Huaxiibacter chinensis (155047, JCM 35262, GDMCC 1.2980)

Name: Huaxiibacter chinensis (155047, JCM 35262, GDMCC 1.2980)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 170077

Type strain

Strain Designation 155047

Culture col. no. 155047 JCM 35262 GDMCC 1.2980

NCBI tax ID(s) 2899785

Special Collections JCM

Links

Huaxiibacter chinensis 155047 is a prokaryote of the family Enterobacteriaceae.

genome sequence 16S sequence

Name and taxonomic classification

SI-ID 132347

JCM 35262

@ref 20215

Last LPSN update 2026-02-09 11:41:10

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Enterobacteriaceae

Genus Huaxiibacter

Species Huaxiibacter chinensis

Full scientific name Huaxiibacter chinensis He et al. 2022

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	97.1
125438	negative	100

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	aerobe	91.3

Spore formation

@ref	Spore formation	Confidence
125439		96.7

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM2217198v1 assembly for Huaxiibacter chinensis 155047	contig	GCA_022171985	2899785.5	8046656724	2899785	60.19

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20215	Huaxiibacter chinensis strain 155047 16S ribosomal RNA gene, partial sequence	OL712205	1536		2899785

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Huaxiibacter chinensis 155047
NCBI: GCA_022171985

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	96.70	no
125439	motility	BacteriaNetⓘ	yes	50.30	no
125439	gram_stain	BacteriaNetⓘ	negative	97.10	no
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	91.30	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Huaxiibacter chinensis 155047
NCBI: GCA_022171985.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	100.00	no
125438	anaerobic	anaerobicⓘ	no	95.17	no
125438	aerobic	aerobicⓘ	no	62.16	no
125438	spore-forming	spore-formingⓘ	no	88.93	no
125438	thermophilic	thermophileⓘ	no	99.50	no
125438	flagellated	motile2+ⓘ	yes	79.39	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Huaxiibacter chinensis gen. nov., sp. nov., recovered from human sputum.	He Y, Wu S, Feng Y, Zong Z	Int J Syst Evol Microbiol	10.1099/ijsem.0.005484	2022

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Huaxiibacter chinensis (155047, JCM 35262, GDMCC 1.2980)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_022171985

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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