Strain identifier

BacDive ID: 17069

Type strain: Yes

Species: Thermotoga petrophila

Strain Designation: RKU-10

Culture col. no.: DSM 13996, JCM 10882, ATCC BAA 489

Strain history: T. Maruyama RKU-10.

NCBI tax ID(s): 93929 (species)

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Thermotoga petrophila RKU-10 is an anaerobe, hyperthermophilic bacterium that was isolated from production fluid of an oil reservoir storage tank.

  1. anaerobe
  2. hyperthermophilic
  3. 16S sequence
  4. Bacteria
  5. genome sequence
  • Information on culture and growth conditions Culture and growth conditionsarrow_down
  • [Ref.: #5209] Culture medium
    THERMOTOGA PETROPHILA MEDIUM (DSMZ Medium 913)
    [Ref.: #5209] Culture medium growth Yes
    [Ref.: #5209] Culture medium link Medium recipe at MediaDive MediaDive
    [Ref.: #5209] Culture medium composition expand / minimize
    Temperatures Kind of temperaturearrow to sort Temperaturearrow to sort
    [Ref.: #5209] growth 80  °C
    [Ref.: #67770] growth 80  °C
     
    [Ref.: #5209] Temperature range hyperthermophilic
    [Ref.: #67770] Temperature range hyperthermophilic
  • Availability in culture collections External linksarrow_down
  • [Ref.: #5209] Culture collection no. DSM 13996, JCM 10882, ATCC BAA 489
    [Ref.: #20218] Associated Passport(s) in StrainInfo 163899, 163900
    Literature: Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries.
    Titlearrow to sort Authorsarrow to sort Journalarrow to sort DOIarrow to sort Yeararrow to sort Mesharrow to sort Topicarrow to sort Topic2arrow to sort
    Genome sequence of Thermotoga sp. strain RQ2, a hyperthermophilic bacterium isolated from a geothermally heated region of the seafloor near Ribeira Quente, the Azores. Swithers KS, DiPippo JL, Bruce DC, Detter C, Tapia R, Han S, Saunders E, Goodwin LA, Han J, Woyke T, Pitluck S, Pennacchio L, Nolan M, Mikhailova N, Lykidis A, Land ML, Brettin T, Stetter KO, Nelson KE, Gogarten JP, Noll KM J Bacteriol 10.1128/JB.05923-11 2011 Azores, Bacterial Proteins/genetics/metabolism, Base Sequence, Fructose/metabolism, *Genome, Bacterial, Hot Temperature, Molecular Sequence Data, Operon, Phosphotransferases/genetics/metabolism, Seawater/*microbiology, Thermotoga maritima/enzymology/*genetics/*isolation & purification/metabolism Genetics Metabolism *
    Cloning, purification, and characterization of xylose isomerase from Thermotoga naphthophila RKU-10. Fatima B, Aftab MN, Haq IU J Basic Microbiol 10.1002/jobm.201500589 2016 Aldose-Ketose Isomerases/*genetics, Amino Acid Sequence, *Cloning, Molecular, Electrophoresis, Polyacrylamide Gel, Enzyme Stability, Escherichia coli/genetics/metabolism, Fructose/metabolism, Glucose/metabolism, Hot Temperature, Models, Molecular, Molecular Docking Simulation, Sequence Analysis, DNA, Sequence Homology, Thermotoga neapolitana/*enzymology/genetics/*metabolism, Xylose/*metabolism Enzymology Metabolism *
    beta-Glucosidase from Thermotoga naphthophila RKU-10 for exclusive synthesis of galactotrisaccharides: Kinetics and thermodynamics insight into reaction mechanism. Yang J, Gao R, Zhou Y, Anankanbil S, Li J, Xie G, Guo Z Food Chem 10.1016/j.foodchem.2017.07.155 2017 Animals, Gram-Negative Anaerobic Straight, Curved, and Helical Rods/*enzymology, Kinetics, Molecular Docking Simulation, Oligosaccharides, Thermodynamics, beta-Galactosidase, beta-Glucosidase/*metabolism Enzymology Metabolism *
    Valorizing Dairy Waste: Thermophilic Biosynthesis of a Novel Ascorbic Acid Derivative. Yang J, Perez B, Anankanbil S, Li J, Zhou Y, Gao R, Guo Z J Agric Food Chem 10.1021/acs.jafc.7b03173 2017 Animals, Antioxidants/chemistry, Ascorbic Acid/*chemistry, Bacteria/*enzymology, Bacterial Proteins/*chemistry, Cattle, Enzyme Stability, Lactose/*chemistry, Milk/*chemistry, Oxidation-Reduction, Waste Products/*analysis, beta-Glucosidase/*chemistry Enzymology *
    Insight into kinetics and thermodynamics of a novel hyperstable GH family 10 endo-1,4-beta-xylanase (TnXynB) with broad substrates specificity cloned from Thermotoga naphthophilaRKU-10(T). Haq IU, Akram F Enzyme Microb Technol 10.1016/j.enzmictec.2019.04.009 2019 Cloning, Molecular, Endo-1,4-beta Xylanases/chemistry/*isolation & purification/*metabolism, Enzyme Stability, Gene Expression, Gram-Negative Anaerobic Straight, Curved, and Helical Rods/*enzymology, Hot Temperature, Hydrogen-Ion Concentration, Kinetics, Molecular Weight, Recombinant Proteins/chemistry/isolation & purification/metabolism, Substrate Specificity Enzymology Phylogeny *
    Overexpression and characterization of TnCel12B, a hyperthermophilic GH12 endo-1,4-beta-glucanase cloned from Thermotoga naphthophila RKU-10(T). Akram F, Haq IU Anal Biochem 10.1016/j.ab.2020.113741 2020 *Bacterial Proteins/chemistry/isolation & purification, *Cellulase/chemistry/isolation & purification, Cloning, Molecular, Industrial Microbiology, Thermotoga/enzymology/genetics Enzymology Phylogeny *
    Molecular dynamics simulation guided distal mutation of Thermotoga naphthophila beta-glucosidase for significantly enhanced synthesis of galactooligosaccharides and expanded product scope. Lyu J, Zhang J, Zhu J, Chen S, Han T, Zhang Y, Gao R, Xie G, Guo Z Int J Biol Macromol 10.1016/j.ijbiomac.2022.05.002 2022 *Lactose/chemistry, Molecular Dynamics Simulation, Mutation, Oligosaccharides/chemistry, Thermotoga, *beta-Glucosidase/chemistry *

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