Sporomusa acidovorans (DSM 3132, ATCC 49682, Mol)

Name: Sporomusa acidovorans (DSM 3132, ATCC 49682, Mol)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 17188

Type strain

Strain Designation Mol

Culture col. no. DSM 3132 ATCC 49682 Mol

NCBI tax ID(s) 1123286 112900

Special Collections DSMZ

Links

Sporomusa acidovorans Mol is an anaerobe, mesophilic prokaryote that was isolated from effluent from alcohol-distillery plant.

anaerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 46116

ATCC 49682,DSM 3132,NCIMB 13134

@ref 20215

Last LPSN update 2025-12-16 09:51:01

Domain Bacillati

Phylum Bacillota

Class Negativicutes

Order Selenomonadales

Family Sporomusaceae

Genus Sporomusa

Species Sporomusa acidovorans

Full scientific name Sporomusa acidovorans Ollivier et al. 1990

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
1307	SPOROMUSA ACIDOVORANS MEDIUM (DSMZ Medium 311c)		Medium recipe at MediaDive	Name: SPOROMUSA ACIDOVORANS MEDIUM (DSMZ Medium 311c) Composition: D-Fructose 4.97512 g/l NaCl 2.23881 g/l Yeast extract 1.99005 g/l Casitone 1.99005 g/l Na2CO3 0.995025 g/l MgSO4 x 7 H2O 0.497512 g/l NH4Cl 0.497512 g/l K2HPO4 0.348259 g/l Na2S x 9 H2O 0.298507 g/l L-Cysteine HCl x H2O 0.298507 g/l CaCl2 x 2 H2O 0.248756 g/l KH2PO4 0.228856 g/l HCl 0.00248756 g/l FeSO4 x 7 H2O 0.00199005 g/l FeCl2 x 4 H2O 0.00149254 g/l NaOH 0.000497512 g/l Sodium resazurin 0.000497512 g/l CoCl2 x 6 H2O 0.000189055 g/l Pyridoxine hydrochloride 9.95025e-05 g/l MnCl2 x 4 H2O 9.95025e-05 g/l ZnCl2 6.96517e-05 g/l p-Aminobenzoic acid 4.97512e-05 g/l Calcium D-(+)-pantothenate 4.97512e-05 g/l Nicotinic acid 4.97512e-05 g/l Riboflavin 4.97512e-05 g/l Thiamine HCl 4.97512e-05 g/l (DL)-alpha-Lipoic acid 4.97512e-05 g/l Na2MoO4 x 2 H2O 3.58209e-05 g/l NiCl2 x 6 H2O 2.38806e-05 g/l Biotin 1.99005e-05 g/l Folic acid 1.99005e-05 g/l H3BO3 5.97015e-06 g/l Na2WO4 x 2 H2O 3.9801e-06 g/l Na2SeO3 x 5 H2O 2.98507e-06 g/l CuCl2 x 2 H2O 1.99005e-06 g/l Vitamin B12 9.95025e-07 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
1307	positive	growth	35	mesophilic

Physiology and metabolism

Oxygen tolerance

1307

Oxygen toleranceanaerobe

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	suberin monomers biosynthesis	100	2 of 2
66794	coenzyme A metabolism	100	4 of 4
66794	L-lactaldehyde degradation	100	3 of 3
66794	gluconeogenesis	100	8 of 8
66794	C4 and CAM-carbon fixation	100	8 of 8
66794	CO2 fixation in Crenarchaeota	100	9 of 9
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	methylglyoxal degradation	100	5 of 5
66794	lactate fermentation	100	4 of 4
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	ppGpp biosynthesis	100	4 of 4
66794	aminopropanol phosphate biosynthesis	100	2 of 2
66794	aspartate and asparagine metabolism	100	9 of 9
66794	folate polyglutamylation	100	1 of 1
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	reductive acetyl coenzyme A pathway	100	7 of 7
66794	cyanate degradation	100	3 of 3
66794	lipoate biosynthesis	100	5 of 5
66794	adipate degradation	100	2 of 2
66794	palmitate biosynthesis	95.45	21 of 22
66794	urea cycle	92.31	12 of 13
66794	vitamin B1 metabolism	92.31	12 of 13
66794	propionate fermentation	90	9 of 10
66794	threonine metabolism	90	9 of 10
66794	alanine metabolism	89.66	26 of 29
66794	glutamate and glutamine metabolism	89.29	25 of 28
66794	valine metabolism	88.89	8 of 9
66794	lipid A biosynthesis	88.89	8 of 9
66794	serine metabolism	88.89	8 of 9
66794	molybdenum cofactor biosynthesis	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	vitamin B12 metabolism	88.24	30 of 34
66794	isoleucine metabolism	87.5	7 of 8
66794	tetrahydrofolate metabolism	85.71	12 of 14
66794	propanol degradation	85.71	6 of 7
66794	citric acid cycle	85.71	12 of 14
66794	ubiquinone biosynthesis	85.71	6 of 7
66794	NAD metabolism	83.33	15 of 18
66794	factor 420 biosynthesis	80	4 of 5
66794	Entner Doudoroff pathway	80	8 of 10
66794	hydrogen production	80	4 of 5
66794	glycine betaine biosynthesis	80	4 of 5
66794	peptidoglycan biosynthesis	80	12 of 15
66794	photosynthesis	78.57	11 of 14
66794	heme metabolism	78.57	11 of 14
66794	d-mannose degradation	77.78	7 of 9
66794	phenylalanine metabolism	76.92	10 of 13
66794	glycolysis	76.47	13 of 17
66794	histidine metabolism	75.86	22 of 29
66794	pyrimidine metabolism	75.56	34 of 45
66794	purine metabolism	75.53	71 of 94
66794	glycogen biosynthesis	75	3 of 4
66794	degradation of sugar alcohols	75	12 of 16
66794	butanoate fermentation	75	3 of 4
66794	acetate fermentation	75	3 of 4
66794	sulfopterin metabolism	75	3 of 4
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	toluene degradation	75	3 of 4
66794	phenol degradation	75	15 of 20
66794	CMP-KDO biosynthesis	75	3 of 4
66794	biotin biosynthesis	75	3 of 4
66794	flavin biosynthesis	73.33	11 of 15
66794	pentose phosphate pathway	72.73	8 of 11
66794	vitamin B6 metabolism	72.73	8 of 11
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	4-hydroxyphenylacetate degradation	70	7 of 10
66794	leucine metabolism	69.23	9 of 13
66794	methionine metabolism	69.23	18 of 26
66794	tryptophan metabolism	68.42	26 of 38
66794	oxidative phosphorylation	67.03	61 of 91
66794	glycolate and glyoxylate degradation	66.67	4 of 6
66794	methane metabolism	66.67	2 of 3
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	enterobactin biosynthesis	66.67	2 of 3
66794	octane oxidation	66.67	2 of 3
66794	cysteine metabolism	66.67	12 of 18
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	formaldehyde oxidation	66.67	2 of 3
66794	acetoin degradation	66.67	2 of 3
66794	glutathione metabolism	64.29	9 of 14
66794	ketogluconate metabolism	62.5	5 of 8
66794	arginine metabolism	62.5	15 of 24
66794	phosphatidylethanolamine bioynthesis	61.54	8 of 13
66794	phenylacetate degradation (aerobic)	60	3 of 5
66794	degradation of sugar acids	60	15 of 25
66794	coenzyme M biosynthesis	60	6 of 10
66794	glycogen metabolism	60	3 of 5
66794	cellulose degradation	60	3 of 5
66794	myo-inositol biosynthesis	60	6 of 10
66794	starch degradation	60	6 of 10
66794	lysine metabolism	59.52	25 of 42
66794	lipid metabolism	58.06	18 of 31
66794	isoprenoid biosynthesis	57.69	15 of 26
66794	degradation of pentoses	57.14	16 of 28
66794	degradation of hexoses	55.56	10 of 18
66794	nitrate assimilation	55.56	5 of 9
66794	non-pathway related	55.26	21 of 38
66794	polyamine pathway	52.17	12 of 23
66794	pantothenate biosynthesis	50	3 of 6
66794	kanosamine biosynthesis II	50	1 of 2
66794	1,4-dihydroxy-6-naphthoate biosynthesis	50	3 of 6
66794	dolichol and dolichyl phosphate biosynthesis	50	1 of 2
66794	grixazone biosynthesis	50	1 of 2
66794	degradation of aromatic, nitrogen containing compounds	50	6 of 12
66794	glycine metabolism	50	5 of 10
66794	ribulose monophosphate pathway	50	1 of 2
66794	tyrosine metabolism	50	7 of 14
66794	ethanol fermentation	50	1 of 2
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	carnitine metabolism	50	4 of 8
66794	cis-vaccenate biosynthesis	50	1 of 2
66794	phenylpropanoid biosynthesis	46.15	6 of 13
66794	sulfate reduction	46.15	6 of 13
66794	proline metabolism	45.45	5 of 11
66794	4-hydroxymandelate degradation	44.44	4 of 9
66794	benzoyl-CoA degradation	42.86	3 of 7
66794	gallate degradation	40	2 of 5
66794	3-phenylpropionate degradation	40	6 of 15
66794	ethylmalonyl-CoA pathway	40	2 of 5
66794	3-chlorocatechol degradation	40	2 of 5
66794	metabolism of disaccharids	36.36	4 of 11
66794	IAA biosynthesis	33.33	1 of 3
66794	sphingosine metabolism	33.33	2 of 6
66794	allantoin degradation	33.33	3 of 9
66794	sulfoquinovose degradation	33.33	1 of 3
66794	bile acid biosynthesis, neutral pathway	29.41	5 of 17
66794	aclacinomycin biosynthesis	28.57	2 of 7
66794	ascorbate metabolism	27.27	6 of 22
66794	d-xylose degradation	27.27	3 of 11
66794	androgen and estrogen metabolism	25	4 of 16
66794	cyclohexanol degradation	25	1 of 4
66794	vitamin E metabolism	25	1 of 4
66794	methanogenesis from CO2	25	3 of 12

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Food production	#Fermented
#Engineered	#Industrial	#Plant (Factory)
#Engineered	#Waste	#Industrial wastewater
#Engineered	#Food production	#Beverage

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
1307	effluent from alcohol-distillery plant	France	FRA	Europe

Taxonmaps

69479

Global distribution of 16S sequence HE966438 (>99% sequence identity) for Sporomusa acidovorans subclade from Microbeatlas

Aquatic Samples	165
Soil Samples	268
Animal Samples	65
Plant Samples	28
Total Samples	526

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
1307	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	SPACI assembly for Sporomusa acidovorans DSM 3132	complete	GCA_002257695	1123286.3	2835150038	1123286	95.04
66792	IMG-taxon 2622736588 annotated assembly for Sporomusa acidovorans Mol	scaffold	GCA_900101845	112900.4	2622736588	112900	48.45

Genome browser: GCA_002257695

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Sporomusa acidovorans 16S rRNA gene, strain DSM 3132 Type	AJ279798	1528	112900
1307	Sporomusa acidovorans partial 16S rRNA gene, strain DSM 3132, clone 58	HE966438	1631	112900
1307	Sporomusa acidovorans partial 16S rRNA gene, strain DSM 3132, clone 30	HE966437	1544	112900
1307	Sporomusa acidovorans partial 16S rRNA gene, strain DSM 3132, clone 28	HE966436	1543	112900
1307	Sporomusa acidovorans partial 16S rRNA gene, strain DSM 3132, clone 51	HE966435	1543	112900
1307	Sporomusa acidovorans partial 16S rRNA gene, strain DSM 3132, clone 55	HE966434	1543	112900
1307	Sporomusa acidovorans partial 16S rRNA gene, strain DSM 3132, clone 56	HE966433	1543	112900

GC content

1307

GC-content (mol%)42.0

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Sporomusa acidovorans Mol
NCBI: GCA_900101845

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	85.30	no
125439	gram_stain	BacteriaNetⓘ	variable	64.50	no
125439	motility	BacteriaNetⓘ	yes	54.70	no
125439	spore_formation	BacteriaNetⓘ	yes	64.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Sporomusa acidovorans DSM 3132
PATRIC: 1123286.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	82.39	no
125438	anaerobic	anaerobicⓘ	yes	80.04	yes
125438	spore-forming	spore-formingⓘ	yes	69.47	no
125438	aerobic	aerobicⓘ	no	85.70	no
125438	thermophilic	thermophileⓘ	no	86.14	no
125438	flagellated	motile2+ⓘ	yes	71.97	no

Literature

Title	Authors	Journal	DOI	Year
Implications for nitrogen and sulphur cycles: phylogeny and niche-range of Nitrospirota in terrestrial aquifers.	Mosley OE, Gios E, Handley KM.	ISME Commun	10.1093/ismeco/ycae047	2024
Energy conservation under extreme energy limitation: the role of cytochromes and quinones in acetogenic bacteria.	Rosenbaum FP, Muller V.	Extremophiles	10.1007/s00792-021-01241-0	2021
The Sporomusa type Nfn is a novel type of electron-bifurcating transhydrogenase that links the redox pools in acetogenic bacteria.	Kremp F, Roth J, Muller V.	Sci Rep	10.1038/s41598-020-71038-2	2020
Microbial electrosynthesis of methane and acetate-comparison of pure and mixed cultures.	Hengsbach JN, Sabel-Becker B, Ulber R, Holtmann D.	Appl Microbiol Biotechnol	10.1007/s00253-022-12031-9	2022
Using gas mixtures of CO, CO₂ and H₂ as microbial substrates: the do's and don'ts of successful technology transfer from laboratory to production scale.	Takors R, Kopf M, Mampel J, Bluemke W, Blombach B, Eikmanns B, Bengelsdorf FR, Weuster-Botz D, Durre P.	Microb Biotechnol	10.1111/1751-7915.13270	2018
Microbial and Genetic Resources for Cobalamin (Vitamin B12) Biosynthesis: From Ecosystems to Industrial Biotechnology.	Balabanova L, Averianova L, Marchenok M, Son O, Tekutyeva L.	Int J Mol Sci	10.3390/ijms22094522	2021
Genome Sequence of the Homoacetogenic, Gram-Negative, Endospore-Forming Bacterium Sporomusa acidovorans DSM 3132.	Humphreys JR, Daniel R, Poehlein A	Genome Announc	10.1128/genomeA.00981-17	2017

References

#1307	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 3132
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Sporomusa acidovorans (DSM 3132, ATCC 49682, Mol)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Pathway annotation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_002257695

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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