Name: Vulcanisaeta souniana IC-059
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17022

Type strain:

Species: Vulcanisaeta souniana

Strain Designation: IC-059

Culture col. no.: DSM 14430, JCM 11219, NBRC 100879

Strain history: T. Itoh IC-059.

NCBI tax ID(s): 1293586 (strain), 164452 (species)

SI-ID 101061

DSM 14430, JCM 11219, NBRC 100879

Other strains from Vulcanisaeta souniana

V. souniana JCM 14466

Section

Vulcanisaeta souniana IC-059 is an anaerobe, hyperthermophilic archaeon that was isolated from hot spring.

anaerobe
hyperthermophilic
16S sequence
Archaea
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Thermoproteota*
	Class	*Thermoprotei*
	Order	*Thermoproteales*
	Family	*Thermoproteaceae*
	Genus	*Vulcanisaeta*
	Species	**Vulcanisaeta souniana**
	Full Scientific Name (LPSN)	Vulcanisaeta souniana Itoh et al. 2002

Information on morphological and physiological properties Morphology

[Ref.: #5350]

Incubation period

2-3 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5350]

Culture medium

SULFOLOBUS MEDIUM (ANAEROBIC) (DSMZ Medium 88a)

[Ref.: #5350]

Culture medium growth

[Ref.: #5350]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5350]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5350]			growth	85 °C
[Ref.: #67770]			growth	85 °C

[Ref.: #5350]	Temperature range	hyperthermophilic
[Ref.: #67770]	Temperature range	hyperthermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #5350]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5350]	Sample type/isolated from	hot spring
[Ref.: #5350]	Geographic location (country and/or sea, region)	Kanagawa, Sounzan-onsen
[Ref.: #5350]	Country	Japan
[Ref.: #5350]	Country ISO 3 Code	JPN
[Ref.: #5350]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Hot spring water
[Ref.: #67770]	Geographic location (country and/or sea, region)	Sounzan, Kanagawa
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Thermal spring
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB063645 (>99% sequence identity) for Vulcanisaeta souniana from Microbeatlas

Aquatic Samples	10
Soil Samples
Animal Samples
Plant Samples
Total Samples	10

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5350]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Vulcanisaeta souniana gene for 16S rRNA, partial sequence, strain:IC-059	AB063645	1477	ENA	1293586 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Vulcanisaeta souniana JCM 11219	GCA_001316025	contig	GenBank	1293586 tax ID
[Ref.: #66792]	Vulcanisaeta souniana JCM 11219	GCA_014646555	contig	GenBank	1293586 tax ID	*
[Ref.: #66792]	Vulcanisaeta souniana JCM 11219	2681813013	draft	JGI IMG/M	1293586 tax ID	*
[Ref.: #66792]	Vulcanisaeta souniana JCM 11219	1293586.5	wgs	PATRIC	1293586 tax ID	*
[Ref.: #66792]	Vulcanisaeta souniana JCM 11219	1293586.8	wgs	PATRIC	1293586 tax ID	*

[Ref.: #5350]

GC-content

44.9 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #5350]

Culture collection no.

DSM 14430, JCM 11219, NBRC 100879

[Ref.: #86023]

SI-ID 101061

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Vulcanisaeta thermophila sp. nov., a hyperthermophilic and acidophilic crenarchaeon isolated from solfataric soil.	Yim KJ, Cha IT, Rhee JK, Song HS, Hyun DW, Lee HW, Kim D, Kim KN, Nam YD, Seo MJ, Bae JW, Roh SW	Int J Syst Evol Microbiol	10.1099/ijs.0.065862-0	2014	*
Phylogeny	Vulcanisaeta distributa gen. nov., sp. nov., and Vulcanisaeta souniana sp. nov., novel hyperthermophilic, rod-shaped crenarchaeotes isolated from hot springs in Japan.	Itoh T, Suzuki K, Nakase T	Int J Syst Evol Microbiol	10.1099/00207713-52-4-1097	2002	*

References

#5350

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14430

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#86023

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID101061.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Vulcanisaeta souniana in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF