Vibrio campbellii DSM 19270 is a facultative anaerobe, mesophilic, Gram-negative prokaryote that was isolated from seawater at 800 m depth.
Gram-negative motile rod-shaped facultative anaerobe mesophilic genome sequence 16S sequence| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order "Vibrionales" |
| Family Vibrionaceae |
| Genus Vibrio |
| Species Vibrio campbellii |
| Full scientific name Vibrio campbellii (Baumann et al. 1971) Baumann et al. 1981 |
| Synonyms (1) |
| BacDive ID | Other strains from Vibrio campbellii (3) | Type strain |
|---|---|---|
| 135172 | V. campbellii CIP 70.67 | |
| 143021 | V. campbellii CCUG 16330, ATCC 25921 | |
| 175216 | V. campbellii DS40M4, DSM 112538 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 7989 | BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) | Medium recipe at MediaDive | Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water | ||
| 37619 | Marine agar (MA) | Distilled water make up to (1000.000 ml);Marine agar (55.100 g) | |||
| 117113 | CIP Medium 13 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 95.1 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68369 | 17128 ChEBI | adipate | - | assimilation | from API 20NE |
| 68368 | 27613 ChEBI | amygdalin | + | fermentation | from API 20E |
| 68369 | 29016 ChEBI | arginine | - | hydrolysis | from API 20NE |
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 117113 | 16947 ChEBI | citrate | - | carbon source | |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68369 | 17634 ChEBI | D-glucose | - | assimilation | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | + | fermentation | from API 20NE |
| 68368 | 17634 ChEBI | D-glucose | + | fermentation | from API 20E |
| 68369 | 16899 ChEBI | D-mannitol | - | assimilation | from API 20NE |
| 68368 | 16899 ChEBI | D-mannitol | + | fermentation | from API 20E |
| 68369 | 16024 ChEBI | D-mannose | - | assimilation | from API 20NE |
| 68369 | 27689 ChEBI | decanoate | + | assimilation | from API 20NE |
| 117113 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68369 | 4853 ChEBI | esculin | - | hydrolysis | from API 20NE |
| 68369 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20NE |
| 68368 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20E |
| 68369 | 24265 ChEBI | gluconate | - | assimilation | from API 20NE |
| 117113 | 17234 ChEBI | glucose | + | fermentation | |
| 68369 | 30849 ChEBI | L-arabinose | - | assimilation | from API 20NE |
| 68368 | 30849 ChEBI | L-arabinose | - | fermentation | from API 20E |
| 68368 | 62345 ChEBI | L-rhamnose | - | fermentation | from API 20E |
| 117113 | 17716 ChEBI | lactose | + | fermentation | |
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 68369 | 25115 ChEBI | malate | + | assimilation | from API 20NE |
| 68369 | 17306 ChEBI | maltose | - | assimilation | from API 20NE |
| 68368 | 28053 ChEBI | melibiose | - | fermentation | from API 20E |
| 68368 | 17268 ChEBI | myo-inositol | - | fermentation | from API 20E |
| 68369 | 59640 ChEBI | N-acetylglucosamine | - | assimilation | from API 20NE |
| 117113 | 17632 ChEBI | nitrate | + | reduction | |
| 68369 | 17632 ChEBI | nitrate | + | reduction | from API 20NE |
| 117113 | 16301 ChEBI | nitrite | - | reduction | |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 117113 | 132112 ChEBI | sodium thiosulfate | - | builds gas from | |
| 68368 | 30911 ChEBI | sorbitol | - | fermentation | from API 20E |
| 68368 | 17992 ChEBI | sucrose | - | fermentation | from API 20E |
| 68369 | 27897 ChEBI | tryptophan | + | energy source | from API 20NE |
| 68368 | 27897 ChEBI | tryptophan | + | energy source | from API 20E |
| 68369 | 16199 ChEBI | urea | - | hydrolysis | from API 20NE |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 117113 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 117113 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | + | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 117113 | amylase | + | ||
| 68369 | arginine dihydrolase | - | 3.5.3.6 | from API 20NE |
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 117113 | beta-galactosidase | - | 3.2.1.23 | |
| 68368 | beta-galactosidase | - | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68369 | beta-glucosidase | - | 3.2.1.21 | from API 20NE |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 117113 | caseinase | + | 3.4.21.50 | |
| 117113 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68369 | cytochrome oxidase | + | 1.9.3.1 | from API 20NE |
| 68368 | cytochrome oxidase | + | 1.9.3.1 | from API 20E |
| 117113 | DNase | + | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 117113 | gamma-glutamyltransferase | - | 2.3.2.2 | |
| 117113 | gelatinase | +/- | ||
| 68369 | gelatinase | + | from API 20NE | |
| 68368 | gelatinase | + | from API 20E | |
| 117113 | lecithinase | + | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 117113 | lipase | + | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 117113 | lysine decarboxylase | + | 4.1.1.18 | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 117113 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 117113 | oxidase | + | ||
| 117113 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 117113 | protease | + | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 117113 | tryptophan deaminase | - | ||
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 117113 | tween esterase | + | ||
| 117113 | urease | - | 3.5.1.5 | |
| 68369 | urease | - | 3.5.1.5 | from API 20NE |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | - | from API zym |
| @ref | ONPG | ADH (Arg) | LDC (Lys) | ODC | CIT | H2S productionH2S | URE | TDA (Trp) | IND | Acetoin production (Voges Proskauer test)VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX | Nitrite productionNO2 | Reduction to N2N2 | MotilityMOB | Growth on MacConkey mediumMAC | OF-O | OF-F | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7989 | - | - | - | - | - | - | - | - | + | - | + | + | + | - | - | - | - | - | + | - | + | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. |
Global distribution of 16S sequence X74692 (>99% sequence identity) for Vibrio from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM1770v1 assembly for Vibrio campbellii ATCC BAA-1116 ATCC BAA-1116; BB120 | complete | 2902295 | 98.99 | ||||
| 66792 | ASM46443v1 assembly for Vibrio campbellii ATCC BAA-1116 | complete | 2902295 | 98.33 | ||||
| 66792 | ASM216375v1 assembly for Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 ATCC 25920, CAIM 519T | complete | 1224742 | 98.21 | ||||
| 67770 | Vc-CAIM519 assembly for Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 | contig | 1224742 | 35.25 | ||||
| 67770 | ASM40034v1 assembly for Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 | scaffold | 1224742 | 1.32 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Vibrio campbellii strain ATCC 25920 16S-23S ribosomal RNA intergenic spacer, partial sequence | AF412990 | 279 | 1224742 | ||
| 20218 | Vibrio campbellii strain ATCC 25920 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence | AF412996 | 544 | 1224742 | ||
| 20218 | Vibrio campbellii strain ATCC 25920 16S-23S ribosomal RNA intergenic spacer, partial sequence | AF412997 | 278 | 1224742 | ||
| 20218 | Vibrio campbellii ATCC 25920 16S ribosomal RNA gene, partial sequence | AF426824 | 745 | 1224742 | ||
| 20218 | Vibrio campbellii 16S rRNA | D11193 | 217 | 1224742 | ||
| 20218 | Vibrio campbellii 16S rRNA | D11242 | 213 | 1224742 | ||
| 20218 | Vibrio campbellii 16S rRNA | D11291 | 194 | 680 | ||
| 20218 | V.campbelli (ATCC 25920T) gene for 16S ribosomal RNA | X74692 | 1467 | 1224742 | ||
| 7989 | V.campbellii 16S ribosomal RNA | X56575 | 1485 | 1224742 | ||
| 67770 | Vibrio campbellii gene for 16S rRNA, partial sequence, strain: NBRC 15631 | AB680917 | 1478 | 680 | ||
| 67770 | Vibrio campbellii gene for 16S ribosomal RNA, partial cds, strain: JCM 1054 | LC050173 | 1475 | 680 | ||
| 124043 | Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 strain S223 16S ribosomal RNA gene, partial sequence. | OP343775 | 1352 | 1224742 | ||
| 124043 | Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 strain S391 16S ribosomal RNA gene, partial sequence. | OP343939 | 1374 | 1224742 | ||
| 124043 | Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 16S ribosomal RNA gene, partial sequence. | OQ147492 | 499 | 1224742 | ||
| 124043 | Vibrio campbellii strain DSM 19270 16S ribosomal RNA gene, partial sequence. | MH315814 | 1444 | 680 | ||
| 124043 | Vibrio campbellii strain DSM 19270 16S ribosomal RNA gene, partial sequence. | MH315872 | 570 | 680 | ||
| 124043 | Vibrio campbellii CAIM 519 = NBRC 15631 strain ATCC 25920 16S ribosomal RNA gene, partial sequence. | MK417957 | 737 | 1224742 | ||
| 124043 | Vibrio campbellii CAIM 519 = NBRC 15631 16S ribosomal RNA gene, partial sequence. | MW198181 | 601 | 1224742 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 96.40 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 95.20 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 66.70 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 95.10 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 100.00 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 97.24 | no |
| 125438 | aerobic | aerobicⓘ | no | 66.05 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 85.81 | no |
| 125438 | thermophilic | thermophileⓘ | no | 99.50 | no |
| 125438 | flagellated | motile2+ⓘ | yes | 88.25 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Effects of vitamin B12 supply on cellular processes of the facultative vitamin B12 consumer Vibrio campbellii. | Groon L-A, Bruns S, Dlugosch L, Wilkes H, Wienhausen G. | Appl Environ Microbiol | 10.1128/aem.01422-24 | 2025 | ||
| The overlooked role of a biotin precursor for marine bacteria - desthiobiotin as an escape route for biotin auxotrophy. | Wienhausen G, Bruns S, Sultana S, Dlugosch L, Groon LA, Wilkes H, Simon M. | ISME J | 10.1038/s41396-022-01304-w | 2022 | ||
| A Novel Vibriophage vB_VcaS_HC Containing Lysogeny-Related Gene Has Strong Lytic Ability against Pathogenic Bacteria. | Li C, Wang Z, Zhao J, Wang L, Xie G, Huang J, Zhang Y. | Virol Sin | 10.1007/s12250-020-00271-w | 2021 | ||
| Genetics | Comparative Genomic Analysis of Virulent Vibrio (Listonella) anguillarum Serotypes Revealed Genetic Diversity and Genomic Signatures in the O-Antigen Biosynthesis Gene Cluster. | Machimbirike VI, Vasquez I, Cao T, Chukwu-Osazuwa J, Onireti O, Segovia C, Khunrae P, Rattanarojpong T, Booman M, Jones S, Soto-Davila M, Dixon B, Santander J. | Microorganisms | 10.3390/microorganisms11030792 | 2023 | |
| Metabolism | Amino acid divergence in the ligand-binding pocket of Vibrio LuxR/HapR proteins determines the efficacy of thiophenesulfonamide inhibitors. | Newman JD, Chopra J, Shah P, Shi E, McFadden ME, Horness RE, Brown LC, van Kessel JC. | Mol Microbiol | 10.1111/mmi.14804 | 2021 | |
| Enzymology | Marine Bacteriophages as Next-Generation Therapeutics: Insights into Antimicrobial Potential and Application. | Banicod RJS, Javaid A, Tabassum N, Jo DM, Hassan MI, Kim YM, Khan F. | Viruses | 10.3390/v17070971 | 2025 | |
| Use and Evaluation of a pES213-Derived Plasmid for the Constitutive Expression of gfp Protein in Pathogenic Vibrios: a Tagging Tool for In Vitro Studies. | Norfolk WA, Lipp EK. | Microbiol Spectr | 10.1128/spectrum.02490-22 | 2023 | ||
| Comparative genomic analyses identify the Vibrio harveyi genome sequenced strains BAA-1116 and HY01 as Vibrio campbellii. | Lin B, Wang Z, Malanoski AP, O'Grady EA, Wimpee CF, Vuddhakul V, Alves N, Thompson FL, Gomez-Gil B, Vora GJ. | Environ Microbiol Rep | 10.1111/j.1758-2229.2009.00100.x | 2010 | ||
| Metabolism | Function and regulation of Vibrio campbellii proteorhodopsin: acquired phototrophy in a classical organoheterotroph. | Wang Z, O'Shaughnessy TJ, Soto CM, Rahbar AM, Robertson KL, Lebedev N, Vora GJ. | PLoS One | 10.1371/journal.pone.0038749 | 2012 | |
| Phylogeny | Genomic and functional analysis of Vibrio phage SIO-2 reveals novel insights into ecology and evolution of marine siphoviruses. | Baudoux AC, Hendrix RW, Lander GC, Bailly X, Podell S, Paillard C, Johnson JE, Potter CS, Carragher B, Azam F. | Environ Microbiol | 10.1111/j.1462-2920.2011.02685.x | 2012 | |
| Metabolism | Viscosity dictates metabolic activity of Vibrio ruber. | Boric M, Danevcic T, Stopar D. | Front Microbiol | 10.3389/fmicb.2012.00255 | 2012 | |
| Metabolism | The anguibactin biosynthesis and transport genes are encoded in the chromosome of Vibrio harveyi: a possible evolutionary origin for the pJM1 plasmid-encoded system of Vibrio anguillarum? | Naka H, Actis LA, Crosa JH. | Microbiologyopen | 10.1002/mbo3.65 | 2013 | |
| An improved detection and quantification method for the coral pathogen Vibrio coralliilyticus. | Wilson B, Muirhead A, Bazanella M, Huete-Stauffer C, Vezzulli L, Bourne DG. | PLoS One | 10.1371/journal.pone.0081800 | 2013 | ||
| Enzymology | Simultaneous detection of marine fish pathogens by using multiplex PCR and a DNA microarray. | Gonzalez SF, Krug MJ, Nielsen ME, Santos Y, Call DR. | J Clin Microbiol | 10.1128/jcm.42.4.1414-1419.2004 | 2004 | |
| Enzymology | PCR detection of a newly emerged pandemic Vibrio parahaemolyticus O3:K6 pathogen in pure cultures and seeded waters from the Gulf of Mexico. | Myers ML, Panicker G, Bej AK. | Appl Environ Microbiol | 10.1128/aem.69.4.2194-2200.2003 | 2003 | |
| Enzymology | Rapid detection and identification of Vibrio anguillarum by using a specific oligonucleotide probe complementary to 16S rRNA. | Martinez-Picado J, Blanch AR, Jofre J. | Appl Environ Microbiol | 10.1128/aem.60.2.732-737.1994 | 1994 | |
| Correlation between Possession of a Respiration-Dependent Na Pump and Na Requirement for Growth of Marine Bacteria. | Oh S, Kogure K, Ohwada K, Simidu U. | Appl Environ Microbiol | 10.1128/aem.57.6.1844-1846.1991 | 1991 | ||
| Cultivation | A medium for presumptive identification of Vibrio anguillarum. | Alsina M, Martinez-Picado J, Jofre J, Blanch AR. | Appl Environ Microbiol | 10.1128/aem.60.5.1681-1683.1994 | 1994 | |
| Biodiversity among luminescent symbionts from squid of the genera Uroteuthis, Loliolus and Euprymna (Mollusca: Cephalopoda). | Guerrero-Ferreira RC, Nishiguchi MK. | Cladistics | 10.1111/j.1096-0031.2007.00155.x | 2007 | ||
| Phylogeny | Analysis of gyrB and toxR gene sequences of Vibrio hollisae and development of gyrB- and toxR-targeted PCR methods for isolation of V. hollisae from the environment and its identification. | Vuddhakul V, Nakai T, Matsumoto C, Oh T, Nishino T, Chen CH, Nishibuchi M, Okuda J. | Appl Environ Microbiol | 10.1128/aem.66.8.3506-3514.2000 | 2000 | |
| Metabolism | Detection of Vibrio parahaemolyticus in shellfish by use of multiplexed real-time PCR with TaqMan fluorescent probes. | Ward LN, Bej AK. | Appl Environ Microbiol | 10.1128/aem.72.3.2031-2042.2006 | 2006 | |
| Enzymology | Sequence of a cloned pR72H fragment and its use for detection of Vibrio parahaemolyticus in shellfish with the PCR. | Lee CY, Pan SF, Chen CH. | Appl Environ Microbiol | 10.1128/aem.61.4.1311-1317.1995 | 1995 | |
| Enzymology | Vibrio furnissii (formerly aerogenic biogroup of Vibrio fluvialis), a new species isolated from human feces and the environment. | Brenner DJ, Hickman-Brenner FW, Lee JV, Steigerwalt AG, Fanning GR, Hollis DG, Farmer JJ, Weaver RE, Joseph SW, Seidler RJ. | J Clin Microbiol | 10.1128/jcm.18.4.816-824.1983 | 1983 | |
| Two virulent Vibrio campbellii phages with potential for phage therapy in aquaculture. | Ding H, Shi K, Hsiao M, Li W, Liu X, Xu J, Yang Y, Zhang R. | BMC Microbiol | 10.1186/s12866-025-03803-0 | 2025 | ||
| Rapid Identification of Vibrio Species of the Harveyi Clade Using MALDI-TOF MS Profiling With Main Spectral Profile Database Implemented With an In-House Database: Luvibase. | Mougin J, Flahaut C, Roquigny R, Bonnin-Jusserand M, Grard T, Le Bris C. | Front Microbiol | 10.3389/fmicb.2020.586536 | 2020 | ||
| Genomic analysis of Vibrio harveyi strain PH1009, a potential multi-drug resistant pathogen due to acquisition of toxin genes. | De Mesa CA, Mendoza RM, Penir SMU, de la Pena LD, Amar EC, Saloma CP. | Heliyon | 10.1016/j.heliyon.2023.e14926 | 2023 | ||
| Genetics | Comparative genomics of Vibrio campbellii strains and core species of the Vibrio Harveyi clade. | Ke HM, Prachumwat A, Yu CP, Yang YT, Promsri S, Liu KF, Lo CF, Lu MJ, Lai MC, Tsai IJ, Li WH. | Sci Rep | 10.1038/srep41394 | 2017 | |
| Genetics | A Novel Benthic Phage Infecting Shewanella with Strong Replication Ability. | Wang Z, Zhao J, Wang L, Li C, Liu J, Zhang L, Zhang Y. | Viruses | 10.3390/v11111081 | 2019 | |
| Development of Nitrogen Recycling Strategies for Bioregenerative Life Support Systems in Space. | Verbeelen T, Leys N, Ganigue R, Mastroleo F. | Front Microbiol | 10.3389/fmicb.2021.700810 | 2021 | ||
| Enhanced control of pathogenic Vibrio spp. in aquaculture using phages capable of disrupting biofilms outside their host range. | Wang N, Li C, Zhao J, Yue Y, Shi T, Wang Z, Liang Y, Zhang Y, Wang M. | Appl Environ Microbiol | 10.1128/aem.01673-25 | 2025 | ||
| Genetics | Recovering high-quality bacterial genomes from cross-contaminated cultures: a case study of marine Vibrio campbellii. | Orel N, Fadeev E, Herndl GJ, Turk V, Tinta T. | BMC Genomics | 10.1186/s12864-024-10062-2 | 2024 | |
| Bacterial NLR-related proteins protect against phage. | Kibby EM, Conte AN, Burroughs AM, Nagy TA, Vargas JA, Whalen LA, Aravind L, Whiteley AT. | Cell | 10.1016/j.cell.2023.04.015 | 2023 | ||
| Genetics | Comparative Genomics of Marine Bacteria from a Historically Defined Plastic Biodegradation Consortium with the Capacity to Biodegrade Polyhydroxyalkanoates. | Vogel FA, Schlundt C, Stote RE, Ratto JA, Amaral-Zettler LA. | Microorganisms | 10.3390/microorganisms9010186 | 2021 | |
| Proteome | Proteome Expression and Survival Strategies of a Proteorhodopsin-Containing Vibrio Strain under Carbon and Nitrogen Limitation. | Gallagher GE, Waldbauer JR | mSystems | 10.1128/msystems.01263-21 | 2022 | |
| Phylogeny | Diversity in Natural Transformation Frequencies and Regulation across Vibrio Species. | Simpson CA, Podicheti R, Rusch DB, Dalia AB, van Kessel JC | mBio | 10.1128/mBio.02788-19 | 2019 | |
| Genetics | Taxonomic revision of Harveyi clade bacteria (family Vibrionaceae) based on analysis of whole genome sequences. | Urbanczyk H, Ogura Y, Hayashi T | Int J Syst Evol Microbiol | 10.1099/ijs.0.051110-0 | 2013 | |
| Phylogeny | Usefulness of a real-time PCR platform for G+C content and DNA-DNA hybridization estimations in vibrios. | Moreira APB, Pereira N, Thompson FL | Int J Syst Evol Microbiol | 10.1099/ijs.0.023606-0 | 2010 | |
| Enzymology | Analysis of a gene (vch) encoding hemolysin isolated and sequenced from Vibrio campbellii. | San Luis BB, Hedreyda CT | J Gen Appl Microbiol | 10.2323/jgam.52.303 | 2006 | |
| Enzymology | Differential detection of vibrios pathogenic to shrimp by multiplex PCR. | Castroverde CD, San Luis BB, Monsalud RG, Hedreyda CT | J Gen Appl Microbiol | 10.2323/jgam.52.273 | 2006 | |
| Phylogeny | Vibrio plantisponsor sp. nov., a diazotrophic bacterium isolated from a mangrove associated wild rice (Porteresia coarctata Tateoka). | Rameshkumar N, Gomez-Gil B, Sproer C, Lang E, Dinesh Kumar N, Krishnamurthi S, Nair S, Roque A. | Syst Appl Microbiol | 10.1016/j.syapm.2011.02.005 | 2011 | |
| Phylogeny | Vibrio variabilis sp. nov. and Vibrio maritimus sp. nov., isolated from Palythoa caribaeorum. | Chimetto LA, Cleenwerck I, Moreira APB, Brocchi M, Willems A, De Vos P, Thompson FL. | Int J Syst Evol Microbiol | 10.1099/ijs.0.026997-0 | 2011 | |
| Phylogeny | Vibrio ouci sp. nov. and Vibrio aquaticus sp. nov., two marine bacteria isolated from the East China Sea. | Li B, Li Y, Liu R, Xue C, Zhu X, Tian X, Wang X, Liang J, Zheng Y, Zhang XH | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003732 | 2020 | |
| Phylogeny | Vibrio owensii sp. nov., isolated from cultured crustaceans in Australia. | Cano-Gomez A, Goulden EF, Owens L, Hoj L | FEMS Microbiol Lett | 10.1111/j.1574-6968.2009.01850.x | 2009 | |
| Phylogeny | Vibrio hangzhouensis sp. nov., isolated from sediment of the East China Sea. | Xu XW, Wu YH, Wang CS, Oren A, Wu M | Int J Syst Evol Microbiol | 10.1099/ijs.0.008698-0 | 2009 |
| #7989 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19270 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #37619 | ; Curators of the CIP; |
| #44819 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 4979 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68368 | Automatically annotated from API 20E . |
| #68369 | Automatically annotated from API 20NE . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #117113 | Collection of Institut Pasteur ; Curators of the CIP; CIP 75.1 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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https://doi.org/10.13145/bacdive17319.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data