Name: Vibrio ruber MSSRF10
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17294

Type strain:

Species: Vibrio ruber

Strain Designation: MSSRF10

Culture col. no.: DSM 18600

Strain history: <- S. Nair, M.S.Swaminathan Research Foundation, India; MSSRF10

NCBI tax ID(s): 184755 (species)

Other strains from Vibrio ruber

V. ruber VR1, DSM 16370, CCRC 17186, JCM ... (type strain)
V. ruber 514-01, VG, DSM 14379

Section

Vibrio ruber MSSRF10 is a bacterium that was isolated from rhizosphere of mangrove-associated wild rice.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	"Vibrionales"
	Family	*Vibrionaceae*
	Genus	*Vibrio*
	Species	**Vibrio ruber**
	Full Scientific Name (LPSN)	Vibrio ruber Shieh et al. 2003

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7603]	Sample type/isolated from	rhizosphere of mangrove-associated wild rice
[Ref.: #7603]	Geographic location (country and/or sea, region)	Pichavaram
[Ref.: #7603]	Country	India
[Ref.: #7603]	Country ISO 3 Code	IND
[Ref.: #7603]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Mangrove
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence DQ273663 (>99% sequence identity) for Vibrio from Microbeatlas

Aquatic Samples	1
Soil Samples	1
Animal Samples	13
Plant Samples
Total Samples	15

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7603]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7603]	Vibrio sp. MSSRF10 16S ribosomal RNA gene, partial sequence	DQ273663	1392	ENA	344204 tax ID

Availability in culture collections External links

[Ref.: #7603]

Culture collection no.

DSM 18600

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Fermentative Production of Pyranone Derivate I from Marine Vibrio sp. SKMARSP9: Isolation, Characterization and Bioactivity Evaluation.	Shiva Krishna P, Sudheer Kumar B, Raju P, Murty MS, Prabhakar Rao T, Singara Charya MA, Prakasham RS	Indian J Microbiol	10.1007/s12088-015-0521-0	2015	*
Phylogeny	Vibrio rhizosphaerae sp. nov., a red-pigmented bacterium that antagonizes phytopathogenic bacteria.	Kumar NR, Nair S	Int J Syst Evol Microbiol	10.1099/ijs.0.65017-0	2007	*

References

#7603

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18600

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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