Name: Tsukamurella tyrosinosolvens DSM 44234
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 17101

Type strain:

Species: Tsukamurella tyrosinosolvens

Culture col. no.: DSM 44234, CCUG 38499, CIP 106771, JCM 10112, IMMIB D-1397, IFM 0810, KCTC 19177, KCTC 9965, NCTC 13231, PCM 2579

Strain history: CIP <- 2000, DSMZ <- A.F. Yassin: strain IMMIB D-1397

NCBI tax ID(s): 57704 (species)

SI-ID 50526

CIP 106771, JCM 10112, DSM 44234, KCTC 9965, CCUG 38499, KCTC 19177

Special Collections

Other strains from Tsukamurella tyrosinosolvens

Section

Tsukamurella tyrosinosolvens DSM 44234 is an aerobe, mesophilic, Gram-positive bacterium that was isolated from clinical material; blood culture of a patient with cardiac pacemaker implants.

Gram-positive
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Tsukamurellaceae*
	Genus	*Tsukamurella*
	Species	**Tsukamurella tyrosinosolvens**
	Full Scientific Name (LPSN)	Tsukamurella tyrosinosolvens Yassin et al. 1997

Synonym

Tsukamurella carboxydivorans

Information on morphological and physiological properties Morphology

[Ref.: #123704]	Gram stain	positive

[Ref.: #123704]	Cell shape	rod-shaped

[Ref.: #123704]	Motility	no

[Ref.: #123704]	Hemolysis ability	1

[Ref.: #20028]	Colony color	Sand yellow (1002)
[Ref.: #20028]	Incubation period	10-14 days
[Ref.: #20028]	Cultivation medium used	ISP 2

[Ref.: #20028]	Colony color	Beige (1001)
[Ref.: #20028]	Incubation period	10-14 days
[Ref.: #20028]	Cultivation medium used	ISP 3

[Ref.: #20028]	Colony color	Beige (1001)
[Ref.: #20028]	Incubation period	10-14 days
[Ref.: #20028]	Cultivation medium used	ISP 5

[Ref.: #20028]	Colony color	Sand yellow (1002)
[Ref.: #20028]	Incubation period	10-14 days
[Ref.: #20028]	Cultivation medium used	ISP 6

[Ref.: #20028]	Colony color	Beige (1001)
[Ref.: #20028]	Incubation period	10-14 days
[Ref.: #20028]	Cultivation medium used	ISP 7

[Ref.: #20028]	Incubation period	10-14 days
[Ref.: #20028]	Cultivation medium used	ISP 4

[Ref.: #20028]	Multicellular complex forming ability	no
[Ref.: #20028]	Medium Name (multicellularity)	ISP 2

[Ref.: #20028]	Multicellular complex forming ability	no
[Ref.: #20028]	Medium Name (multicellularity)	ISP 3

[Ref.: #20028]	Multicellular complex forming ability	no
[Ref.: #20028]	Medium Name (multicellularity)	ISP 4

[Ref.: #20028]	Multicellular complex forming ability	no
[Ref.: #20028]	Medium Name (multicellularity)	ISP 5

[Ref.: #20028]	Multicellular complex forming ability	no
[Ref.: #20028]	Medium Name (multicellularity)	ISP 6

[Ref.: #20028]	Multicellular complex forming ability	no
[Ref.: #20028]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #11496]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #11496]

Culture medium growth

[Ref.: #11496]

Culture medium link

Medium recipe at MediaDive

[Ref.: #11496]

Culture medium composition

expand / minimize

[Ref.: #20028]

Culture medium

ISP 2

[Ref.: #20028]

Culture medium growth

[Ref.: #20028]

Culture medium composition

expand / minimize

[Ref.: #20028]

Culture medium

ISP 3

[Ref.: #20028]

Culture medium growth

[Ref.: #20028]

Culture medium composition

expand / minimize

[Ref.: #20028]

Culture medium

ISP 4

[Ref.: #20028]

Culture medium growth

[Ref.: #20028]

Culture medium composition

expand / minimize

[Ref.: #20028]

Culture medium

ISP 5

[Ref.: #20028]

Culture medium growth

[Ref.: #20028]

Culture medium composition

expand / minimize

[Ref.: #20028]

Culture medium

ISP 6

[Ref.: #20028]

Culture medium growth

[Ref.: #20028]

Culture medium composition

expand / minimize

[Ref.: #20028]

Culture medium

ISP 7

[Ref.: #20028]

Culture medium growth

[Ref.: #20028]

Culture medium composition

expand / minimize

[Ref.: #42109]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #42109]

Culture medium growth

[Ref.: #42109]

Culture medium composition

expand / minimize

[Ref.: #123704]

Culture medium

CIP Medium 72

[Ref.: #123704]

Culture medium growth

[Ref.: #123704]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #11496]		growth	28 °C
[Ref.: #20028]		optimum	28 °C
[Ref.: #42109]		growth	30 °C
[Ref.: #54294]		growth	30-37 °C
[Ref.: #67770]		growth	28 °C
[Ref.: #123704]		growth	15-37 °C
[Ref.: #123704]	no	growth	10 °C
[Ref.: #123704]	no	growth	41 °C
[Ref.: #123704]	no	growth	45 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #54294]	Oxygen tolerance	aerobe
[Ref.: #123704]	Oxygen tolerance	obligate aerobe

[Ref.: #69481]

Ability of spore formation

no Confidence in %91

	Salt	Tested relation		Salt conc.
[Ref.: #20028]	NaCl		maximum	7.5	%
[Ref.: #123704]	NaCl		growth	0-8	%
[Ref.: #123704]	NaCl	no	growth	10	%

[Ref.: #67770]

Observation

quinones: MK-9, MK-8, MK-10

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68368]	amygdalin ChEBI	-	fermentation	* from API 20E
[Ref.: #20028]	arabinose ChEBI	-
[Ref.: #68368]	arginine ChEBI	+	hydrolysis	* from API 20E
[Ref.: #20028]	cellulose ChEBI	-
[Ref.: #123704]	citrate ChEBI	-	carbon source
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #68379]	D-glucose ChEBI	-	fermentation	* from API Coryne, API 20E
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne, API 20E
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #123704]	esculin ChEBI	+	hydrolysis
[Ref.: #68379]	esculin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #20028]	fructose ChEBI	+
[Ref.: #68379]	gelatin ChEBI	-	hydrolysis	* from API Coryne, API 20E
[Ref.: #20028]	glucose ChEBI	+
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #123704]	hippurate ChEBI	-	hydrolysis
[Ref.: #68368]	L-arabinose ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	L-rhamnose ChEBI	-	fermentation	* from API 20E
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68368]	lysine ChEBI	+	degradation	* from API 20E
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #20028]	mannitol ChEBI	+
[Ref.: #68368]	melibiose ChEBI	-	fermentation	* from API 20E
[Ref.: #20028]	myo-inositol ChEBI	+
[Ref.: #68368]	myo-inositol ChEBI	-	fermentation	* from API 20E
[Ref.: #123704]	nitrate ChEBI	-	reduction
[Ref.: #123704]	nitrate ChEBI	-	respiration
[Ref.: #68379]	nitrate ChEBI	-	reduction	* from API Coryne
[Ref.: #123704]	nitrite ChEBI	-	reduction
[Ref.: #68368]	ornithine ChEBI	+	degradation	* from API 20E
[Ref.: #20028]	raffinose ChEBI	-
[Ref.: #20028]	rhamnose ChEBI	-
[Ref.: #68368]	sorbitol ChEBI	-	fermentation	* from API 20E
[Ref.: #20028]	sucrose ChEBI	+
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne, API 20E
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68379]	urea ChEBI	+	hydrolysis	* from API Coryne, API 20E
[Ref.: #20028]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #123704]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	yes	no

	Metabolite	Production
[Ref.: #123704]	indole ChEBI	no
[Ref.: #68368]	acetoin ChEBI	no	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #123704]	acetoin ChEBI	-
[Ref.: #123704]	glucose ChEBI		-
[Ref.: #68368]	acetoin ChEBI	-			* from API 20E
[Ref.: #68368]	indole ChEBI			-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #123704]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym, API Coryne
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym, API Coryne
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #123704]	amylase	-
[Ref.: #68368]	arginine dihydrolase	+	3.5.3.6	* from API 20E
[Ref.: #123704]	beta-galactosidase	+	3.2.1.23
[Ref.: #68379]	beta-galactosidase	+	3.2.1.23	* from API Coryne
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym, API 20E
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym, API Coryne
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym, API Coryne
[Ref.: #123704]	caseinase	-	3.4.21.50
[Ref.: #123704]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #123704]	DNase	-
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #123704]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #123704]	gelatinase	-
[Ref.: #68379]	gelatinase	-		* from API Coryne, API 20E
[Ref.: #123704]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #123704]	lipase	-
[Ref.: #68382]	lipase (C 14)	+		* from API zym
[Ref.: #123704]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68368]	lysine decarboxylase	+	4.1.1.18	* from API 20E
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym, API Coryne
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #123704]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #68368]	ornithine decarboxylase	+	4.1.1.17	* from API 20E
[Ref.: #123704]	oxidase	-
[Ref.: #123704]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #123704]	tryptophan deaminase	-
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #123704]	tween esterase	+
[Ref.: #123704]	urease	-	3.5.1.5
[Ref.: #68379]	urease	+	3.5.1.5	* from API Coryne, API 20E
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #20028]	613	-	+	+	+	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #123704]	1828	not determinedn.d.	+	+	+	+	+	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	+	+	+	-	-	-	-	-	+	+	+	+	+	-	-	-	-	+	-	-	-	-	-	-	-	+	+	-	-	+	-	-	+	-	-	+	+	+	-	-	-	-	-	+	-	-	-	-	+	-	-	+	-	+	-	+	+	-	-	-	+	-	+	-	+	+	+	+	+	+	+	-	+	+	-

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #20028]	392	-	-	+	+	-	+	+	-	+	+	-	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #123704]	9794	-	+	+	+	+	+	-	-	-	-	+	+	-	-	-	+	+	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #11496]	Sample type/isolated from	clinical material; blood culture of a patient with cardiac pacemaker implants
[Ref.: #11496]	Geographic location (country and/or sea, region)	Bochum
[Ref.: #11496]	Country	Germany
[Ref.: #11496]	Country ISO 3 Code	DEU
[Ref.: #11496]	Continent	Europe

[Ref.: #54294]	Sample type/isolated from	Human blood

[Ref.: #67770]	Sample type/isolated from	Blood culture from a 62-year-old woman who had cardiac pacemaker implants

[Ref.: #123704]	Sample type/isolated from	Human, Blood
* marker position based on {}

Isolation sources categories

#Infection	#Medical environment	#Clinic
#Infection	#Patient	#Blood culture

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence Y12246 (>99% sequence identity) for Tsukamurella from Microbeatlas

Aquatic Samples	2978
Soil Samples	3431
Animal Samples	5160
Plant Samples	790
Total Samples	12359

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #11496]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #20028]	Biosafety level	2	German classification
[Ref.: #123704]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Tsukamurella tyrosinosolvens 16S rRNA gene, isolate D-1397	Y12246	1460	GenBank ENA	57704 tax ID
[Ref.: #20218]	Tsukamurella tyrosinosolvens strain DSM 44234 16S ribosomal RNA, complete sequence	AY238514	1512	GenBank ENA	57704 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Tsukamurella tyrosinosolvens CCUG 38499	GCA_001575155	contig	GenBank ENA	57704 tax ID
[Ref.: #67770]	Tsukamurella tyrosinosolvens DSM 44234	GCA_900104775	contig	GenBank ENA	57704 tax ID
[Ref.: #66792]	Tsukamurella tyrosinosolvens strain CCUG 38499	57704.13	wgs	PATRIC	57704 tax ID	*
[Ref.: #66792]	Tsukamurella tyrosinosolvens strain DSM 44234	57704.16	wgs	PATRIC	57704 tax ID	*
[Ref.: #66792]	Tsukamurella tyrosinosolvens strain NCTC13231	57704.19	complete	PATRIC	57704 tax ID	*
[Ref.: #66792]	Tsukamurella tyrosinosolvens DSM 44234	2639762617	draft	JGI IMG/M	57704 tax ID	*

[Ref.: #11496]	GC-content	71.2 mol%	sequence analysis
[Ref.: #67770]	GC-content	71.2 mol%	genome sequence analysis
[Ref.: #67770]	GC-content	73.6 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Tsukamurella tyrosinosolvens strain NCTC13231 PATRIC: 57704.19
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	91	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Tsukamurella tyrosinosolvens NCTC13231 NCBI: GCA_900637875.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	89.191	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	97.564	yes
[Ref.: #69480]	aerobic	aerobicⓘ	yes	89.612	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	59.842	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	95.577	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	89.75	no

Availability in culture collections External links

[Ref.: #11496]

Culture collection no.

DSM 44234, CCUG 38499, CIP 106771, JCM 10112, IMMIB D-1397, IFM 0810, KCTC 19177, KCTC 9965, NCTC 13231, PCM 2579

[Ref.: #86101]

SI-ID 50526

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Tsukamurella soli sp. nov., isolated from soil.	Weon HY, Yoo SH, Anandham R, Schumann P, Kroppenstedt RM, Kwon SW, Stackebrandt E	Int J Syst Evol Microbiol	10.1099/ijs.0.014852-0	2009	*
Phylogeny	Tsukamurella carboxydivorans sp. nov., a carbon monoxide-oxidizing actinomycete.	Park SW, Kim SM, Park ST, Kim YM	Int J Syst Evol Microbiol	10.1099/ijs.0.005959-0	2009	*
Phylogeny	Tsukamurella tyrosinosolvens sp. nov.	Yassin AF, Rainey FA, Burghardt J, Brzezinka H, Schmitt S, Seifert P, Zimmermann O, Mauch H, Gierth D, Lux I, Schaal KP	Int J Syst Bacteriol	10.1099/00207713-47-3-607	1997	*

References

#11496

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44234

#20028

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#42109 ; Curators of the CIP;
#54294 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 38499

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#86101

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID50526.1 )

#123704 Collection of Institut Pasteur ; Curators of the CIP; CIP 106771
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Tsukamurella tyrosinosolvens in external resources:
SILVA
BRENDA
PANGAEA
GBIF

Tsukamurella tyrosinosolvens strain NCTC13231

Tsukamurella tyrosinosolvens NCTC13231

Change proposal

Change proposal