Actinomadura bangladeshensis 3-46-b(3) | Type strain | DSM 45347, JCM 13933, MTCC 8057

Caption:

Medium 554 28°C

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

Culture medium

N-Z-AMINE-MEDIUM (DSMZ Medium 554)

Culture medium growth

Culture medium link

Culture medium composition

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

Culture medium growth

Culture medium link

Culture medium composition

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

Culture medium growth

Culture medium link

Culture medium composition

Culture medium

BHI MEDIUM (DSMZ Medium 215)

Culture medium growth

Culture medium link

Culture medium composition

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

Culture medium growth

Culture medium link

Culture medium composition

What are isolation sources categories?

		Temperature
[Ref.: #16341]	growth	28 °C
[Ref.: #32467]	growth	20-45 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #16341]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #32467]			growth	05-09

Information on physiology and metabolism Physiology and metabolism

[Ref.: #32467]

Oxygen tolerance

aerobe

[Ref.: #32467]	Ability of spore formation	yes
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #32467]		NaCl		growth	4	%

[Ref.: #67770]

Observation

quinones: MK-9(H₆), MK-9(H₈), MK-9(H₄)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #32467]	arabinose ChEBI	+	carbon source
[Ref.: #32467]	cellobiose ChEBI	+	carbon source
[Ref.: #32467]	fructose ChEBI	+	carbon source
[Ref.: #32467]	glycerol ChEBI	+	carbon source
[Ref.: #32467]	mannitol ChEBI	+	carbon source
[Ref.: #32467]	sucrose ChEBI	+	carbon source
[Ref.: #32467]	xylose ChEBI	+	carbon source

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16341]	Sample type/isolated from	sandy soil
[Ref.: #16341]	Geographic location (country and/or sea, region)	Chokoria, Cox's Bazar
[Ref.: #16341]	Country	Bangladesh
[Ref.: #16341]	Country ISO 3 Code	BGD
[Ref.: #16341]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Sandy soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Chokoria, Cox's Bazar
[Ref.: #67770]	Country	Bangladesh
[Ref.: #67770]	Country ISO 3 Code	BGD
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Sandy
#Environmental	#Terrestrial	#Soil

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16341]	Actinomadura bangladeshensis gene for 16S rRNA, partial sequence	AB331652	1497	ENA	453573 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Actinomadura bangladeshensis DSM 45347	GCA_004348335	contig	GenBank	453573 tax ID
[Ref.: #66792]	Actinomadura bangladeshensis strain DSM 45347	453573.3	wgs	PATRIC	453573 tax ID	*
[Ref.: #66792]	Actinomadura bangladeshensis DSM 45347	2866640805	draft	JGI IMG/M	453573 tax ID	*

[Ref.: #16341]	GC-content	70.27 mol%
[Ref.: #67770]	GC-content	70.27 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Actinomadura bangladeshensis strain DSM 45347 PATRIC: 453573.4
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Actinomadura bangladeshensis strain DSM 45347 PATRIC: 453573.3
[Ref.: #69480]	gram-positive	yes	90.165	yes
[Ref.: #69480]	anaerobic	no	97.782	no
[Ref.: #69480]	halophile	no	88.645	no
[Ref.: #69480]	spore-forming	yes	91.161	yes
[Ref.: #69480]	glucose-util	yes	87.773	no
[Ref.: #69480]	aerobic	yes	84.192	yes
[Ref.: #69480]	flagellated	no	98.277	no
[Ref.: #69480]	thermophile	no	96.315	yes
[Ref.: #69480]	motile	no	91.179	no
[Ref.: #69480]	glucose-ferment	no	91.707	no

Availability in culture collections External links