedreyda CT	J Gen Appl Microbiol	10.2323/jgam.52.303	2006	*
Enzymology	Differential detection of vibrios pathogenic to shrimp by multiplex PCR.	Castroverde CD, San Luis BB, Monsalud RG, Hedreyda CT	J Gen Appl Microbiol	10.2323/jgam.52.273	2006	*

References

#7989

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19270

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#37619 ; Curators of the CIP;
#44819 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 4979

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68369

Automatically annotated from API 20NE .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#86319

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID5056.1 )

#117113 Collection of Institut Pasteur ; Curators of the CIP; CIP 75.1

#124043

Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

#125438

Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )

#125439

Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

* These data were automatically processed and therefore are not curated

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Search for species Vibrio campbellii in external resources:
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Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC BAA-1116

Vibrio campbellii ATCC BAA-1116

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