Name: Veillonella dispar ERN
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17172

Type strain:

Species: Veillonella dispar

Strain Designation: ERN

Culture col. no.: CCUG 54948, NCTC 11831, DSM 20735, ATCC 17748, CIP 108002, AIP 10221

Strain history: CIP <- 2003, J.P. Carlier, Inst. Pasteur, Paris, France: strain AIP 10221 <- ATCC <- M. Rogosa, ERN <- M. Pelczar

NCBI tax ID(s): 546273 (strain), 39778 (species)

SI-ID 44531

ATCC 17748, DSM 20735, NCTC 11831, CIP 108002, CCUG 54948

Section

Veillonella dispar ERN is an anaerobe, mesophilic, coccus-shaped human pathogen that was isolated from human mouth.

coccus-shaped
anaerobe
human pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Negativicutes*
	Order	*Veillonellales*
	Family	*Veillonellaceae*
	Genus	*Veillonella*
	Species	**Veillonella dispar**
	Full Scientific Name (LPSN)	Veillonella dispar (Rogosa 1965) Mays et al. 1982

Synonym

Veillonella alcalescens subsp. dispar

Information on morphological and physiological properties Morphology

[Ref.: #118945]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.96

[Ref.: #118945]	Cell shape	oval-shaped
[Ref.: #68367]	Cell shape	coccus-shaped * from API 20A

[Ref.: #118945]	Motility	no

[Ref.: #118945]	Hemolysis ability	1

[Ref.: #9045]	Incubation period	1-2 days

[Ref.: #60408]	Incubation period	2-3 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9045]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #9045]

Culture medium growth

[Ref.: #9045]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9045]

Culture medium composition

expand / minimize

[Ref.: #9045]

Culture medium

VEILLONELLA MEDIUM (DSMZ Medium 136)

[Ref.: #9045]

Culture medium growth

[Ref.: #9045]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9045]

Culture medium composition

expand / minimize

[Ref.: #39804]

Culture medium

MEDIUM 20 - for Anaerobic bacteria

[Ref.: #39804]

Culture medium growth

[Ref.: #39804]

Culture medium composition

expand / minimize

[Ref.: #118945]

Culture medium

CIP Medium 20

[Ref.: #118945]

Culture medium growth

[Ref.: #118945]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #9045]	growth	37 °C
[Ref.: #39804]	growth	37 °C
[Ref.: #60408]	growth	37 °C

[Ref.: #9045]	Temperature range	mesophilic
[Ref.: #39804]	Temperature range	mesophilic
[Ref.: #60408]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #9045]	Oxygen tolerance	anaerobe
[Ref.: #60408]	Oxygen tolerance	anaerobe
[Ref.: #118945]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %99.124

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.946

[Ref.: #9045]	Murein short key	A31
[Ref.: #9045]	Murein types	A1gamma m-Dpm-direct

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68380]	arginine ChEBI	-	hydrolysis	* from API rID32A
[Ref.: #118945]	cellobiose ChEBI	-	degradation
[Ref.: #68367]	cellobiose ChEBI	-	builds acid from	* from API 20A
[Ref.: #118945]	D-arabinose ChEBI	-	degradation
[Ref.: #118945]	D-fructose ChEBI	-	degradation
[Ref.: #118945]	D-glucose ChEBI	+	degradation
[Ref.: #68367]	D-glucose ChEBI	-	builds acid from	* from API 20A
[Ref.: #68367]	D-mannitol ChEBI	-	builds acid from	* from API 20A
[Ref.: #68367]	D-mannose ChEBI	-	builds acid from	* from API 20A
[Ref.: #68380]	D-mannose ChEBI	-	fermentation	* from API rID32A
[Ref.: #118945]	D-xylose ChEBI	-	degradation
[Ref.: #68367]	D-xylose ChEBI	-	builds acid from	* from API 20A
[Ref.: #118945]	esculin ChEBI	-	hydrolysis
[Ref.: #68367]	esculin ChEBI	-	hydrolysis	* from API 20A
[Ref.: #68367]	gelatin ChEBI	-	hydrolysis	* from API 20A
[Ref.: #68367]	glycerol ChEBI	-	builds acid from	* from API 20A
[Ref.: #68367]	L-arabinose ChEBI	-	builds acid from	* from API 20A
[Ref.: #68380]	L-glutamate ChEBI	-	degradation	* from API rID32A
[Ref.: #68367]	L-rhamnose ChEBI	-	builds acid from	* from API 20A
[Ref.: #118945]	lactose ChEBI	-	degradation
[Ref.: #68367]	lactose ChEBI	-	builds acid from	* from API 20A
[Ref.: #118945]	maltose ChEBI	-	degradation
[Ref.: #68367]	maltose ChEBI	-	builds acid from	* from API 20A
[Ref.: #68367]	melezitose ChEBI	-	builds acid from	* from API 20A
[Ref.: #118945]	nitrate ChEBI	+	reduction
[Ref.: #118945]	nitrate ChEBI	+	respiration
[Ref.: #118945]	nitrite ChEBI	-	reduction
[Ref.: #68367]	raffinose ChEBI	-	builds acid from	* from API 20A
[Ref.: #68380]	raffinose ChEBI	-	fermentation	* from API rID32A
[Ref.: #118945]	salicin ChEBI	-	degradation
[Ref.: #68367]	salicin ChEBI	-	builds acid from	* from API 20A
[Ref.: #68367]	sorbitol ChEBI	-	builds acid from	* from API 20A
[Ref.: #118945]	sucrose ChEBI	-	degradation
[Ref.: #68367]	sucrose ChEBI	-	builds acid from	* from API 20A
[Ref.: #68367]	trehalose ChEBI	-	builds acid from	* from API 20A
[Ref.: #68367]	tryptophan ChEBI	-	energy source	* from API 20A, API rID32A
[Ref.: #68367]	urea ChEBI	-	hydrolysis	* from API 20A, API rID32A
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #118945]		indole ChEBI	no
[Ref.: #68367]		indole ChEBI	no	* from API 20A, API rID32A

	Physiological tests	Metabolite	Indole test
[Ref.: #68380]		indole ChEBI	-	* from API rID32A, API 20A

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #68380]	alanine arylamidase	-	3.4.11.2	* from API rID32A
[Ref.: #68380]	alkaline phosphatase	-	3.1.3.1	* from API rID32A, API zym
[Ref.: #68380]	alpha-arabinosidase	-	3.2.1.55	* from API rID32A
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68380]	alpha-fucosidase	-	3.2.1.51	* from API rID32A, API zym
[Ref.: #68380]	alpha-galactosidase	-	3.2.1.22	* from API rID32A, API zym
[Ref.: #68380]	alpha-glucosidase	-	3.2.1.20	* from API rID32A, API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #118945]	amylase	-
[Ref.: #68380]	arginine dihydrolase	-	3.5.3.6	* from API rID32A
[Ref.: #118945]	beta-galactosidase	-	3.2.1.23
[Ref.: #68380]	beta-galactosidase	-	3.2.1.23	* from API rID32A, API zym
[Ref.: #68380]	beta-Galactosidase 6-phosphate	-		* from API rID32A
[Ref.: #68380]	beta-glucosidase	-	3.2.1.21	* from API rID32A, API 20A, API zym
[Ref.: #68380]	beta-glucuronidase	-	3.2.1.31	* from API rID32A, API zym
[Ref.: #118945]	caseinase	-	3.4.21.50
[Ref.: #118945]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #118945]	DNase	-
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #118945]	gelatinase	-
[Ref.: #68367]	gelatinase	-		* from API 20A
[Ref.: #68380]	glutamate decarboxylase	-	4.1.1.15	* from API rID32A
[Ref.: #68380]	glutamyl-glutamate arylamidase	-		* from API rID32A
[Ref.: #68380]	glycin arylamidase	-		* from API rID32A
[Ref.: #68380]	histidine arylamidase	-		* from API rID32A
[Ref.: #68380]	L-arginine arylamidase	-		* from API rID32A
[Ref.: #118945]	lecithinase	-
[Ref.: #68380]	leucine arylamidase	-	3.4.11.1	* from API rID32A, API zym
[Ref.: #68380]	leucyl glycin arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #118945]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68380]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32A, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #118945]	oxidase	-
[Ref.: #68380]	phenylalanine arylamidase	-		* from API rID32A
[Ref.: #68380]	proline-arylamidase	-	3.4.11.5	* from API rID32A
[Ref.: #118945]	protease	-
[Ref.: #68380]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32A
[Ref.: #68380]	serine arylamidase	-		* from API rID32A
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68380]	tryptophan deaminase	-	4.1.99.1	* from API rID32A
[Ref.: #118945]	tween esterase	-
[Ref.: #68380]	tyrosine arylamidase	-		* from API rID32A
[Ref.: #118945]	urease	-	3.5.1.5
[Ref.: #68380]	urease	-	3.5.1.5	* from API rID32A, API 20A
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Indole productionIND	Urease/urea hydrolysisURE	Acid from D-glucoseGLU	Acid from D-mannitolMAN	Acid from lactoseLAC	Acid from sucroseSAC	Acid from maltoseMAL	Acid from salicinSAL	Acid from D-xyloseXYL	Acid from L-arabinoseARA	Gelatinase/gelatin hydrolysisGEL	Esculin hydrolysis/beta-glucosidaseESC	Acid from glycerolGLY	Acid from cellobioseCEL	Acid from D-mannoseMNE	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from sorbitolSOR	Acid from L-rhamnoseRHA	Acid from trehaloseTRE	CatalaseCAT	Spores presentSPOR	GramGRAM	Morphology coccus="+" rod="-"COCC
[Ref.: #9045]	2151	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	+

API® rID32A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	alpha-Galactosidasealpha GAL	beta-Galactosidasebeta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha-Glucosidasealpha GLU	beta-Glucosidasebeta GLU	alpha-Arabinosidasealpha ARA	beta-Glucuronidasebeta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	Fermentation of D-mannoseMNE	Fermentation of raffinoseRAF	Glutamate decarboxylaseGDC	alpha-Fucosidasealpha FUC	Reduction of nitrateNIT	Indole productionIND	Alkaline phosphatasePAL	L-arginine arylamidaseArgA	Proline arylamidaseProA	Leucyl glycin arylamidaseLGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	Pyrrolidonyl arylamidasePyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
[Ref.: #9045]	12367	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+/-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
[Ref.: #9045]	12366	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #118945]	10811	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9045]	Sample type/isolated from	human mouth

[Ref.: #60408]	Sample type/isolated from	Human oral cavity

[Ref.: #118945]	Sample type/isolated from	Human, Mouth
* marker position based on {}

Isolation sources categories

#Host	#Human	-
#Host Body-Site	#Oral cavity and airways	#Mouth

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence X84006 (>99% sequence identity) for Veillonella from Microbeatlas

Aquatic Samples	15
Soil Samples	4
Animal Samples	5852
Plant Samples	16
Total Samples	5887

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9045]	Pathogenicity (human)	yes, in single cases
[Ref.: #9045]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #118945]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #9045]	Veillonella dispar 16S ribosomal RNA gene, partial sequence	AF439639	1375	ENA	39778 tax ID
[Ref.: #20218]	Veillonella dispar strain ATCC 17748 16S ribosomal RNA gene, partial sequence	AY995770	1498	ENA	39778 tax ID	*
[Ref.: #20218]	Veillonella dispar strain DSM 20735 16S ribosomal RNA gene, partial sequence	HQ012014	937	ENA	39778 tax ID	*
[Ref.: #20218]	V.dispar 16S rRNA gene	X84006	1513	ENA	39778 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Veillonella dispar NCTC11831	GCA_900637515	complete	GenBank	39778 tax ID	*
[Ref.: #66792]	Veillonella dispar ATCC 17748	GCA_000160015	scaffold	GenBank	546273 tax ID	*
[Ref.: #66792]	Veillonella dispar ATCC 17748	546273.3	wgs	PATRIC	546273 tax ID	*
[Ref.: #66792]	Veillonella dispar ATCC 17748	546273.14	wgs	PATRIC	546273 tax ID	*
[Ref.: #66792]	Veillonella dispar strain NCTC11831	39778.224	complete	PATRIC	39778 tax ID	*
[Ref.: #66792]	Veillonella dispar ATCC 17748	643886074	draft	JGI IMG/M	546273 tax ID	*

[Ref.: #9045]

GC-content

38.0 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Veillonella dispar NCTC11831 NCBI: GCA_900637515.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Veillonella dispar NCTC11831 NCBI: GCA_900637515.1
[Ref.: #69480]	flagellated	no	96.345	no
[Ref.: #69480]	gram-positive	no	90.712	no
[Ref.: #69480]	anaerobic	yes	99.467	yes
[Ref.: #69480]	aerobic	no	97.224	no
[Ref.: #69480]	halophile	no	84.152	no
[Ref.: #69480]	spore-forming	no	87.527	no
[Ref.: #69480]	thermophile	no	99.245	yes
[Ref.: #69480]	glucose-util	yes	54.843	no
[Ref.: #69480]	motile	no	90.778	no
[Ref.: #69480]	glucose-ferment	no	51.494	no

Availability in culture collections External links

[Ref.: #9045]

Culture collection no.

CCUG 54948, NCTC 11831, DSM 20735, ATCC 17748, CIP 108002, AIP 10221

[Ref.: #86171]

SI-ID 44531

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Effects of Streptococcus mutans gtfC deficiency on mixed oral biofilms in vitro.	Thurnheer T, van der Ploeg JR, Giertsen E, Guggenheim B	Caries Res	10.1159/000091065	2006	*
Phylogeny	Veillonella nakazawae sp. nov., an anaerobic Gram-negative coccus isolated from the oral cavity of Japanese children.	Mashima I, Theodorea CF, Djais AA, Kunihiro T, Kawamura Y, Otomo M, Saitoh M, Tamai R, Kiyoura Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.004583	2020	*

References

#9045

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20735

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#39804 ; Curators of the CIP;
#60408 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 54948

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68367

Automatically annotated from API 20A .

#68380

Automatically annotated from API rID32A .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#86171

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID44531.1 )

#118945 Collection of Institut Pasteur ; Curators of the CIP; CIP 108002
* These data were automatically processed and therefore are not curated

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Search for species Veillonella dispar in external resources:
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Veillonella dispar NCTC11831

Veillonella dispar NCTC11831

Change proposal

Change proposal