Name: Enterovibrio coralii DSM 19135
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17217

Type strain:

Species: Enterovibrio coralii

Culture col. no.: DSM 19135, CAIM 912, CBMAI 623, LMG 22228

Strain history: <- CAIM <- F. L. Thompson, CBMAI Sao Paulo; CC17

NCBI tax ID(s): 294935 (species)

SI-ID 129643

LMG 22228, CBMAI 623, DSM 19135, CECT 7249

Section

Enterovibrio coralii DSM 19135 is a mesophilic, Gram-negative, motile animal pathogen that was isolated from water extract of bleached Merulina ampliata.

Gram-negative
motile
animal pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	"Vibrionales"
	Family	*Vibrionaceae*
	Genus	*Enterovibrio*
	Species	**Enterovibrio coralii**
	Full Scientific Name (LPSN)	Enterovibrio coralii Thompson et al. 2005

Information on morphological and physiological properties Morphology

[Ref.: #31347]	Gram stain	negative
[Ref.: #31347]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.983

[Ref.: #31347]	Motility	yes
[Ref.: #31347]	Motility	yes
[Ref.: #69480]	Motility	yes Confidence in %98.5

[Ref.: #31347]	Cell length	3 µm

[Ref.: #31347]	Cell width	1.5 µm

[Ref.: #31347]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7933]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #7933]

Culture medium growth

[Ref.: #7933]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7933]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #7933]	growth	28 °C
[Ref.: #31347]	growth	20-30 °C
[Ref.: #31347]	optimum	25 °C

[Ref.: #7933]	Temperature range	mesophilic
[Ref.: #31347]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.955

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #31347]		NaCl		growth	02-06	%
[Ref.: #31347]		NaCl		optimum	4	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #31347]	acetate ChEBI	+	carbon source
[Ref.: #31347]	alanine ChEBI	+	carbon source
[Ref.: #31347]	asparagine ChEBI	+	carbon source
[Ref.: #31347]	aspartate ChEBI	+	carbon source
[Ref.: #31347]	cellobiose ChEBI	+	carbon source
[Ref.: #31347]	citrate ChEBI	+	carbon source
[Ref.: #31347]	dextrin ChEBI	+	carbon source
[Ref.: #31347]	formate ChEBI	+	carbon source
[Ref.: #31347]	fructose ChEBI	+	carbon source
[Ref.: #31347]	galactose ChEBI	+	carbon source
[Ref.: #31347]	gluconate ChEBI	+	carbon source
[Ref.: #31347]	glucose ChEBI	+	carbon source
[Ref.: #31347]	glutamate ChEBI	+	carbon source
[Ref.: #31347]	glycerol ChEBI	+	carbon source
[Ref.: #31347]	glycogen ChEBI	+	carbon source
[Ref.: #31347]	histidine ChEBI	+	carbon source
[Ref.: #31347]	inosine ChEBI	+	carbon source
[Ref.: #31347]	L-alaninamide ChEBI	+	carbon source
[Ref.: #31347]	lactose ChEBI	+	carbon source
[Ref.: #31347]	maltose ChEBI	+	carbon source
[Ref.: #31347]	mannitol ChEBI	+	carbon source
[Ref.: #31347]	mannose ChEBI	+	carbon source
[Ref.: #31347]	melibiose ChEBI	+	carbon source
[Ref.: #31347]	methyl D-glucoside ChEBI	+	carbon source
[Ref.: #31347]	methyl pyruvate ChEBI	+	carbon source
[Ref.: #31347]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #31347]	nitrate ChEBI	+	reduction
[Ref.: #31347]	ornithine ChEBI	+	carbon source
[Ref.: #31347]	propionate ChEBI	+	carbon source
[Ref.: #31347]	raffinose ChEBI	+	carbon source
[Ref.: #31347]	serine ChEBI	+	carbon source
[Ref.: #31347]	sorbitol ChEBI	+	carbon source
[Ref.: #31347]	succinate ChEBI	+	carbon source
[Ref.: #31347]	sucrose ChEBI	+	carbon source
[Ref.: #31347]	threonine ChEBI	+	carbon source
[Ref.: #31347]	thymidine ChEBI	+	carbon source
[Ref.: #31347]	trehalose ChEBI	+	carbon source
[Ref.: #31347]	tween 40 ChEBI	+	carbon source
[Ref.: #31347]	tween 80 ChEBI	+	carbon source
[Ref.: #31347]	uridine ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #31347]	acid phosphatase	+	3.1.3.2
[Ref.: #31347]	alkaline phosphatase	+	3.1.3.1
[Ref.: #31347]	cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7933]	Sample type/isolated from	water extract of bleached Merulina ampliata
[Ref.: #7933]	Host species	Merulina ampliata
[Ref.: #7933]	Geographic location (country and/or sea, region)	Magnetic Island
[Ref.: #7933]	Country	Australia
[Ref.: #7933]	Country ISO 3 Code	AUS
[Ref.: #7933]	Continent	Australia and Oceania
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	-
#Host	#Invertebrates (Other)	#Cnidaria (Corals)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ842343 (>99% sequence identity) for Enterovibrio coralii subclade from Microbeatlas

Aquatic Samples	11248
Soil Samples	818
Animal Samples	32390
Plant Samples	990
Total Samples	45446

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7933]	Pathogenicity (animal)	yes
[Ref.: #7933]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7933]	Enterovibrio coralii partial 16S rRNA gene, strain LMG 22228T	AJ842343	1505	ENA	294935 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Enterovibrio coralii CAIM 912	GCA_001559595	contig	GenBank	294935 tax ID	*
[Ref.: #66792]	Enterovibrio coralii strain CAIM 912	294935.3	wgs	PATRIC	294935 tax ID	*
[Ref.: #66792]	Enterovibrio coralii CAIM 912	2724679056	draft	JGI IMG/M	294935 tax ID	*

[Ref.: #31347]

GC-content

48.2 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Enterovibrio coralii strain CAIM 912 PATRIC: 294935.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Enterovibrio coralii strain CAIM 912 PATRIC: 294935.3
[Ref.: #69480]	gram-positive	no	98.937	no
[Ref.: #69480]	anaerobic	no	97.823	no
[Ref.: #69480]	halophile	yes	54.347	no
[Ref.: #69480]	spore-forming	no	94.024	no
[Ref.: #69480]	glucose-util	yes	94.604	yes
[Ref.: #69480]	motile	yes	93.237	yes
[Ref.: #69480]	flagellated	yes	90.223	no
[Ref.: #69480]	aerobic	yes	82.897	no
[Ref.: #69480]	thermophile	no	99.66	yes
[Ref.: #69480]	glucose-ferment	yes	87.652	no

Availability in culture collections External links

[Ref.: #7933]

Culture collection no.

DSM 19135, CAIM 912, CBMAI 623, LMG 22228

[Ref.: #86216]

SI-ID 129643

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Corallibacterium pacifica gen. nov., sp. nov., a Novel Bacterium of the Family Vibrionaceae Isolated from Hard Coral.	Hettiarachchi SA, Lee SJ, Lee Y, Kwon YK, Kwon KK, Yang SH, Jo E, Kang DH, Oh C	Curr Microbiol	10.1007/s00284-018-1455-7	2018	*
Phylogeny	Enterovibrio pacificus sp. nov., isolated from seawater, and emended descriptions of Enterovibrio coralii and the genus Enterovibrio.	Liu Y, Zhang Z, Wang Y, Zheng Y, Zhang XH	Int J Syst Evol Microbiol	10.1099/ijsem.0.000721	2015	*
Phylogeny	Photobacterium rosenbergii sp. nov. and Enterovibrio coralii sp. nov., vibrios associated with coral bleaching.	Thompson FL, Thompson CC, Naser S, Hoste B, Vandemeulebroecke K, Munn C, Bourne D, Swings J	Int J Syst Evol Microbiol	10.1099/ijs.0.63370-0	2005	*

References

#7933

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19135

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#31347

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27661 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#86216

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID129643.1 )

#27661

IJSEM 913 2005 ( DOI 10.1099/ijs.0.63370-0 , PubMed 15774685 )

* These data were automatically processed and therefore are not curated

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Enterovibrio coralii strain CAIM 912

Enterovibrio coralii strain CAIM 912

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