Vibrio hispanicus TW 79 is an aerobe, mesophilic, Gram-negative prokaryote that was isolated from Artemia spp. .
Gram-negative motile rod-shaped aerobe mesophilic 16S sequence| @ref 20215 |
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| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order "Vibrionales" |
| Family Vibrionaceae |
| Genus Vibrio |
| Species Vibrio hispanicus |
| Full scientific name Vibrio hispanicus Gomez-Gil et al. 2004 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 6514 | REACTIVATION WITH LIQUID MEDIUM (DSMZ Medium 535b) | Medium recipe at MediaDive | Name: REACTIVATION WITH LIQUID MEDIUM (DSMZ Medium 535b) Composition: Trypticase soy broth 30.0 g/l Casein peptone 17.0 g/l Agar 15.0 g/l NaCl 5.0 g/l Soy peptone 3.0 g/l K2HPO4 2.5 g/l D(+)-Glucose 2.5 g/l Distilled water | ||
| 6514 | REACTIVATION WITH TRYPTONE SOYA BROTH (DSMZ Medium 220a) | Medium recipe at MediaDive | Name: REACTIVATION WITH TRYPTONE SOYA BROTH (DSMZ Medium 220a) Composition: Casein peptone 17.0 g/l Agar 15.0 g/l NaCl 5.0 g/l Soy peptone 3.0 g/l D(+)-Glucose 2.5 g/l K2HPO4 2.5 g/l Distilled water | ||
| 32914 | MEDIUM 326 - for Cellulophaga baltica | Distilled water make up to (1000.000 ml);Sodium chloride (20.000 g);Tryptic soy agar (40.000 g) | |||
| 119922 | CIP Medium 326 | Medium recipe at CIP |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 29976 | 37054 ChEBI | 3-hydroxybutyrate | + | carbon source | |
| 68369 | 17128 ChEBI | adipate | - | assimilation | from API 20NE |
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68369 | 29016 ChEBI | arginine | - | hydrolysis | from API 20NE |
| 29976 | 22653 ChEBI | asparagine | + | carbon source | |
| 29976 | 35391 ChEBI | aspartate | + | carbon source | |
| 29976 | 17057 ChEBI | cellobiose | + | carbon source | |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 119922 | 16947 ChEBI | citrate | - | carbon source | |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68369 | 17634 ChEBI | D-glucose | + | assimilation | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | + | fermentation | from API 20NE |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68369 | 16899 ChEBI | D-mannitol | + | assimilation | from API 20NE |
| 68369 | 16024 ChEBI | D-mannose | + | assimilation | from API 20NE |
| 68371 | 16988 ChEBI | D-ribose | - | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68369 | 27689 ChEBI | decanoate | - | assimilation | from API 20NE |
| 29976 | 23652 ChEBI | dextrin | + | carbon source | |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 119922 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68371 | 4853 ChEBI | esculin | + | builds acid from | from API 50CH acid |
| 68369 | 4853 ChEBI | esculin | + | hydrolysis | from API 20NE |
| 29976 | 28757 ChEBI | fructose | + | carbon source | |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 29976 | 28260 ChEBI | galactose | + | carbon source | |
| 68369 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20NE |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 29976 | 24265 ChEBI | gluconate | + | carbon source | |
| 68369 | 24265 ChEBI | gluconate | + | assimilation | from API 20NE |
| 29976 | 5417 ChEBI | glucosamine | + | carbon source | |
| 29976 | 17234 ChEBI | glucose | + | carbon source | |
| 119922 | 17234 ChEBI | glucose | + | fermentation | |
| 29976 | 29987 ChEBI | glutamate | + | carbon source | |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 29976 | 17596 ChEBI | inosine | + | carbon source | |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68369 | 30849 ChEBI | L-arabinose | + | assimilation | from API 20NE |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 29976 | 24996 ChEBI | lactate | + | carbon source | |
| 119922 | 17716 ChEBI | lactose | - | fermentation | |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 68369 | 25115 ChEBI | malate | + | assimilation | from API 20NE |
| 29976 | 17306 ChEBI | maltose | + | carbon source | |
| 68369 | 17306 ChEBI | maltose | + | assimilation | from API 20NE |
| 29976 | 29864 ChEBI | mannitol | + | carbon source | |
| 29976 | 37684 ChEBI | mannose | + | carbon source | |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 29976 | 37657 ChEBI | methyl D-glucoside | + | carbon source | |
| 29976 | 51850 ChEBI | methyl pyruvate | + | carbon source | |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68369 | 59640 ChEBI | N-acetylglucosamine | + | assimilation | from API 20NE |
| 119922 | 17632 ChEBI | nitrate | + | reduction | |
| 68369 | 17632 ChEBI | nitrate | + | reduction | from API 20NE |
| 119922 | 16301 ChEBI | nitrite | - | reduction | |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 29976 | 16634 ChEBI | raffinose | + | carbon source | |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 29976 | 26546 ChEBI | rhamnose | + | carbon source | |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 29976 | 17822 ChEBI | serine | + | carbon source | |
| 119922 | 132112 ChEBI | sodium thiosulfate | - | builds gas from | |
| 29976 | 17992 ChEBI | sucrose | + | carbon source | |
| 29976 | 17748 ChEBI | thymidine | + | carbon source | |
| 29976 | 27082 ChEBI | trehalose | + | carbon source | |
| 68369 | 27897 ChEBI | tryptophan | + | energy source | from API 20NE |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 68369 | 16199 ChEBI | urea | - | hydrolysis | from API 20NE |
| 29976 | 16704 ChEBI | uridine | + | carbon source | |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 119922 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 119922 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 29976 | alpha-galactosidase | + | 3.2.1.22 | |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 119922 | amylase | + | ||
| 68369 | arginine dihydrolase | - | 3.5.3.6 | from API 20NE |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 119922 | beta-galactosidase | + | 3.2.1.23 | |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68369 | beta-glucosidase | + | 3.2.1.21 | from API 20NE |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 119922 | caseinase | + | 3.4.21.50 | |
| 119922 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 29976 | cytochrome oxidase | + | 1.9.3.1 | |
| 68369 | cytochrome oxidase | + | 1.9.3.1 | from API 20NE |
| 119922 | DNase | - | ||
| 68382 | esterase (C 4) | - | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 119922 | gamma-glutamyltransferase | - | 2.3.2.2 | |
| 119922 | gelatinase | - | ||
| 68369 | gelatinase | - | from API 20NE | |
| 119922 | lecithinase | - | ||
| 68382 | leucine arylamidase | - | 3.4.11.1 | from API zym |
| 119922 | lipase | - | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 119922 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 119922 | ornithine decarboxylase | - | 4.1.1.17 | |
| 119922 | oxidase | + | ||
| 119922 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 119922 | protease | + | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 119922 | tryptophan deaminase | - | ||
| 119922 | tween esterase | - | ||
| 119922 | urease | - | 3.5.1.5 | |
| 68369 | urease | - | 3.5.1.5 | from API 20NE |
| 68382 | valine arylamidase | - | from API zym |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119922 | not determinedn.d. | - | - | - | - | - | +/- | - | - | - | +/- | +/- | +/- | +/- | - | +/- | - | - | +/- | - | - | - | +/- | - | - | + | +/- | - | +/- | - | - | +/- | +/- | - | - | - | +/- | - | - | - | - | - | - | - | - | - | - | +/- | - | - |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Vibrio sp. LMG 13240 16S rRNA gene, strain LMG 13240 | AJ316178 | 1468 | 170658 | ||
| 6514 | Vibrio hispanicus strain LMG 13240 clone 1 16S ribosomal RNA gene, partial sequence | AY254039 | 1516 | 224312 | ||
| 6514 | Vibrio hispanicus strain LMG 13240 clone 2 16S ribosomal RNA gene, partial sequence | AY254040 | 1517 | 224312 | ||
| 124043 | Vibrio hispanicus strain CAIM 525 16S ribosomal RNA gene, partial sequence. | MT757985 | 1357 | 224312 | ||
| 124043 | Vibrio hispanicus strain CAIM 525 16S ribosomal RNA gene, partial sequence. | MT759933 | 1354 | 224312 | ||
| 124043 | Vibrio hispanicus strain LMG 13240 16S ribosomal RNA gene, partial sequence. | MG722662 | 401 | 224312 |
| 29976 | GC-content (mol%)42.8 |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Vibrio oceanisediminis sp. nov., a nitrogen-fixing bacterium isolated from an artificial oil-spill marine sediment. | Kang SR, Srinivasan S, Lee SS | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000456 | 2015 | |
| Phylogeny | Vibrio plantisponsor sp. nov., a diazotrophic bacterium isolated from a mangrove associated wild rice (Porteresia coarctata Tateoka). | Rameshkumar N, Gomez-Gil B, Sproer C, Lang E, Dinesh Kumar N, Krishnamurthi S, Nair S, Roque A | Syst Appl Microbiol | 10.1016/j.syapm.2011.02.005 | 2011 | |
| Phylogeny | Vibrio hispanicus sp. nov., isolated from Artemia sp. and sea water in Spain. | Gomez-Gil B, Thompson FL, Thompson CC, Garcia-Gasca A, Roque A, Swings J | Int J Syst Evol Microbiol | 10.1099/ijs.0.02775-0 | 2004 |
| #6514 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16580 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #26344 | IJSEM 261 2004 ( DOI 10.1099/ijs.0.02775-0 , PubMed 14742490 ) |
| #29976 | Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26344 |
| #32914 | ; Curators of the CIP; |
| #61145 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 56966 |
| #68369 | Automatically annotated from API 20NE . |
| #68371 | Automatically annotated from API 50CH acid . |
| #68382 | Automatically annotated from API zym . |
| #119922 | Collection of Institut Pasteur ; Curators of the CIP; CIP 108392 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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