Gymnodinialimonas ceratoperidinii (KCTC 82770, GDMCC 1.2729, J12C1-MA-4)

Name: Gymnodinialimonas ceratoperidinii (KCTC 82770, GDMCC 1.2729, J12C1-MA-4)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 170094

Type strain

Strain Designation J12C1-MA-4

Culture col. no. KCTC 82770 GDMCC 1.2729 J12C1-MA-4

NCBI tax ID(s) 2856823

Special Collections KCTC

Links

Gymnodinialimonas ceratoperidinii J12C1-MA-4 is a bacterium of the family Paracoccaceae.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 26635

KCTC 82770

@ref 20215

Last LPSN update 2026-05-29 08:46:45

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodobacterales

Family Paracoccaceae

Genus Gymnodinialimonas

Species Gymnodinialimonas ceratoperidinii

Full scientific name Gymnodinialimonas ceratoperidinii Jiang et al. 2022

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	95.5

Culture and growth conditions

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		98.926

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1929785v1 assembly for Gymnodinialimonas ceratoperidinii J12C1-MA-4	complete	GCA_019297855	2856823.3	8073711438	2856823	99.13

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20215	Gymnodinialimonas ceratoperidinii strain J12C1-MA-4 16S ribosomal RNA gene, partial sequence	MZ457320	1402		2856823

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1929785v1 assembly for Gymnodinialimonas ceratoperidinii J12C1-MA-4
NCBI: GCA_019297855

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	98.93	no
125439	motility	BacteriaNetⓘ	yes	56.22	no
125439	gram_stain	BacteriaNetⓘ	negative	84.50	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	74.69	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Gymnodinialimonas ceratoperidinii J12C1-MA-4
NCBI: GCA_019297855.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	95.50	no
125438	anaerobic	anaerobicⓘ	no	94.35	no
125438	aerobic	aerobicⓘ	yes	88.59	no
125438	spore-forming	spore-formingⓘ	no	86.66	no
125438	thermophilic	thermophileⓘ	no	95.25	no
125438	flagellated	motile2+ⓘ	no	55.70	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Gymnodinialimonas ceratoperidinii gen. nov., sp. nov., isolated from rare marine dinoflagellate Ceratoperidinium margalefii.	Jiang Y, Peng Y, Shin HH, Kim HJ, Kim KH, Jiang L, Lee J, Li Z	Arch Microbiol	10.1007/s00203-022-02797-x	2022

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Gymnodinialimonas ceratoperidinii (KCTC 82770, GDMCC 1.2729, J12C1-MA-4)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Physiology and metabolism

Spore formation

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_019297855

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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