[Ref.: #993] |
Sample type/isolated from |
spoiled horse mackerel, causing food poisoning |
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[Ref.: #116231] |
Sample type/isolated from |
Animal, Spoiled horse mackerel causing food poisoning |
* marker position based on {}
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Isolation sources categories |
#Engineered |
#Food production |
#Food |
#Host |
#Other |
#Decomposing animal |
#Host |
#Fishes |
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Information on genomic background e.g. entries in nucleic sequence databass
Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #20218] |
Vibrio alginolyticus strain ATCC 17749 16S ribosomal RNA (rrs) gene, partial sequence |
EU155488 |
892 |
|
663 tax ID |
* |
[Ref.: #20218] |
Vibrio alginolyticus 16S ribosomal RNA gene, partial sequence |
HM771350 |
1471 |
|
663 tax ID |
* |
[Ref.: #20218] |
Vibrio alginolyticus strain ATCC 17749 16S ribosomal RNA gene, partial sequence |
JN188412 |
1458 |
|
663 tax ID |
* |
[Ref.: #20218] |
V.alginolyticus 16S ribosomal RNA |
X56576 |
1483 |
|
663 tax ID |
* |
[Ref.: #20218] |
V.alginolyticus (ATCC 17749T) gene for 16S ribosomal RNA |
X74690 |
1468 |
|
663 tax ID |
* |
[Ref.: #20218] |
Vibrio alginolyticus strain CGMCC1.1833 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer region, complete sequence; and 23S ribosomal RNA gene, partial sequence |
AY245204 |
250 |
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663 tax ID |
* |
[Ref.: #20218] |
Vibrio alginolyticus strain CGMCC1.1833 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer region and tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence |
AY245205 |
555 |
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663 tax ID |
* |
[Ref.: #20218] |
Vibrio alginolyticus strain CGMCC1.1833 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer region, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence |
AY245206 |
575 |
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663 tax ID |
* |
[Ref.: #20218] |
Vibrio alginolyticus gene for 16S rRNA, partial sequence, strain: NBRC 15630 |
AB680916 |
1478 |
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663 tax ID |
* |
[Ref.: #20218] |
Vibrio alginolyticus 16S rRNA |
D11192 |
217 |
|
663 tax ID |
* |
[Ref.: #20218] |
Vibrio alginolyticus 16S rRNA |
D11241 |
209 |
|
663 tax ID |
* |
[Ref.: #20218] |
Vibrio alginolyticus 16S rRNA |
D11290 |
192 |
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663 tax ID |
* |
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Availability in culture collections
External links
[Ref.: #993] |
Culture collection no. |
DSM 2171, ATCC 17749, CCM 2578, CIP 103336, CCUG 13445, NCTC 12160, NCIMB 1903 |
[Ref.: #86255] |
SI-ID 5048
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* |
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Literature: |
Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries. |
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Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Phylogeny |
Antimicrobial Activity of Lactococcus lactis subsp. lactis Isolated from a Stranded Cuvier's Beaked Whale (Ziphius cavirostris) against Gram-Positive and -Negative Bacteria. |
Suzuki A, Suzuki M |
Microorganisms |
10.3390/microorganisms9020243 |
2021 |
* |
Biotechnology |
Effect of Food Matrix Type on Growth Characteristics of and Hemolysin Production by Vibrio alginolyticus. |
Wang R, Hu X, Deng Y, Gooneratne R |
J Food Prot |
10.4315/JFP-20-490 |
2021 |
* |
Phylogeny |
Molecular Identification of Vibrio alginolyticus Causing Vibriosis in Shrimp and Its Herbal Remedy. |
Abdul Hannan MD, Mahbubur Rahman MD, Nurunnabi Mondal MD, Suzan Chandra D, Chowdhury G, Tofazzal Islam MD |
Pol J Microbiol |
10.33073/pjm-2019-042 |
2019 |
* |
Phylogeny |
Vibrio chemaguriensis sp. nov., from Sundarbans, Bay of Bengal. |
Ghosh A, Bhadury P |
Curr Microbiol |
10.1007/s00284-019-01731-7 |
2019 |
* |
Genetics |
Complete Genome Sequence of Vibrio alginolyticus ATCC 17749T. |
Liu XF, Cao Y, Zhang HL, Chen YJ, Hu CJ |
Genome Announc |
10.1128/genomeA.01500-14 |
2015 |
* |
Enzymology |
Pathogenic analysis of Vibrio alginolyticus infection in a mouse model. |
Liu XF, Zhang H, Liu X, Gong Y, Chen Y, Cao Y, Hu C |
Folia Microbiol (Praha) |
10.1007/s12223-013-0279-x |
2013 |
* |
Enzymology |
Structural and functional studies on three alginate lyases from Vibrio alginolyticus. |
Deng S, Ye J, Xu Q, Zhang H |
Protein Pept Lett |
10.2174/09298665113206660094 |
2014 |
* |
Biotechnology |
Adherence assays and Slime production of Vibrio alginolyticus and Vibrio parahaemolyticus. |
Ben Abdallah F, Chaieb K, Zmantar T, Kallel H, Bakhrouf A |
Braz J Microbiol |
10.1590/S1517-838220090002000033 |
2009 |
* |
Genetics |
Vibrio alginolyticus gyrB sequence analysis and gyrB-targeted PCR identification in environmental isolates. |
Luo P, Hu C |
Dis Aquat Organ |
10.3354/dao01984 |
2008 |
* |
Phylogeny |
Isolation and characterization of pathogenic Vibrio alginolyticus from diseased cobia Rachycentron canadum. |
Liu PC, Lin JY, Hsiao PT, Lee KK |
J Basic Microbiol |
10.1002/jobm.200310316 |
2004 |
* |
|
Method designed to detect alginate-degrading bacteria. |
Kitamikado M, Yamaguchi K, Tseng CH, Okabe B |
Appl Environ Microbiol |
10.1128/aem.56.9.2939-2940.1990 |
1990 |
* |
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Genomic analysis and biological characterization of a novel Schitoviridae phage infecting Vibrio alginolyticus. |
Tajuddin S, Khan AM, Chong LC, Wong CL, Tan JS, Ina-Salwany MY, Lau HY, Ho KL, Mariatulqabtiah AR, Tan WS |
Appl Microbiol Biotechnol |
10.1007/s00253-022-12312-3 |
2022 |
* |
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References
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#993 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 2171
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#34248 |
; Curators of the CIP;
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#41790 |
; Curators of the CIP;
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#68368 |
Automatically annotated from API 20E .
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#68369 |
Automatically annotated from API 20NE .
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#68371 |
Automatically annotated from API 50CH acid .
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#68382 |
Automatically annotated from API zym .
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#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
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#86255 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID5048.1 )
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#116231 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 103336
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- * These data were automatically processed and therefore are not curated
Change proposal
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