Natrinema salinisoli (JCM 30832, CGMCC 1.14945, SLN56)

Name: Natrinema salinisoli (JCM 30832, CGMCC 1.14945, SLN56)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 170236

Type strain

Strain Designation SLN56

Culture col. no. JCM 30832 CGMCC 1.14945 SLN56

NCBI tax ID(s) 2878535

Special Collections JCM

Links

Natrinema salinisoli SLN56 is a prokaryote of the family Natrialbaceae.

genome sequence

Name and taxonomic classification

SI-ID 131828

JCM 30832

@ref 20215

Last LPSN update 2026-02-09 11:41:12

Domain Archaea

Phylum Methanobacteriota

Class Halobacteria

Order Halobacteriales

Family Natrialbaceae

Genus Natrinema

Species Natrinema salinisoli

Full scientific name Natrinema salinisoli Bao et al. 2022

Morphology

Cell morphology

@ref	Motility	Confidence
125438		91

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	aerobe	92

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM2040520v1 assembly for Natrinema salinisoli SLN56	complete	GCA_020405205	2878535.3	8071119265	2878535	90.44

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Natrinema salinisoli SLN56
NCBI: GCA_020405205

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	83.80	no
125439	motility	BacteriaNetⓘ	yes	57.30	no
125439	gram_stain	BacteriaNetⓘ	negative	78.20	no
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	92.00	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Natrinema salinisoli SLN56
NCBI: GCA_020405205.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	77.57	no
125438	anaerobic	anaerobicⓘ	no	83.16	no
125438	aerobic	aerobicⓘ	yes	79.50	no
125438	spore-forming	spore-formingⓘ	no	85.33	no
125438	thermophilic	thermophileⓘ	no	76.75	no
125438	flagellated	motile2+ⓘ	no	91.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Natrinema halophilum sp. nov., Natrinema salinisoli sp. nov., Natrinema amylolyticum sp. nov. and Haloterrigena alkaliphila sp. nov., four extremely halophilic archaea isolated from salt mine, saline soil and salt lake.	Bao CX, Li SY, Xin YJ, Hou J, Cui HL	Int J Syst Evol Microbiol	10.1099/ijsem.0.005385	2022

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Natrinema salinisoli (JCM 30832, CGMCC 1.14945, SLN56)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_020405205

Genome-based predictions

Predictions

Literature

Literature

References

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