Name: Mitsuokella jalaludinii M 9
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17135

Type strain:

Species: Mitsuokella jalaludinii

Strain Designation: M 9, M9T

Culture col. no.: DSM 13811, ATCC BAA-307, CIP 108358, JCM 12226

Strain history: CIP <- 2004, DSMZ <- Y. W. Ho <- G. Q. Lan, Putra Univ., UPM, Malaysia: strain M9T

NCBI tax ID(s): 1410665 (strain), 187979 (species)

SI-ID 100782

ATCC BAA-307, DSM 13811, CIP 108358, JCM 12226

Section

Mitsuokella jalaludinii M 9 is an anaerobe, mesophilic, Gram-negative bacterium that was isolated from rumen of cattle.

Gram-negative
anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Negativicutes*
	Order	*Selenomonadales*
	Family	*Selenomonadaceae*
	Genus	*Mitsuokella*
	Species	**Mitsuokella jalaludinii**
	Full Scientific Name (LPSN)	Mitsuokella jalaludinii Lan et al. 2002

Information on morphological and physiological properties Morphology

[Ref.: #120305]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.807

[Ref.: #120305]	Cell shape	rod-shaped

[Ref.: #120305]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5170]

Culture medium

PYG MEDIUM (MODIFIED) (DSMZ Medium 104)

[Ref.: #5170]

Culture medium growth

[Ref.: #5170]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5170]

Culture medium composition

expand / minimize

[Ref.: #33950]

Culture medium

MEDIUM 20 - for Anaerobic bacteria

[Ref.: #33950]

Culture medium growth

[Ref.: #33950]

Culture medium composition

expand / minimize

[Ref.: #120305]

Culture medium

CIP Medium 137

[Ref.: #120305]

Culture medium growth

[Ref.: #120305]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #120305]

Culture medium

CIP Medium 20

[Ref.: #120305]

Culture medium growth

[Ref.: #120305]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #5170]	growth	37 °C
[Ref.: #33950]	growth	37 °C
[Ref.: #67770]	growth	37 °C

[Ref.: #5170]	Temperature range	mesophilic
[Ref.: #33950]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #5170]	Oxygen tolerance	anaerobe
[Ref.: #120305]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %100

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %98.807

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #120305]	cellobiose ChEBI	-	degradation
[Ref.: #120305]	D-arabinose ChEBI	+	degradation
[Ref.: #120305]	D-fructose ChEBI	+	degradation
[Ref.: #120305]	D-glucose ChEBI	+	degradation
[Ref.: #120305]	D-xylose ChEBI	+	degradation
[Ref.: #120305]	esculin ChEBI	+	hydrolysis
[Ref.: #120305]	lactose ChEBI	+	degradation
[Ref.: #120305]	maltose ChEBI	+	degradation
[Ref.: #120305]	nitrate ChEBI	+	reduction
[Ref.: #120305]	nitrate ChEBI	+	respiration
[Ref.: #120305]	nitrite ChEBI	-	reduction
[Ref.: #120305]	salicin ChEBI	+	degradation
[Ref.: #120305]	sucrose ChEBI	+	degradation
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #120305]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #120305]	amylase	+
[Ref.: #120305]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #120305]	caseinase	+	3.4.21.50
[Ref.: #120305]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #120305]	DNase	+
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #120305]	gelatinase	-
[Ref.: #120305]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #120305]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #120305]	oxidase	-
[Ref.: #120305]	protease	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #120305]	tween esterase	-
[Ref.: #120305]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #120305]	11113	-	-	-	-	-	-	-	-	-	-	+	-	+	+	-	+	-	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5170]	Sample type/isolated from	rumen of cattle
[Ref.: #5170]	Country	Malaysia
[Ref.: #5170]	Country ISO 3 Code	MYS
[Ref.: #5170]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Rumen of cattle

[Ref.: #120305]	Sample type/isolated from	Animal, Cattle, rumen
[Ref.: #120305]	Country	Malaysia
[Ref.: #120305]	Country ISO 3 Code	MYS
[Ref.: #120305]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Bovinae (Cow, Cattle)
#Host Body-Site	#Organ	#Rumen

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5170]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #120305]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5170]	Mitsuokella jalaludinii strain M9 16S ribosomal RNA gene, complete sequence	AF479674	1543	ENA	187979 tax ID
[Ref.: #67770]	Mitsuokella jalaludinii gene for 16S ribosomal RNA, partial sequence	LC483549	1464	ENA	187979 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Mitsuokella jalaludinii DSM 13811	GCA_000702905	contig	GenBank	1410665 tax ID
[Ref.: #66792]	Mitsuokella jalaludinii DSM 13811	1410665.3	wgs	PATRIC	1410665 tax ID	*
[Ref.: #66792]	Mitsuokella jalaludinii DSM 13811	2561511231	draft	JGI IMG/M	1410665 tax ID	*

[Ref.: #5170]

GC-content

56.8 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Mitsuokella jalaludinii DSM 13811 PATRIC: 1410665.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Mitsuokella jalaludinii DSM 13811 PATRIC: 1410665.3
[Ref.: #69480]	motile	no	91.306	no
[Ref.: #69480]	gram-positive	no	95.032	no
[Ref.: #69480]	anaerobic	yes	99.642	yes
[Ref.: #69480]	halophile	no	87.337	no
[Ref.: #69480]	spore-forming	no	94.58	no
[Ref.: #69480]	glucose-util	yes	79.96	no
[Ref.: #69480]	thermophile	no	97.143	yes
[Ref.: #69480]	aerobic	no	99.019	yes
[Ref.: #69480]	flagellated	no	96.584	no
[Ref.: #69480]	glucose-ferment	yes	65.942	no

Availability in culture collections External links

[Ref.: #5170]

Culture collection no.

DSM 13811, ATCC BAA-307, CIP 108358, JCM 12226

[Ref.: #86134]

SI-ID 100782

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mitsuokella jalaludinii sp. nov., from the rumens of cattle in Malaysia.	Lan GQ, Ho YW, Abdullah N	Int J Syst Evol Microbiol	10.1099/00207713-52-3-713	2002	*

References

#5170

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13811

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#33950 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#86134

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID100782.1 )

#120305 Collection of Institut Pasteur ; Curators of the CIP; CIP 108358
* These data were automatically processed and therefore are not curated

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Mitsuokella jalaludinii DSM 13811

Mitsuokella jalaludinii DSM 13811

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