Serpens gallinarum (DSM 112377, Sa2CUA2)

Name: Serpens gallinarum (DSM 112377, Sa2CUA2)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 169781

Type strain

Strain Designation Sa2CUA2

Culture col. no. DSM 112377 Sa2CUA2

NCBI tax ID(s) 2763075

Special Collections DSMZ DZIF

History <- R. Gilroy, Quadram Institute Bioscience, Norwich, UK; Sa2CUA2

Links

Serpens gallinarum Sa2CUA2 is a bacterium that was isolated from chicken faeces.

genome sequence Bacteria

Name and taxonomic classification

SI-ID 401841

NCTC:14618,DSM 112377

@ref 20215

Last LPSN update 2026-02-09 11:41:06

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Pseudomonadaceae

Genus Serpens

Species Serpens gallinarum

Full scientific name Serpens gallinarum Pallen 2024

Synonyms (1)

"Serpens gallinarum"

Morphology

Cell morphology

@ref	Confidence	Gram stain
125439	90.9
125439	99.6	negative
125438	97.494	negative

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
69208	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)		Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
69208	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)		Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
69208	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	96

Spore formation

@ref	Spore formation	Confidence
125439		99.3

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
69208	chicken faeces	Norwich	United Kingdom	GBR	Europe

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1483676v1 assembly for Serpens gallinarum Sa2CUA2	scaffold	GCA_014836765	2763075.3	8011335247	2763075	69.81

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Serpens gallinarum Sa2CUA2
NCBI: GCA_014836765

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.30	no
125439	motility	BacteriaNetⓘ	yes	90.90	no
125439	gram_stain	BacteriaNetⓘ	negative	99.60	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.00	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Serpens gallinarum Sa2CUA2
NCBI: GCA_014836765.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	97.49	no
125438	anaerobic	anaerobicⓘ	no	97.79	no
125438	aerobic	aerobicⓘ	yes	88.58	no
125438	spore-forming	spore-formingⓘ	no	85.87	no
125438	thermophilic	thermophileⓘ	no	99.00	no
125438	flagellated	motile2+ⓘ	yes	86.06	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Valid publication of names for bacterial species from the chicken gut.	Pallen MJ.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006445	2024

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69208	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 112377
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Serpens gallinarum (DSM 112377, Sa2CUA2)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_014836765

Genome-based predictions

Predictions

Literature

Literature

References

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