Name: Adlercreutzia murintestinalis SPF44-BHI-1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 169743

Type strain:

Species: Adlercreutzia murintestinalis

Strain Designation: SPF44-BHI-1, CLA-AA-M17

Culture col. no.: DSM 112345

Strain history: <- T. Clavel, RWTH Aachen; CLA-AA-M17

NCBI tax ID(s): 2941325 (species)

Special Collections

Section

When using BacDive for research please cite our paper

Adlercreutzia murintestinalis SPF44-BHI-1 is a bacterium that was isolated from gut content; SPF, C57BL/6J mouse.

Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Actinomycetota*
	Class	*Coriobacteriia*
	Order	*Eggerthellales*
	Family	*Eggerthellaceae*
	Genus	*Adlercreutzia*
	Species	"Adlercreutzia murintestinalis"
	Full Scientific Name (LPSN)	Adlercreutzia murintestinalis Afrizal et al. 2022

Information on morphological and physiological properties Morphology

[Ref.: #125439]	Gram stain	negative Confidence in %90.4

[Ref.: #125438]	Motility	no Confidence in %92.566

Information on culture and growth conditions Culture and growth conditions

[Ref.: #69162]

Culture medium

FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a)

[Ref.: #69162]

Culture medium growth

[Ref.: #69162]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #69162]

Culture medium

BHI MEDIUM (DSMZ Medium 215)

[Ref.: #69162]

Culture medium growth

[Ref.: #69162]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #69162]

Culture medium

FASTIDIOUS ANAEROBE AGAR (DSMZ Medium 1203)

[Ref.: #69162]

Culture medium growth

[Ref.: #69162]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #69162]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #125439]

Ability of spore formation

no Confidence in %96.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69162]	Sample type/isolated from	gut content; SPF, C57BL/6J mouse
[Ref.: #69162]	Geographic location (country and/or sea, region)	Aachen
[Ref.: #69162]	Country	Germany
[Ref.: #69162]	Country ISO 3 Code	DEU
[Ref.: #69162]	Continent	Europe
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Adlercreutzia sp. DSM 112345 Adlercreutzia_sp_nov1_DSM112345	GCA_943192905	contig	GenBank ENA	2941325 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Model	Trait	Prediction	Confidence in %	In training data
	Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Adlercreutzia sp. DSM 112345 Adlercreutzia_sp_nov1_DSM112345 NCBI: GCA_943192905.1
[Ref.: #125438]	aerobic	aerobicⓘ	no	94.316	no
[Ref.: #125438]	gram-positive	gram-positiveⓘ	yes	81.122	no
[Ref.: #125438]	anaerobic	anaerobicⓘ	yes	88.522	no
[Ref.: #125438]	spore-forming	spore-formingⓘ	no	84.734	no
[Ref.: #125438]	thermophile	thermophilicⓘ	no	85.727	yes
[Ref.: #125438]	motile2+	flagellatedⓘ	no	92.566	no

	Model	Trait	Prediction	Confidence in %
	Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Adlercreutzia sp. DSM 112345 Adlercreutzia_sp_nov1_DSM112345 NCBI: GCA_943192905
[Ref.: #125439]	BacteriaNet	spore_formationⓘ	no	96.5
[Ref.: #125439]	BacteriaNet	motilityⓘ	yes	74.5
[Ref.: #125439]	BacteriaNet	gram_stainⓘ	negative	90.4
[Ref.: #125439]	BacteriaNet	oxygen_toleranceⓘ	facultative aerobe	76.8

Availability in culture collections External links

[Ref.: #69162]

Culture collection no.

DSM 112345

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69162

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 112345

#125438

Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )

#125439

Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

* These data were automatically processed and therefore are not curated

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Adlercreutzia sp. DSM 112345 Adlercreutzia_sp_nov1_DSM112345

Adlercreutzia sp. DSM 112345 Adlercreutzia_sp_nov1_DSM112345

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Change proposal