Allobaculum fili (DSM 112814, 539, NCTC 14627)

Name: Allobaculum fili (DSM 112814, 539, NCTC 14627)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 170478

Type strain

Strain Designation 539

Culture col. no. DSM 112814 539 NCTC 14627

NCBI tax ID(s) 2834460

Special Collections DSMZ

History DSMZ <- M. R. de Zoete, University Medical Center Utrecht, Dept. of Med. Microbiol., The Netherlands; 539 <- T. A. Rice, Yale University, New Haven, USA {2018}

Links

Allobaculum fili 539 is a bacterium that was isolated from human feces.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 399573

NCTC 14627,DSM 112814

@ref 20215

Last LPSN update 2026-05-29 08:46:51

Domain Bacteria

Phylum Bacillota

Class Erysipelotrichia

Order Erysipelotrichales

Family Erysipelotrichaceae

Genus Allobaculum

Species Allobaculum fili

Full scientific name Allobaculum fili Van Muijlwijk et al. 2023

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
125280	FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a)		Medium recipe at MediaDive	Name: FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a) Composition: Fastidious Anaerobe Basal Broth 35.4 g/l Deionized water
125280	PYG MEDIUM (MODIFIED) (DSMZ Medium 104)		Medium recipe at MediaDive	Name: PYG MEDIUM (MODIFIED) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
125280	positive	growth	37

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
125280	human feces	Homo sapiens	Connecticut, New Haven	USA	USA	North America	41.3106	-72.9298 41.3106/-72.9298

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20215	Allobaculum fili 16S ribosomal RNA gene, partial sequence	MZ153115	1487		2834460

GC content

@ref	GC-content (mol%)	Method
125280	50.5	sequence analysis

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Allobaculum mucilyticum sp. nov. and Allobaculum fili sp. nov., isolated from the human intestinal tract.	van Muijlwijk GH, Rice TA, Flavell RA, Palm NW, de Zoete MR.	Int J Syst Evol Microbiol	10.1099/ijsem.0.005635	2023

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#125280	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 112814
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Allobaculum fili (DSM 112814, 539, NCTC 14627)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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