Name: Pyrobaculum organotrophum H10
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17025

Type strain:

Species: Pyrobaculum organotrophum

Strain Designation: H10

Culture col. no.: DSM 4185, JCM 9190

Strain history: DSM 4185 <-- K. O. Stetter and G. Huber H10.

NCBI tax ID(s): 2278 (species)

SI-ID 47808

DSM 4185, JCM 9190

Section

Pyrobaculum organotrophum H10 is an anaerobe, hyperthermophilic archaeon that was isolated from solfataric spring.

anaerobe
hyperthermophilic
16S sequence
Archaea

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Thermoproteota*
	Class	*Thermoprotei*
	Order	*Thermoproteales*
	Family	*Thermoproteaceae*
	Genus	*Pyrobaculum*
	Species	**Pyrobaculum organotrophum**
	Full Scientific Name (LPSN)	Pyrobaculum organotrophum Huber et al. 1988

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1611]

Culture medium

PYROBACULUM MEDIUM (DSMZ Medium 390)

[Ref.: #1611]

Culture medium growth

[Ref.: #1611]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1611]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1611]			growth	95 °C
[Ref.: #67770]			growth	95 °C

[Ref.: #1611]	Temperature range	hyperthermophilic
[Ref.: #67770]	Temperature range	hyperthermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #1611]

Oxygen tolerance

anaerobe

[Ref.: #67770]

Observation

quinones: MK-6(H₁₂), fully saturated cyclic menaquinone

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1611]	Sample type/isolated from	solfataric spring
[Ref.: #1611]	Geographic location (country and/or sea, region)	Grandalur
[Ref.: #1611]	Country	Iceland
[Ref.: #1611]	Country ISO 3 Code	ISL
[Ref.: #1611]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Gassed spring hole in Grandalur
[Ref.: #67770]	Country	Iceland
[Ref.: #67770]	Country ISO 3 Code	ISL
[Ref.: #67770]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Spring
#Environmental	#Terrestrial	#Volcanic

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1611]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #1611]	Pyrobaculum organotrophum gene for 16S rRNA, partial sequence, strain:JCM 9190	AB063647	1426	ENA	2278 tax ID

[Ref.: #1611]	GC-content	48.0 mol%
[Ref.: #1611]	GC-content	46.0 mol%
[Ref.: #67770]	GC-content	46 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	48 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #1611]

Culture collection no.

DSM 4185, JCM 9190

[Ref.: #86026]

SI-ID 47808

References

#1611

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4185

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#86026

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID47808.1 )

* These data were automatically processed and therefore are not curated

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